RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 C11orf57Q6ZUT1 292 aaPredicted RBP3.5□□□□□ -1.85
HERC1-215ENST00000561436 C16orf82Q7Z2V1 217 aa3.5□□□□□ -1.85
HERC1-215ENST00000561436 ITPRIPQ8IWB1 547 aa3.5□□□□□ -1.85
HERC1-215ENST00000561436 FAM114A1Q8IWE2 563 aa3.5□□□□□ -1.85
HERC1-215ENST00000561436 FBXO16Q8IX29 292 aaPredicted RBP3.5□□□□□ -1.85
HERC1-215ENST00000561436 CFAP206Q8IYR0 622 aa3.5□□□□□ -1.85
HERC1-215ENST00000561436 NAGSQ8N159 534 aa3.5□□□□□ -1.85
HERC1-215ENST00000561436 RYBPQ8N488 228 aaPredicted RBP3.5□□□□□ -1.85
HERC1-215ENST00000561436 MAB21L3Q8N8X9 362 aa3.5□□□□□ -1.85
HERC1-215ENST00000561436 ZNF441Q8N8Z8 693 aa3.5□□□□□ -1.85
HERC1-215ENST00000561436 LMO3Q8TAP4 145 aa3.5□□□□□ -1.85
HERC1-215ENST00000561436 ZFAND2BQ8WV99 257 aa3.5□□□□□ -1.85
HERC1-215ENST00000561436 SYN2Q92777 582 aaPredicted RBP3.5□□□□□ -1.85
HERC1-215ENST00000561436 FRAT1Q92837 279 aaPredicted RBP3.5□□□□□ -1.85
HERC1-215ENST00000561436 FER1L6-AS2Q96M78 137 aa3.5□□□□□ -1.85
HERC1-215ENST00000561436 ZNF558Q96NG5 402 aa3.5□□□□□ -1.85
HERC1-215ENST00000561436 NECTIN4Q96NY8 510 aa3.5□□□□□ -1.85
HERC1-215ENST00000561436 CTAGE1Q96RT6 745 aa3.5□□□□□ -1.85
HERC1-215ENST00000561436 OLFM1Q99784 485 aa3.5□□□□□ -1.85
HERC1-215ENST00000561436 BTBD10Q9BSF8 475 aa3.5□□□□□ -1.85
HERC1-215ENST00000561436 ABHD6Q9BV23 337 aa3.5□□□□□ -1.85
HERC1-215ENST00000561436 C1QTNF4Q9BXJ3 329 aa3.5□□□□□ -1.85
HERC1-215ENST00000561436 FTHL17Q9BXU8 183 aa3.5□□□□□ -1.85
HERC1-215ENST00000561436 KRTAP2-2Q9BYT5 123 aa3.5□□□□□ -1.85
HERC1-215ENST00000561436 EVA1AQ9H8M9 152 aa3.5□□□□□ -1.85
HERC1-215ENST00000561436 UPF2Q9HAU5 1272 aaKnown RBP3.5□□□□□ -1.85
HERC1-215ENST00000561436 GRPEL1Q9HAV7 217 aa3.5□□□□□ -1.85
HERC1-215ENST00000561436 TCF7L2Q9NQB0 619 aa3.5□□□□□ -1.85
HERC1-215ENST00000561436 KLHL1Q9NR64 748 aa3.5□□□□□ -1.85
HERC1-215ENST00000561436 ECHDC1Q9NTX5 307 aa3.5□□□□□ -1.85
HERC1-215ENST00000561436 SLC38A7Q9NVC3 462 aa3.5□□□□□ -1.85
HERC1-215ENST00000561436 RHCGQ9UBD6 479 aa3.5□□□□□ -1.85
HERC1-215ENST00000561436 DDX19BQ9UMR2 479 aa3.5□□□□□ -1.85
HERC1-215ENST00000561436 PADI2Q9Y2J8 665 aa3.5□□□□□ -1.85
HERC1-215ENST00000561436 MRPL11Q9Y3B7 192 aaKnown RBP3.5□□□□□ -1.85
HERC1-215ENST00000561436 DLG5Q8TDM6 1919 aa3.5□□□□□ -1.85
HERC1-215ENST00000561436 BAHCC1Q9P281 2608 aa3.5□□□□□ -1.85
HERC1-215ENST00000561436 DDX60LQ5H9U9 1706 aaKnown RBP3.5□□□□□ -1.85
HERC1-215ENST00000561436 SPTBN5Q9NRC6 3674 aaKnown RBP3.49□□□□□ -1.85
HERC1-215ENST00000561436 ABCB11O95342 1321 aa3.49□□□□□ -1.85
HERC1-215ENST00000561436 TTC41PQ6P2S7 1318 aa3.49□□□□□ -1.85
HERC1-215ENST00000561436 NRCAMQ92823 1304 aa3.49□□□□□ -1.85
HERC1-215ENST00000561436 A0A1W2PRB8 838 aa3.49□□□□□ -1.85
HERC1-215ENST00000561436 IFITM10A6NMD0 228 aa3.49□□□□□ -1.85
HERC1-215ENST00000561436 CCDC188H7C350 402 aa3.49□□□□□ -1.85
HERC1-215ENST00000561436 GPAA1O43292 621 aa3.49□□□□□ -1.85
HERC1-215ENST00000561436 CAVIN2O95810 425 aa3.49□□□□□ -1.85
HERC1-215ENST00000561436 PENKP01210 267 aaPredicted RBP3.49□□□□□ -1.85
HERC1-215ENST00000561436 SNRNP70P08621 437 aaKnown RBP3.49□□□□□ -1.85
HERC1-215ENST00000561436 STAG3L1P0CL83 205 aa3.49□□□□□ -1.85
HERC1-215ENST00000561436 HSPD1P10809 573 aaKnown RBP3.49□□□□□ -1.85
HERC1-215ENST00000561436 HLA-DOBP13765 273 aa3.49□□□□□ -1.85
HERC1-215ENST00000561436 IFNAR1P17181 557 aa3.49□□□□□ -1.85
HERC1-215ENST00000561436 DGKAP23743 735 aa3.49□□□□□ -1.85
HERC1-215ENST00000561436 PSMA3P25788 255 aa3.49□□□□□ -1.85
HERC1-215ENST00000561436 NPY4RP50391 375 aa3.49□□□□□ -1.85
HERC1-215ENST00000561436 BMXP51813 675 aa3.49□□□□□ -1.85
HERC1-215ENST00000561436 LIMK1P53667 647 aa3.49□□□□□ -1.85
HERC1-215ENST00000561436 TPD52P55327 224 aaPredicted RBP3.49□□□□□ -1.85
HERC1-215ENST00000561436 RPS6P62753 249 aaKnown RBP3.49□□□□□ -1.85
HERC1-215ENST00000561436 DEFB103AP81534 67 aa3.49□□□□□ -1.85
HERC1-215ENST00000561436 PPARDQ03181 441 aa3.49□□□□□ -1.85
HERC1-215ENST00000561436 ARHGAP1Q07960 439 aa3.49□□□□□ -1.85
HERC1-215ENST00000561436 ACSM1Q08AH1 577 aa3.49□□□□□ -1.85
HERC1-215ENST00000561436 SCARB2Q14108 478 aa3.49□□□□□ -1.85
HERC1-215ENST00000561436 ACCSLQ4AC99 568 aa3.49□□□□□ -1.85
HERC1-215ENST00000561436 MDH1BQ5I0G3 518 aa3.49□□□□□ -1.85
HERC1-215ENST00000561436 PRR27Q6MZM9 219 aa3.49□□□□□ -1.85
HERC1-215ENST00000561436 C11orf63Q6NUN7 778 aa3.49□□□□□ -1.85
HERC1-215ENST00000561436 MFSD12Q6NUT3 480 aa3.49□□□□□ -1.85
HERC1-215ENST00000561436 C11orf88Q6PI97 169 aa3.49□□□□□ -1.85
HERC1-215ENST00000561436 SPSB3Q6PJ21 355 aa3.49□□□□□ -1.85
HERC1-215ENST00000561436 MOXD1Q6UVY6 613 aa3.49□□□□□ -1.85
HERC1-215ENST00000561436 LINGO4Q6UY18 593 aa3.49□□□□□ -1.85
HERC1-215ENST00000561436 RAD9BQ6WBX8 426 aa3.49□□□□□ -1.85
HERC1-215ENST00000561436 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.49□□□□□ -1.85
HERC1-215ENST00000561436 FAM47EQ6ZV65 393 aa3.49□□□□□ -1.85
HERC1-215ENST00000561436 SATL1Q86VE3 508 aa3.49□□□□□ -1.85
HERC1-215ENST00000561436 ZNF595Q8IYB9 648 aa3.49□□□□□ -1.85
HERC1-215ENST00000561436 POC1AQ8NBT0 407 aa3.49□□□□□ -1.85
HERC1-215ENST00000561436 PRSS33Q8NF86 280 aa3.49□□□□□ -1.85
HERC1-215ENST00000561436 DBF4BQ8NFT6 615 aa3.49□□□□□ -1.85
HERC1-215ENST00000561436 DMBX1Q8NFW5 382 aa3.49□□□□□ -1.85
HERC1-215ENST00000561436 SUSD6Q92537 303 aa3.49□□□□□ -1.85
HERC1-215ENST00000561436 SPSB1Q96BD6 273 aa3.49□□□□□ -1.85
HERC1-215ENST00000561436 ZNF689Q96CS4 500 aaPredicted RBP3.49□□□□□ -1.85
HERC1-215ENST00000561436 LINC00615Q96LM1 132 aaPredicted RBP3.49□□□□□ -1.85
HERC1-215ENST00000561436 SGK494Q96LW2 274 aa3.49□□□□□ -1.85
HERC1-215ENST00000561436 ZNF583Q96ND8 569 aa3.49□□□□□ -1.85
HERC1-215ENST00000561436 MGME1Q9BQP7 344 aa3.49□□□□□ -1.85
HERC1-215ENST00000561436 FSD1Q9BTV5 496 aa3.49□□□□□ -1.85
HERC1-215ENST00000561436 LRRCC1Q9C099 1032 aa3.49□□□□□ -1.85
HERC1-215ENST00000561436 MIS12Q9H081 205 aa3.49□□□□□ -1.85
HERC1-215ENST00000561436 CSTL1Q9H114 145 aa3.49□□□□□ -1.85
HERC1-215ENST00000561436 NAPBQ9H115 298 aa3.49□□□□□ -1.85
HERC1-215ENST00000561436 BOLA2Q9H3K6 86 aa3.49□□□□□ -1.85
HERC1-215ENST00000561436 RNF41Q9H4P4 317 aaPredicted RBP3.49□□□□□ -1.85
HERC1-215ENST00000561436 RETREG1Q9H6L5 497 aa3.49□□□□□ -1.85
HERC1-215ENST00000561436 DDX31Q9H8H2 851 aaKnown RBP3.49□□□□□ -1.85
HERC1-215ENST00000561436 APOBEC3GQ9HC16 384 aaKnown RBP3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms