RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 RIMKLAQ8IXN7 391 aa17.32■□□□□ 0.36
COMMD4-208ENST00000563220 DPP10Q8N608 796 aa17.32■□□□□ 0.36
COMMD4-208ENST00000563220 ENDOVQ8N8Q3 282 aaKnown RBP17.32■□□□□ 0.36
COMMD4-208ENST00000563220 OR2L3Q8NG85 312 aa17.32■□□□□ 0.36
COMMD4-208ENST00000563220 GFM2Q969S9 779 aaKnown RBP17.32■□□□□ 0.36
COMMD4-208ENST00000563220 NT5DC2Q9H857 520 aa17.32■□□□□ 0.36
COMMD4-208ENST00000563220 SLC6A20Q9NP91 592 aa17.32■□□□□ 0.36
COMMD4-208ENST00000563220 MRPS30Q9NP92 439 aaKnown RBP17.32■□□□□ 0.36
COMMD4-208ENST00000563220 SPAG4Q9NPE6 437 aa17.32■□□□□ 0.36
COMMD4-208ENST00000563220 PPT2Q9UMR5 302 aa17.32■□□□□ 0.36
COMMD4-208ENST00000563220 PCM1Q15154 2024 aa17.32■□□□□ 0.36
COMMD4-208ENST00000563220 ABCA7Q8IZY2 2146 aa17.32■□□□□ 0.36
COMMD4-208ENST00000563220 CSF2P04141 144 aa17.31■□□□□ 0.36
COMMD4-208ENST00000563220 PGRP06401 933 aa17.31■□□□□ 0.36
COMMD4-208ENST00000563220 SLC7A2P52569 658 aa17.31■□□□□ 0.36
COMMD4-208ENST00000563220 UBE2IP63279 158 aaKnown RBP17.31■□□□□ 0.36
COMMD4-208ENST00000563220 GPR18Q14330 331 aa17.31■□□□□ 0.36
COMMD4-208ENST00000563220 SPIN4Q56A73 249 aa17.31■□□□□ 0.36
COMMD4-208ENST00000563220 C6orf163Q5TEZ5 329 aa17.31■□□□□ 0.36
COMMD4-208ENST00000563220 ADCK2Q7Z695 626 aa17.31■□□□□ 0.36
COMMD4-208ENST00000563220 FAM156AQ8NDB6 213 aa17.31■□□□□ 0.36
COMMD4-208ENST00000563220 NECAB3Q96P71 396 aaPredicted RBP17.31■□□□□ 0.36
COMMD4-208ENST00000563220 IER2Q9BTL4 223 aa17.31■□□□□ 0.36
COMMD4-208ENST00000563220 SRMSQ9H3Y6 488 aa17.31■□□□□ 0.36
COMMD4-208ENST00000563220 NMRK1Q9NWW6 199 aa17.31■□□□□ 0.36
COMMD4-208ENST00000563220 CPNE7Q9UBL6 633 aa17.31■□□□□ 0.36
COMMD4-208ENST00000563220 CD300AQ9UGN4 299 aa17.31■□□□□ 0.36
COMMD4-208ENST00000563220 PRORSD1PA6NEY8 169 aa17.31■□□□□ 0.36
COMMD4-208ENST00000563220 ANKDD1BA6NHY2 528 aa17.31■□□□□ 0.36
COMMD4-208ENST00000563220 ISM1B1AKI9 464 aa17.31■□□□□ 0.36
COMMD4-208ENST00000563220 OR1F1O43749 312 aa17.31■□□□□ 0.36
COMMD4-208ENST00000563220 MYO1DO94832 1006 aa17.31■□□□□ 0.36
COMMD4-208ENST00000563220 VIPP01282 170 aa17.31■□□□□ 0.36
COMMD4-208ENST00000563220 LMNAP02545 664 aaKnown RBP17.31■□□□□ 0.36
COMMD4-208ENST00000563220 IL6P05231 212 aa17.31■□□□□ 0.36
COMMD4-208ENST00000563220 ME2P23368 584 aa17.31■□□□□ 0.36
COMMD4-208ENST00000563220 SLC6A2P23975 617 aa17.31■□□□□ 0.36
COMMD4-208ENST00000563220 PTX3P26022 381 aaPredicted RBP17.31■□□□□ 0.36
COMMD4-208ENST00000563220 CYP4F2P78329 520 aa17.31■□□□□ 0.36
COMMD4-208ENST00000563220 ABATP80404 500 aa17.31■□□□□ 0.36
COMMD4-208ENST00000563220 MS4A2Q01362 244 aa17.31■□□□□ 0.36
COMMD4-208ENST00000563220 KIAA1614Q5VZ46 1190 aa17.31■□□□□ 0.36
COMMD4-208ENST00000563220 GALNT18Q6P9A2 607 aa17.31■□□□□ 0.36
COMMD4-208ENST00000563220 DLEU7Q6UYE1 221 aa17.31■□□□□ 0.36
COMMD4-208ENST00000563220 SYT12Q8IV01 421 aa17.31■□□□□ 0.36
COMMD4-208ENST00000563220 TRIM48Q8IWZ4 208 aa17.31■□□□□ 0.36
COMMD4-208ENST00000563220 SLC15A3Q8IY34 581 aa17.31■□□□□ 0.36
COMMD4-208ENST00000563220 FAM9CQ8IZT9 166 aa17.31■□□□□ 0.36
COMMD4-208ENST00000563220 WDR48Q8TAF3 677 aa17.31■□□□□ 0.36
COMMD4-208ENST00000563220 SLC37A2Q8TED4 501 aa17.31■□□□□ 0.36
COMMD4-208ENST00000563220 SLC13A3Q8WWT9 602 aa17.31■□□□□ 0.36
COMMD4-208ENST00000563220 PITHD1Q9GZP4 211 aaPredicted RBP17.31■□□□□ 0.36
COMMD4-208ENST00000563220 TWSG1Q9GZX9 223 aa17.31■□□□□ 0.36
COMMD4-208ENST00000563220 SIRT5Q9NXA8 310 aa17.31■□□□□ 0.36
COMMD4-208ENST00000563220 GMPR2Q9P2T1 348 aaKnown RBP17.31■□□□□ 0.36
COMMD4-208ENST00000563220 NKX1-2Q9UD57 310 aaPredicted RBP17.31■□□□□ 0.36
COMMD4-208ENST00000563220 KLHL20Q9Y2M5 609 aa17.31■□□□□ 0.36
COMMD4-208ENST00000563220 OR5K4A6NMS3 321 aa17.3■□□□□ 0.36
COMMD4-208ENST00000563220 TRIM38O00635 465 aa17.3■□□□□ 0.36
COMMD4-208ENST00000563220 MAP3K7O43318 606 aa17.3■□□□□ 0.36
COMMD4-208ENST00000563220 AKAP10O43572 662 aa17.3■□□□□ 0.36
COMMD4-208ENST00000563220 KLHL18O94889 574 aa17.3■□□□□ 0.36
COMMD4-208ENST00000563220 ANXA4P09525 319 aaPredicted RBP17.3■□□□□ 0.36
COMMD4-208ENST00000563220 NME1P15531 152 aaKnown RBP17.3■□□□□ 0.36
COMMD4-208ENST00000563220 TCN1P20061 433 aaPredicted RBP17.3■□□□□ 0.36
COMMD4-208ENST00000563220 TIA1P31483 386 aaKnown RBP eCLIP17.3■□□□□ 0.36
COMMD4-208ENST00000563220 PHEXP78562 749 aa17.3■□□□□ 0.36
COMMD4-208ENST00000563220 PLIN5Q00G26 463 aa17.3■□□□□ 0.36
COMMD4-208ENST00000563220 COMMD6Q7Z4G1 85 aa17.3■□□□□ 0.36
COMMD4-208ENST00000563220 METTL4Q8N3J2 472 aa17.3■□□□□ 0.36
COMMD4-208ENST00000563220 FAM46DQ8NEK8 389 aa17.3■□□□□ 0.36
COMMD4-208ENST00000563220 DNAJB14Q8TBM8 379 aa17.3■□□□□ 0.36
COMMD4-208ENST00000563220 ZFPM2Q8WW38 1151 aa17.3■□□□□ 0.36
COMMD4-208ENST00000563220 DNASE2BQ8WZ79 361 aa17.3■□□□□ 0.36
COMMD4-208ENST00000563220 TESCQ96BS2 214 aa17.3■□□□□ 0.36
COMMD4-208ENST00000563220 RSRC1Q96IZ7 334 aaKnown RBP17.3■□□□□ 0.36
COMMD4-208ENST00000563220 TRIM8Q9BZR9 551 aa17.3■□□□□ 0.36
COMMD4-208ENST00000563220 POT1Q9NUX5 634 aa17.3■□□□□ 0.36
COMMD4-208ENST00000563220 TMEM184CQ9NVA4 438 aa17.3■□□□□ 0.36
COMMD4-208ENST00000563220 CMTM6Q9NX76 183 aa17.3■□□□□ 0.36
COMMD4-208ENST00000563220 ABCD2Q9UBJ2 740 aa17.3■□□□□ 0.36
COMMD4-208ENST00000563220 ADGRE2Q9UHX3 823 aa17.3■□□□□ 0.36
COMMD4-208ENST00000563220 KIR2DS5A0A0G2JLQ3 304 aa17.29■□□□□ 0.36
COMMD4-208ENST00000563220 A0A0G2JNG1 304 aa17.29■□□□□ 0.36
COMMD4-208ENST00000563220 KIR2DS3K7RE56 304 aa17.29■□□□□ 0.36
COMMD4-208ENST00000563220 NME4O00746 187 aa17.29■□□□□ 0.36
COMMD4-208ENST00000563220 KRT36O76013 467 aa17.29■□□□□ 0.36
COMMD4-208ENST00000563220 GBAP04062 536 aa17.29■□□□□ 0.36
COMMD4-208ENST00000563220 HOXB3P14651 431 aaPredicted RBP17.29■□□□□ 0.36
COMMD4-208ENST00000563220 PCSK2P16519 638 aa17.29■□□□□ 0.36
COMMD4-208ENST00000563220 PRPS1L1P21108 318 aa17.29■□□□□ 0.36
COMMD4-208ENST00000563220 CLNS1AP54105 237 aaKnown RBP17.29■□□□□ 0.36
COMMD4-208ENST00000563220 CCNIQ14094 377 aa17.29■□□□□ 0.36
COMMD4-208ENST00000563220 KIR2DS5Q14953 304 aa17.29■□□□□ 0.36
COMMD4-208ENST00000563220 PLCL1Q15111 1095 aa17.29■□□□□ 0.36
COMMD4-208ENST00000563220 DEPDC1Q5TB30 811 aa17.29■□□□□ 0.36
COMMD4-208ENST00000563220 KIAA2013Q8IYS2 634 aa17.29■□□□□ 0.36
COMMD4-208ENST00000563220 FLVCR1-AS1Q8TAF5 88 aa17.29■□□□□ 0.36
COMMD4-208ENST00000563220 GTF2H4Q92759 462 aa17.29■□□□□ 0.36
COMMD4-208ENST00000563220 DPH7Q9BTV6 452 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms