RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 AKIRIN1Q9H9L7 192 aaPredicted RBP12.81□□□□□ -0.36
CDH1-204ENST00000562118 SENP1Q9P0U3 644 aa12.81□□□□□ -0.36
CDH1-204ENST00000562118 PCTPQ9UKL6 214 aa12.81□□□□□ -0.36
CDH1-204ENST00000562118 DYRK1BQ9Y463 629 aa12.81□□□□□ -0.36
CDH1-204ENST00000562118 LOC101059948A0A1B0GTJ6 334 aa12.8□□□□□ -0.36
CDH1-204ENST00000562118 A0A1B0GX78 115 aa12.8□□□□□ -0.36
CDH1-204ENST00000562118 SMIM23A6NLE4 172 aa12.8□□□□□ -0.36
CDH1-204ENST00000562118 MEN1O00255 615 aa12.8□□□□□ -0.36
CDH1-204ENST00000562118 TXNDC9O14530 226 aa12.8□□□□□ -0.36
CDH1-204ENST00000562118 DSCR3O14972 297 aa12.8□□□□□ -0.36
CDH1-204ENST00000562118 TYROBPO43914 113 aa12.8□□□□□ -0.36
CDH1-204ENST00000562118 DLX3O60479 287 aa12.8□□□□□ -0.36
CDH1-204ENST00000562118 SIX3O95343 332 aaPredicted RBP12.8□□□□□ -0.36
CDH1-204ENST00000562118 NTRK1P04629 796 aa12.8□□□□□ -0.36
CDH1-204ENST00000562118 RAB40ALP0C0E4 278 aa12.8□□□□□ -0.36
CDH1-204ENST00000562118 GFAPP14136 432 aa12.8□□□□□ -0.36
CDH1-204ENST00000562118 KRT15P19012 456 aa12.8□□□□□ -0.36
CDH1-204ENST00000562118 PIK3CGP48736 1102 aa12.8□□□□□ -0.36
CDH1-204ENST00000562118 VSX2P58304 361 aaPredicted RBP12.8□□□□□ -0.36
CDH1-204ENST00000562118 SNRPNP63162 240 aaKnown RBP12.8□□□□□ -0.36
CDH1-204ENST00000562118 IFFO1Q0D2I5 559 aa12.8□□□□□ -0.36
CDH1-204ENST00000562118 PWP1Q13610 501 aa12.8□□□□□ -0.36
CDH1-204ENST00000562118 FAM53BQ14153 422 aa12.8□□□□□ -0.36
CDH1-204ENST00000562118 ADPRMQ3LIE5 342 aa12.8□□□□□ -0.36
CDH1-204ENST00000562118 CCDC153Q494R4 210 aa12.8□□□□□ -0.36
CDH1-204ENST00000562118 FBXO48Q5FWF7 155 aa12.8□□□□□ -0.36
CDH1-204ENST00000562118 TMEM214Q6NUQ4 689 aaKnown RBP12.8□□□□□ -0.36
CDH1-204ENST00000562118 CROCCP2Q86T23 111 aa12.8□□□□□ -0.36
CDH1-204ENST00000562118 TMPRSS11BQ86T26 416 aa12.8□□□□□ -0.36
CDH1-204ENST00000562118 PLD3Q8IV08 490 aa12.8□□□□□ -0.36
CDH1-204ENST00000562118 LAS2Q8IYD9 372 aa12.8□□□□□ -0.36
CDH1-204ENST00000562118 CACNA2D3Q8IZS8 1091 aa12.8□□□□□ -0.36
CDH1-204ENST00000562118 AFAP1L2Q8N4X5 818 aa12.8□□□□□ -0.36
CDH1-204ENST00000562118 ZNF655Q8N720 491 aaPredicted RBP12.8□□□□□ -0.36
CDH1-204ENST00000562118 CSNK1A1LQ8N752 337 aa12.8□□□□□ -0.36
CDH1-204ENST00000562118 PTGR2Q8N8N7 351 aaPredicted RBP12.8□□□□□ -0.36
CDH1-204ENST00000562118 L3MBTL4Q8NA19 623 aa12.8□□□□□ -0.36
CDH1-204ENST00000562118 RDH11Q8TC12 318 aa12.8□□□□□ -0.36
CDH1-204ENST00000562118 EXT2Q93063 718 aa12.8□□□□□ -0.36
CDH1-204ENST00000562118 L3HYPDHQ96EM0 354 aa12.8□□□□□ -0.36
CDH1-204ENST00000562118 APOPT1Q96IL0 206 aa12.8□□□□□ -0.36
CDH1-204ENST00000562118 AIF1LQ9BQI0 150 aa12.8□□□□□ -0.36
CDH1-204ENST00000562118 EFCAB11Q9BUY7 163 aa12.8□□□□□ -0.36
CDH1-204ENST00000562118 SLC6A16Q9GZN6 736 aa12.8□□□□□ -0.36
CDH1-204ENST00000562118 SLC26A1Q9H2B4 701 aa12.8□□□□□ -0.36
CDH1-204ENST00000562118 RHBGQ9H310 441 aa12.8□□□□□ -0.36
CDH1-204ENST00000562118 ZBTB26Q9HCK0 441 aa12.8□□□□□ -0.36
CDH1-204ENST00000562118 SSU72Q9NP77 194 aaKnown RBP12.8□□□□□ -0.36
CDH1-204ENST00000562118 SLC22A11Q9NSA0 550 aa12.8□□□□□ -0.36
CDH1-204ENST00000562118 CUTCQ9NTM9 273 aa12.8□□□□□ -0.36
CDH1-204ENST00000562118 CPSF2Q9P2I0 782 aaKnown RBP12.8□□□□□ -0.36
CDH1-204ENST00000562118 OPTCQ9UBM4 332 aa12.8□□□□□ -0.36
CDH1-204ENST00000562118 ZFP69BQ9UJL9 534 aa12.8□□□□□ -0.36
CDH1-204ENST00000562118 RUVBL1Q9Y265 456 aaKnown RBP12.8□□□□□ -0.36
CDH1-204ENST00000562118 ACTL7BQ9Y614 415 aa12.8□□□□□ -0.36
CDH1-204ENST00000562118 BSNQ9UPA5 3926 aa12.8□□□□□ -0.36
CDH1-204ENST00000562118 IGLV3-12A0A075B6K2 115 aa12.79□□□□□ -0.36
CDH1-204ENST00000562118 FEZF1A0PJY2 475 aa12.79□□□□□ -0.36
CDH1-204ENST00000562118 HYKKA2RU49 373 aa12.79□□□□□ -0.36
CDH1-204ENST00000562118 LRRC14BA6NHZ5 514 aa12.79□□□□□ -0.36
CDH1-204ENST00000562118 RRP8O43159 456 aaKnown RBP12.79□□□□□ -0.36
CDH1-204ENST00000562118 SMIM24O75264 130 aa12.79□□□□□ -0.36
CDH1-204ENST00000562118 SMIM10L1P0DMW3 83 aa12.79□□□□□ -0.36
CDH1-204ENST00000562118 EPB42P16452 691 aa12.79□□□□□ -0.36
CDH1-204ENST00000562118 ATP5F1P24539 256 aaPredicted RBP12.79□□□□□ -0.36
CDH1-204ENST00000562118 CXCR2P25025 360 aa12.79□□□□□ -0.36
CDH1-204ENST00000562118 VARSP26640 1264 aaKnown RBP12.79□□□□□ -0.36
CDH1-204ENST00000562118 GRK3P35626 688 aa12.79□□□□□ -0.36
CDH1-204ENST00000562118 CCT5P48643 541 aa12.79□□□□□ -0.36
CDH1-204ENST00000562118 ATP1A2P50993 1020 aa12.79□□□□□ -0.36
CDH1-204ENST00000562118 PRKAA2P54646 552 aa12.79□□□□□ -0.36
CDH1-204ENST00000562118 HERVK_113P63132 956 aa12.79□□□□□ -0.36
CDH1-204ENST00000562118 DOC2AQ14183 400 aa12.79□□□□□ -0.36
CDH1-204ENST00000562118 HKDC1Q2TB90 917 aa12.79□□□□□ -0.36
CDH1-204ENST00000562118 FAM214AQ32MH5 1076 aa12.79□□□□□ -0.36
CDH1-204ENST00000562118 GGTA1PQ4G0N0 100 aa12.79□□□□□ -0.36
CDH1-204ENST00000562118 GRHL2Q6ISB3 625 aa12.79□□□□□ -0.36
CDH1-204ENST00000562118 LCN10Q6JVE6 187 aa12.79□□□□□ -0.36
CDH1-204ENST00000562118 MRPL14Q6P1L8 145 aaKnown RBP12.79□□□□□ -0.36
CDH1-204ENST00000562118 PRMT9Q6P2P2 845 aa12.79□□□□□ -0.36
CDH1-204ENST00000562118 C16orf46Q6P387 395 aa12.79□□□□□ -0.36
CDH1-204ENST00000562118 ZYG11AQ6WRX3 759 aa12.79□□□□□ -0.36
CDH1-204ENST00000562118 COX15Q7KZN9 410 aa12.79□□□□□ -0.36
CDH1-204ENST00000562118 GOLGA7Q7Z5G4 137 aa12.79□□□□□ -0.36
CDH1-204ENST00000562118 VN1R5Q7Z5H4 357 aa12.79□□□□□ -0.36
CDH1-204ENST00000562118 TTC29Q8NA56 475 aaPredicted RBP12.79□□□□□ -0.36
CDH1-204ENST00000562118 TTLQ8NG68 377 aa12.79□□□□□ -0.36
CDH1-204ENST00000562118 FKBP10Q96AY3 582 aa12.79□□□□□ -0.36
CDH1-204ENST00000562118 ALKBH8Q96BT7 664 aaKnown RBP12.79□□□□□ -0.36
CDH1-204ENST00000562118 SMIM10Q96HG1 83 aa12.79□□□□□ -0.36
CDH1-204ENST00000562118 SLC45A3Q96JT2 553 aa12.79□□□□□ -0.36
CDH1-204ENST00000562118 NTMT1Q9BV86 223 aa12.79□□□□□ -0.36
CDH1-204ENST00000562118 ERVK-6Q9BXR3 956 aa12.79□□□□□ -0.36
CDH1-204ENST00000562118 AICDAQ9GZX7 198 aa12.79□□□□□ -0.36
CDH1-204ENST00000562118 PADI1Q9ULC6 663 aa12.79□□□□□ -0.36
CDH1-204ENST00000562118 GRID1Q9ULK0 1009 aa12.79□□□□□ -0.36
CDH1-204ENST00000562118 ZNF490Q9ULM2 529 aaPredicted RBP12.79□□□□□ -0.36
CDH1-204ENST00000562118 PPT2Q9UMR5 302 aa12.79□□□□□ -0.36
CDH1-204ENST00000562118 PLLPQ9Y342 182 aa12.79□□□□□ -0.36
CDH1-204ENST00000562118 SLC22A7Q9Y694 548 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms