RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 RTL3Q8N8U3 475 aaKnown RBP2.52□□□□□ -2.01
HMGB1P33-201ENST00000563485 TC2NQ8N9U0 490 aa2.52□□□□□ -2.01
HMGB1P33-201ENST00000563485 KLHL30-AS1Q8NEE0 82 aa2.52□□□□□ -2.01
HMGB1P33-201ENST00000563485 SSC4DQ8WTU2 575 aa2.52□□□□□ -2.01
HMGB1P33-201ENST00000563485 ZDHHC19Q8WVZ1 309 aaPredicted RBP2.52□□□□□ -2.01
HMGB1P33-201ENST00000563485 ROBO4Q8WZ75 1007 aa2.52□□□□□ -2.01
HMGB1P33-201ENST00000563485 PROX1Q92786 737 aa2.52□□□□□ -2.01
HMGB1P33-201ENST00000563485 TSACCQ96A04 125 aaPredicted RBP2.52□□□□□ -2.01
HMGB1P33-201ENST00000563485 OTUB1Q96FW1 271 aaPredicted RBP2.52□□□□□ -2.01
HMGB1P33-201ENST00000563485 MUS81Q96NY9 551 aa2.52□□□□□ -2.01
HMGB1P33-201ENST00000563485 FEVQ99581 238 aa2.52□□□□□ -2.01
HMGB1P33-201ENST00000563485 CCDC28BQ9BUN5 200 aa2.52□□□□□ -2.01
HMGB1P33-201ENST00000563485 JPT2Q9H910 190 aa2.52□□□□□ -2.01
HMGB1P33-201ENST00000563485 GSN-AS1Q9NRJ2 163 aa2.52□□□□□ -2.01
HMGB1P33-201ENST00000563485 CHORDC1Q9UHD1 332 aaPredicted RBP2.52□□□□□ -2.01
HMGB1P33-201ENST00000563485 RALGAPA1Q6GYQ0 2036 aa2.51□□□□□ -2.01
HMGB1P33-201ENST00000563485 TRAV24A0A0B4J272 114 aa2.51□□□□□ -2.01
HMGB1P33-201ENST00000563485 hCG_1809904A0A1W2PP81 198 aa2.51□□□□□ -2.01
HMGB1P33-201ENST00000563485 A0A1W2PPE2 198 aa2.51□□□□□ -2.01
HMGB1P33-201ENST00000563485 A0A1W2PR64 198 aa2.51□□□□□ -2.01
HMGB1P33-201ENST00000563485 RTCAO00442 366 aaKnown RBP2.51□□□□□ -2.01
HMGB1P33-201ENST00000563485 TRAFD1O14545 582 aaPredicted RBP2.51□□□□□ -2.01
HMGB1P33-201ENST00000563485 RPS6KA5O75582 802 aa2.51□□□□□ -2.01
HMGB1P33-201ENST00000563485 CETN2P41208 172 aa2.51□□□□□ -2.01
HMGB1P33-201ENST00000563485 NDST2P52849 883 aa2.51□□□□□ -2.01
HMGB1P33-201ENST00000563485 NDUFV3P56181 108 aaKnown RBP2.51□□□□□ -2.01
HMGB1P33-201ENST00000563485 PTPRCAPQ14761 206 aa2.51□□□□□ -2.01
HMGB1P33-201ENST00000563485 C3AR1Q16581 482 aa2.51□□□□□ -2.01
HMGB1P33-201ENST00000563485 CYB5D1Q6P9G0 228 aa2.51□□□□□ -2.01
HMGB1P33-201ENST00000563485 REG3GQ6UW15 175 aa2.51□□□□□ -2.01
HMGB1P33-201ENST00000563485 DET1Q7L5Y6 550 aa2.51□□□□□ -2.01
HMGB1P33-201ENST00000563485 CENPVQ7Z7K6 275 aaPredicted RBP2.51□□□□□ -2.01
HMGB1P33-201ENST00000563485 ADCK1Q86TW2 530 aa2.51□□□□□ -2.01
HMGB1P33-201ENST00000563485 FGFRL1Q8N441 504 aa2.51□□□□□ -2.01
HMGB1P33-201ENST00000563485 RYBPQ8N488 228 aaPredicted RBP2.51□□□□□ -2.01
HMGB1P33-201ENST00000563485 SPPL2AQ8TCT8 520 aa2.51□□□□□ -2.01
HMGB1P33-201ENST00000563485 CHURC1Q8WUH1 139 aa2.51□□□□□ -2.01
HMGB1P33-201ENST00000563485 NSMAFQ92636 917 aa2.51□□□□□ -2.01
HMGB1P33-201ENST00000563485 BTBD9Q96Q07 612 aa2.51□□□□□ -2.01
HMGB1P33-201ENST00000563485 UBAC1Q9BSL1 405 aa2.51□□□□□ -2.01
HMGB1P33-201ENST00000563485 DNAJC4Q9NNZ3 241 aa2.51□□□□□ -2.01
HMGB1P33-201ENST00000563485 TBC1D13Q9NVG8 400 aa2.51□□□□□ -2.01
HMGB1P33-201ENST00000563485 MAGED1Q9Y5V3 778 aaPredicted RBP2.51□□□□□ -2.01
HMGB1P33-201ENST00000563485 KLF2Q9Y5W3 355 aaPredicted RBP2.51□□□□□ -2.01
HMGB1P33-201ENST00000563485 RTL8CO15255 209 aa2.5□□□□□ -2.01
HMGB1P33-201ENST00000563485 OGTO15294 1046 aa2.5□□□□□ -2.01
HMGB1P33-201ENST00000563485 AP5Z1O43299 807 aa2.5□□□□□ -2.01
HMGB1P33-201ENST00000563485 SPRY1O43609 319 aaPredicted RBP2.5□□□□□ -2.01
HMGB1P33-201ENST00000563485 CYTIPO60759 359 aa2.5□□□□□ -2.01
HMGB1P33-201ENST00000563485 KLK2P20151 261 aa2.5□□□□□ -2.01
HMGB1P33-201ENST00000563485 EDNRAP25101 427 aa2.5□□□□□ -2.01
HMGB1P33-201ENST00000563485 PCGF2P35227 344 aa2.5□□□□□ -2.01
HMGB1P33-201ENST00000563485 CCR3P51677 355 aa2.5□□□□□ -2.01
HMGB1P33-201ENST00000563485 PRELPP51888 382 aa2.5□□□□□ -2.01
HMGB1P33-201ENST00000563485 KIAA0141Q14154 515 aaPredicted RBP2.5□□□□□ -2.01
HMGB1P33-201ENST00000563485 SIM2Q14190 667 aaPredicted RBP2.5□□□□□ -2.01
HMGB1P33-201ENST00000563485 LETM2Q2VYF4 491 aa2.5□□□□□ -2.01
HMGB1P33-201ENST00000563485 ATP1A1-AS1Q5TC04 95 aa2.5□□□□□ -2.01
HMGB1P33-201ENST00000563485 Q8N7P7 452 aa2.5□□□□□ -2.01
HMGB1P33-201ENST00000563485 GBP7Q8N8V2 638 aaPredicted RBP2.5□□□□□ -2.01
HMGB1P33-201ENST00000563485 SLC4A11Q8NBS3 891 aa2.5□□□□□ -2.01
HMGB1P33-201ENST00000563485 RHOXF1Q8NHV9 184 aa2.5□□□□□ -2.01
HMGB1P33-201ENST00000563485 RPLP0P6Q8NHW5 317 aa2.5□□□□□ -2.01
HMGB1P33-201ENST00000563485 SECISBP2LQ93073 1101 aaKnown RBP2.5□□□□□ -2.01
HMGB1P33-201ENST00000563485 LINC00615Q96LM1 132 aaPredicted RBP2.5□□□□□ -2.01
HMGB1P33-201ENST00000563485 RAVER2Q9HCJ3 691 aaKnown RBP2.5□□□□□ -2.01
HMGB1P33-201ENST00000563485 TNFRSF19Q9NS68 423 aa2.5□□□□□ -2.01
HMGB1P33-201ENST00000563485 TXNDC16Q9P2K2 825 aa2.5□□□□□ -2.01
HMGB1P33-201ENST00000563485 ANAPC2Q9UJX6 822 aa2.5□□□□□ -2.01
HMGB1P33-201ENST00000563485 VSIG4Q9Y279 399 aa2.5□□□□□ -2.01
HMGB1P33-201ENST00000563485 SNX8Q9Y5X2 465 aa2.5□□□□□ -2.01
HMGB1P33-201ENST00000563485 ATRXP46100 2492 aa2.49□□□□□ -2.01
HMGB1P33-201ENST00000563485 A0A087WZ39 114 aa2.49□□□□□ -2.01
HMGB1P33-201ENST00000563485 EDDM13A0A1B0GTR0 161 aa2.49□□□□□ -2.01
HMGB1P33-201ENST00000563485 ARHGEF33A8MVX0 844 aa2.49□□□□□ -2.01
HMGB1P33-201ENST00000563485 CLDN4O14493 209 aa2.49□□□□□ -2.01
HMGB1P33-201ENST00000563485 SAP30O75446 220 aa2.49□□□□□ -2.01
HMGB1P33-201ENST00000563485 PRDM1O75626 825 aa2.49□□□□□ -2.01
HMGB1P33-201ENST00000563485 SLCO2B1O94956 709 aa2.49□□□□□ -2.01
HMGB1P33-201ENST00000563485 DUSP5Q16690 384 aa2.49□□□□□ -2.01
HMGB1P33-201ENST00000563485 UPP1Q16831 310 aa2.49□□□□□ -2.01
HMGB1P33-201ENST00000563485 TMEM266Q2M3C6 531 aa2.49□□□□□ -2.01
HMGB1P33-201ENST00000563485 FAM106AQ4KMX7 169 aa2.49□□□□□ -2.01
HMGB1P33-201ENST00000563485 BMP2KLQ5H9B9 411 aa2.49□□□□□ -2.01
HMGB1P33-201ENST00000563485 BAIAP2L2Q6UXY1 529 aa2.49□□□□□ -2.01
HMGB1P33-201ENST00000563485 CATSPER3Q86XQ3 398 aa2.49□□□□□ -2.01
HMGB1P33-201ENST00000563485 ZBED8Q8IZ13 594 aa2.49□□□□□ -2.01
HMGB1P33-201ENST00000563485 SLC22A15Q8IZD6 547 aa2.49□□□□□ -2.01
HMGB1P33-201ENST00000563485 TTC30BQ8N4P2 665 aa2.49□□□□□ -2.01
HMGB1P33-201ENST00000563485 CD177Q8N6Q3 437 aa2.49□□□□□ -2.01
HMGB1P33-201ENST00000563485 ANKRD13CQ8N6S4 541 aa2.49□□□□□ -2.01
HMGB1P33-201ENST00000563485 OR4C15Q8NGM1 316 aa2.49□□□□□ -2.01
HMGB1P33-201ENST00000563485 RFT1Q96AA3 541 aa2.49□□□□□ -2.01
HMGB1P33-201ENST00000563485 CNOT6LQ96LI5 555 aaKnown RBP2.49□□□□□ -2.01
HMGB1P33-201ENST00000563485 NEDD4LQ96PU5 975 aa2.49□□□□□ -2.01
HMGB1P33-201ENST00000563485 NDNQ99608 321 aa2.49□□□□□ -2.01
HMGB1P33-201ENST00000563485 APOL6Q9BWW8 343 aa2.49□□□□□ -2.01
HMGB1P33-201ENST00000563485 OCR1Q9BZK8 76 aa2.49□□□□□ -2.01
HMGB1P33-201ENST00000563485 SLITRK2Q9H156 845 aa2.49□□□□□ -2.01
HMGB1P33-201ENST00000563485 SDCBP2Q9H190 292 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms