RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 B3GNT3Q9Y2A9 372 aa16.33■□□□□ 0.2
CDC42BPB-208ENST00000561271 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.33■□□□□ 0.2
CDC42BPB-208ENST00000561271 FAM95CA0A1B0GW59 222 aa16.32■□□□□ 0.2
CDC42BPB-208ENST00000561271 NPEPPSL1A6NEC2 478 aa16.32■□□□□ 0.2
CDC42BPB-208ENST00000561271 PIAS1O75925 651 aa16.32■□□□□ 0.2
CDC42BPB-208ENST00000561271 GUCA1CO95843 209 aa16.32■□□□□ 0.2
CDC42BPB-208ENST00000561271 HPP00738 406 aa16.32■□□□□ 0.2
CDC42BPB-208ENST00000561271 COX6A1P12074 109 aa16.32■□□□□ 0.2
CDC42BPB-208ENST00000561271 IL1RNP18510 177 aa16.32■□□□□ 0.2
CDC42BPB-208ENST00000561271 CCND1P24385 295 aa16.32■□□□□ 0.2
CDC42BPB-208ENST00000561271 HRH2P25021 359 aa16.32■□□□□ 0.2
CDC42BPB-208ENST00000561271 EFNA3P52797 238 aa16.32■□□□□ 0.2
CDC42BPB-208ENST00000561271 EMP2P54851 167 aa16.32■□□□□ 0.2
CDC42BPB-208ENST00000561271 MEF2AQ02078 507 aaPredicted RBP16.32■□□□□ 0.2
CDC42BPB-208ENST00000561271 NDUFA9Q16795 377 aa16.32■□□□□ 0.2
CDC42BPB-208ENST00000561271 CAPN13Q6MZZ7 669 aaPredicted RBP16.32■□□□□ 0.2
CDC42BPB-208ENST00000561271 SBSNQ6UWP8 590 aa16.32■□□□□ 0.2
CDC42BPB-208ENST00000561271 TMEM207Q6UWW9 146 aa16.32■□□□□ 0.2
CDC42BPB-208ENST00000561271 STRA8Q7Z7C7 330 aa16.32■□□□□ 0.2
CDC42BPB-208ENST00000561271 ZC3HC1Q86WB0 502 aaKnown RBP16.32■□□□□ 0.2
CDC42BPB-208ENST00000561271 IQCKQ8N0W5 287 aa16.32■□□□□ 0.2
CDC42BPB-208ENST00000561271 SHISA5Q8N114 240 aa16.32■□□□□ 0.2
CDC42BPB-208ENST00000561271 ZADH2Q8N4Q0 377 aa16.32■□□□□ 0.2
CDC42BPB-208ENST00000561271 TM9SF4Q92544 642 aa16.32■□□□□ 0.2
CDC42BPB-208ENST00000561271 THOC3Q96J01 351 aaKnown RBP16.32■□□□□ 0.2
CDC42BPB-208ENST00000561271 VPS50Q96JG6 964 aa16.32■□□□□ 0.2
CDC42BPB-208ENST00000561271 LHPPQ9H008 270 aa16.32■□□□□ 0.2
CDC42BPB-208ENST00000561271 MKKSQ9NPJ1 570 aaPredicted RBP16.32■□□□□ 0.2
CDC42BPB-208ENST00000561271 POLEQ07864 2286 aa16.31■□□□□ 0.2
CDC42BPB-208ENST00000561271 RAD51CO43502 376 aa16.31■□□□□ 0.2
CDC42BPB-208ENST00000561271 AVPR1BP47901 424 aa16.31■□□□□ 0.2
CDC42BPB-208ENST00000561271 AP1S2P56377 157 aa16.31■□□□□ 0.2
CDC42BPB-208ENST00000561271 FAM53BQ14153 422 aa16.31■□□□□ 0.2
CDC42BPB-208ENST00000561271 AGAP7PQ5VUJ5 663 aa16.31■□□□□ 0.2
CDC42BPB-208ENST00000561271 ATG9BQ674R7 924 aa16.31■□□□□ 0.2
CDC42BPB-208ENST00000561271 ASPGQ86U10 573 aa16.31■□□□□ 0.2
CDC42BPB-208ENST00000561271 CUZD1Q86UP6 607 aa16.31■□□□□ 0.2
CDC42BPB-208ENST00000561271 FAM26EQ8N5C1 309 aa16.31■□□□□ 0.2
CDC42BPB-208ENST00000561271 FBXL8Q96CD0 374 aa16.31■□□□□ 0.2
CDC42BPB-208ENST00000561271 C19orf60Q96EN9 201 aa16.31■□□□□ 0.2
CDC42BPB-208ENST00000561271 AGAP4Q96P64 663 aa16.31■□□□□ 0.2
CDC42BPB-208ENST00000561271 OR4K3Q96R72 315 aa16.31■□□□□ 0.2
CDC42BPB-208ENST00000561271 WDR77Q9BQA1 342 aaPredicted RBP16.31■□□□□ 0.2
CDC42BPB-208ENST00000561271 SMYD2Q9NRG4 433 aa16.31■□□□□ 0.2
CDC42BPB-208ENST00000561271 MOCS1Q9NZB8 636 aa16.31■□□□□ 0.2
CDC42BPB-208ENST00000561271 HCN3Q9P1Z3 774 aa16.31■□□□□ 0.2
CDC42BPB-208ENST00000561271 KCNE1BA0A087WTH5 132 aa16.3■□□□□ 0.2
CDC42BPB-208ENST00000561271 NSG1A0A0A6YYJ2 146 aa16.3■□□□□ 0.2
CDC42BPB-208ENST00000561271 CYSRT1A8MQ03 144 aa16.3■□□□□ 0.2
CDC42BPB-208ENST00000561271 CDC7O00311 574 aa16.3■□□□□ 0.2
CDC42BPB-208ENST00000561271 LCMT2O60294 686 aaKnown RBP16.3■□□□□ 0.2
CDC42BPB-208ENST00000561271 JRKO75564 520 aa16.3■□□□□ 0.2
CDC42BPB-208ENST00000561271 HEXBP07686 556 aa16.3■□□□□ 0.2
CDC42BPB-208ENST00000561271 ENO2P09104 434 aaPredicted RBP16.3■□□□□ 0.2
CDC42BPB-208ENST00000561271 NPPBP16860 134 aa16.3■□□□□ 0.2
CDC42BPB-208ENST00000561271 TAS2R39P59534 338 aa16.3■□□□□ 0.2
CDC42BPB-208ENST00000561271 MRPL49Q13405 166 aaKnown RBP16.3■□□□□ 0.2
CDC42BPB-208ENST00000561271 PPP1R3AQ16821 1122 aa16.3■□□□□ 0.2
CDC42BPB-208ENST00000561271 DUPD1Q68J44 220 aa16.3■□□□□ 0.2
CDC42BPB-208ENST00000561271 TMEM214Q6NUQ4 689 aaKnown RBP16.3■□□□□ 0.2
CDC42BPB-208ENST00000561271 Q6ZS92 163 aa16.3■□□□□ 0.2
CDC42BPB-208ENST00000561271 SLC26A11Q86WA9 606 aa16.3■□□□□ 0.2
CDC42BPB-208ENST00000561271 KCT2Q8NC54 265 aa16.3■□□□□ 0.2
CDC42BPB-208ENST00000561271 BBOF1Q8ND07 529 aa16.3■□□□□ 0.2
CDC42BPB-208ENST00000561271 SPATA4Q8NEY3 305 aa16.3■□□□□ 0.2
CDC42BPB-208ENST00000561271 OR56A3Q8NH54 315 aa16.3■□□□□ 0.2
CDC42BPB-208ENST00000561271 VPS39Q96JC1 886 aa16.3■□□□□ 0.2
CDC42BPB-208ENST00000561271 HAUS8Q9BT25 410 aa16.3■□□□□ 0.2
CDC42BPB-208ENST00000561271 TRIM54Q9BYV2 358 aa16.3■□□□□ 0.2
CDC42BPB-208ENST00000561271 TGIF2Q9GZN2 237 aa16.3■□□□□ 0.2
CDC42BPB-208ENST00000561271 SAYSD1Q9NPB0 183 aa16.3■□□□□ 0.2
CDC42BPB-208ENST00000561271 ASF1BQ9NVP2 202 aa16.3■□□□□ 0.2
CDC42BPB-208ENST00000561271 FAM187AA6NFU0 413 aa16.29■□□□□ 0.2
CDC42BPB-208ENST00000561271 TCP11X1B4DZS4 312 aa16.29■□□□□ 0.2
CDC42BPB-208ENST00000561271 SGK494L7N484 410 aa16.29■□□□□ 0.2
CDC42BPB-208ENST00000561271 NDC80O14777 642 aa16.29■□□□□ 0.2
CDC42BPB-208ENST00000561271 RDH16O75452 317 aa16.29■□□□□ 0.2
CDC42BPB-208ENST00000561271 NSA2O95478 260 aaKnown RBP16.29■□□□□ 0.2
CDC42BPB-208ENST00000561271 CELA2AP08217 269 aa16.29■□□□□ 0.2
CDC42BPB-208ENST00000561271 CXCR2P25025 360 aa16.29■□□□□ 0.2
CDC42BPB-208ENST00000561271 SSTR1P30872 391 aa16.29■□□□□ 0.2
CDC42BPB-208ENST00000561271 GRK3P35626 688 aa16.29■□□□□ 0.2
CDC42BPB-208ENST00000561271 CCR8P51685 355 aa16.29■□□□□ 0.2
CDC42BPB-208ENST00000561271 CALCOCO2Q13137 446 aa16.29■□□□□ 0.2
CDC42BPB-208ENST00000561271 MFSD4BQ5TF39 518 aa16.29■□□□□ 0.2
CDC42BPB-208ENST00000561271 LINC00696Q6ZRV3 163 aa16.29■□□□□ 0.2
CDC42BPB-208ENST00000561271 CEP97Q8IW35 865 aa16.29■□□□□ 0.2
CDC42BPB-208ENST00000561271 CISD2Q8N5K1 135 aaKnown RBP16.29■□□□□ 0.2
CDC42BPB-208ENST00000561271 AMER2Q8N7J2 671 aa16.29■□□□□ 0.2
CDC42BPB-208ENST00000561271 MFSD9Q8NBP5 474 aa16.29■□□□□ 0.2
CDC42BPB-208ENST00000561271 CAMKVQ8NCB2 501 aa16.29■□□□□ 0.2
CDC42BPB-208ENST00000561271 PPP4R1Q8TF05 950 aa16.29■□□□□ 0.2
CDC42BPB-208ENST00000561271 SNRNP40Q96DI7 357 aaKnown RBP16.29■□□□□ 0.2
CDC42BPB-208ENST00000561271 TM4SF19Q96DZ7 209 aa16.29■□□□□ 0.2
CDC42BPB-208ENST00000561271 THAP11Q96EK4 314 aa16.29■□□□□ 0.2
CDC42BPB-208ENST00000561271 CNDP1Q96KN2 507 aa16.29■□□□□ 0.2
CDC42BPB-208ENST00000561271 TSNARE1Q96NA8 513 aa16.29■□□□□ 0.2
CDC42BPB-208ENST00000561271 ERP44Q9BS26 406 aa16.29■□□□□ 0.2
CDC42BPB-208ENST00000561271 SLC29A3Q9BZD2 475 aa16.29■□□□□ 0.2
CDC42BPB-208ENST00000561271 SPNS1Q9H2V7 528 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms