RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 SLC22A4Q9H015 551 aa15.96■□□□□ 0.14
TPM1-228ENST00000560975 CFAP20Q9Y6A4 193 aaKnown RBP15.96■□□□□ 0.14
TPM1-228ENST00000560975 DNMT3AQ9Y6K1 912 aaPredicted RBP15.96■□□□□ 0.14
TPM1-228ENST00000560975 DOCK4Q8N1I0 1966 aa15.96■□□□□ 0.14
TPM1-228ENST00000560975 F8W810 466 aa15.95■□□□□ 0.14
TPM1-228ENST00000560975 PLK4O00444 970 aa15.95■□□□□ 0.14
TPM1-228ENST00000560975 SCAMP3O14828 347 aaKnown RBP15.95■□□□□ 0.14
TPM1-228ENST00000560975 CKMT1AP12532 417 aa15.95■□□□□ 0.14
TPM1-228ENST00000560975 HOXB9P17482 250 aaPredicted RBP15.95■□□□□ 0.14
TPM1-228ENST00000560975 UQCRC1P31930 480 aa15.95■□□□□ 0.14
TPM1-228ENST00000560975 SCN1BQ07699 218 aa15.95■□□□□ 0.14
TPM1-228ENST00000560975 FCHO2Q0JRZ9 810 aa15.95■□□□□ 0.14
TPM1-228ENST00000560975 PCBP1Q15365 356 aaKnown RBP eCLIP15.95■□□□□ 0.144e-6■□□□□ 10.4
TPM1-228ENST00000560975 GLCCI1Q86VQ1 547 aa15.95■□□□□ 0.14
TPM1-228ENST00000560975 IQCF2Q8IXL9 164 aa15.95■□□□□ 0.14
TPM1-228ENST00000560975 CACTIN-AS1Q8N1I8 211 aa15.95■□□□□ 0.14
TPM1-228ENST00000560975 SLC39A13Q96H72 371 aa15.95■□□□□ 0.14
TPM1-228ENST00000560975 DHRS9Q9BPW9 319 aa15.95■□□□□ 0.14
TPM1-228ENST00000560975 UCK2Q9BZX2 261 aa15.95■□□□□ 0.14
TPM1-228ENST00000560975 CIPCQ9C0C6 399 aa15.95■□□□□ 0.14
TPM1-228ENST00000560975 SRRQ9GZT4 340 aa15.95■□□□□ 0.14
TPM1-228ENST00000560975 ASAH2Q9NR71 780 aa15.95■□□□□ 0.14
TPM1-228ENST00000560975 RIMKLBQ9ULI2 386 aa15.95■□□□□ 0.14
TPM1-228ENST00000560975 VPS9D1Q9Y2B5 631 aa15.95■□□□□ 0.14
TPM1-228ENST00000560975 POLR2AP24928 1970 aaKnown RBP15.95■□□□□ 0.14
TPM1-228ENST00000560975 A0A075B6Q4 140 aa15.95■□□□□ 0.14
TPM1-228ENST00000560975 SMIM30A4D0T7 59 aa15.95■□□□□ 0.14
TPM1-228ENST00000560975 B4DXG7 233 aa15.95■□□□□ 0.14
TPM1-228ENST00000560975 TNFRSF10BO14763 440 aa15.95■□□□□ 0.14
TPM1-228ENST00000560975 OPN1SWP03999 348 aa15.95■□□□□ 0.14
TPM1-228ENST00000560975 UBL4AP11441 157 aa15.95■□□□□ 0.14
TPM1-228ENST00000560975 RPS5P46782 204 aaKnown RBP15.95■□□□□ 0.14
TPM1-228ENST00000560975 CASP9P55211 416 aa15.95■□□□□ 0.14
TPM1-228ENST00000560975 FAPQ12884 760 aa15.95■□□□□ 0.14
TPM1-228ENST00000560975 BTBD16Q32M84 506 aa15.95■□□□□ 0.14
TPM1-228ENST00000560975 TTLL9Q3SXZ7 439 aa15.95■□□□□ 0.14
TPM1-228ENST00000560975 TIMM50Q3ZCQ8 353 aa15.95■□□□□ 0.14
TPM1-228ENST00000560975 LRRC66Q68CR7 880 aa15.95■□□□□ 0.14
TPM1-228ENST00000560975 PTRHD1Q6GMV3 140 aaKnown RBP15.95■□□□□ 0.14
TPM1-228ENST00000560975 DPY19L3Q6ZPD9 716 aa15.95■□□□□ 0.14
TPM1-228ENST00000560975 ZNF367Q7RTV3 350 aa15.95■□□□□ 0.14
TPM1-228ENST00000560975 TRIM46Q7Z4K8 759 aa15.95■□□□□ 0.14
TPM1-228ENST00000560975 SERPINA11Q86U17 422 aa15.95■□□□□ 0.14
TPM1-228ENST00000560975 OR10G2Q8NGC3 310 aa15.95■□□□□ 0.14
TPM1-228ENST00000560975 SELENOMQ8WWX9 145 aa15.95■□□□□ 0.14
TPM1-228ENST00000560975 FATE1Q969F0 183 aa15.95■□□□□ 0.14
TPM1-228ENST00000560975 APOLD1Q96LR9 279 aa15.95■□□□□ 0.14
TPM1-228ENST00000560975 ABI2Q9NYB9 513 aaPredicted RBP15.95■□□□□ 0.14
TPM1-228ENST00000560975 DHRS7Q9Y394 339 aa15.95■□□□□ 0.14
TPM1-228ENST00000560975 ARL5CA6NH57 179 aa15.94■□□□□ 0.14
TPM1-228ENST00000560975 NT5C1B-RDH14C9J2C7 533 aa15.94■□□□□ 0.14
TPM1-228ENST00000560975 WWP2O00308 870 aa15.94■□□□□ 0.14
TPM1-228ENST00000560975 ARHGEF9O43307 516 aa15.94■□□□□ 0.14
TPM1-228ENST00000560975 CYP27C1Q4G0S4 372 aa15.94■□□□□ 0.14
TPM1-228ENST00000560975 CLECL1Q8IZS7 167 aa15.94■□□□□ 0.14
TPM1-228ENST00000560975 ANKK1Q8NFD2 765 aa15.94■□□□□ 0.14
TPM1-228ENST00000560975 LKAAEAR1Q8TD35 194 aa15.94■□□□□ 0.14
TPM1-228ENST00000560975 OMA1Q96E52 524 aa15.94■□□□□ 0.14
TPM1-228ENST00000560975 CRELD1Q96HD1 420 aa15.94■□□□□ 0.14
TPM1-228ENST00000560975 C7orf34Q96L11 122 aa15.94■□□□□ 0.14
TPM1-228ENST00000560975 FRMD6Q96NE9 622 aa15.94■□□□□ 0.14
TPM1-228ENST00000560975 GON7Q9BXV9 100 aa15.94■□□□□ 0.14
TPM1-228ENST00000560975 CD244Q9BZW8 370 aa15.94■□□□□ 0.14
TPM1-228ENST00000560975 PIM2Q9P1W9 311 aa15.94■□□□□ 0.14
TPM1-228ENST00000560975 UBA2Q9UBT2 640 aaPredicted RBP15.94■□□□□ 0.14
TPM1-228ENST00000560975 PCDHGB3Q9Y5G1 929 aa15.94■□□□□ 0.14
TPM1-228ENST00000560975 EPN2O95208 641 aa15.94■□□□□ 0.14
TPM1-228ENST00000560975 SDC1P18827 310 aa15.94■□□□□ 0.14
TPM1-228ENST00000560975 OR1E2P47887 323 aa15.94■□□□□ 0.14
TPM1-228ENST00000560975 PPIGQ13427 754 aaKnown RBP eCLIP15.94■□□□□ 0.141e-7■■□□□ 14.5
TPM1-228ENST00000560975 ARHGEF7Q14155 803 aa15.94■□□□□ 0.14
TPM1-228ENST00000560975 IQCCQ4KMZ1 466 aa15.94■□□□□ 0.14
TPM1-228ENST00000560975 RNF130Q86XS8 419 aa15.94■□□□□ 0.14
TPM1-228ENST00000560975 RNF175Q8N4F7 328 aa15.94■□□□□ 0.14
TPM1-228ENST00000560975 CLDN19Q8N6F1 224 aa15.94■□□□□ 0.14
TPM1-228ENST00000560975 OR9Q2Q8NGE9 314 aa15.94■□□□□ 0.14
TPM1-228ENST00000560975 NELL1Q92832 810 aa15.94■□□□□ 0.14
TPM1-228ENST00000560975 VPS35Q96QK1 796 aa15.94■□□□□ 0.14
TPM1-228ENST00000560975 C3orf14Q9HBI5 128 aa15.94■□□□□ 0.14
TPM1-228ENST00000560975 PCDHGA2Q9Y5H1 932 aa15.94■□□□□ 0.14
TPM1-228ENST00000560975 PLXNB2O15031 1838 aa15.93■□□□□ 0.14
TPM1-228ENST00000560975 TEX28O15482 410 aa15.93■□□□□ 0.14
TPM1-228ENST00000560975 PRLP01236 227 aa15.93■□□□□ 0.14
TPM1-228ENST00000560975 CHRM5P08912 532 aaPredicted RBP15.93■□□□□ 0.14
TPM1-228ENST00000560975 TRAPPC2P0DI81 140 aa15.93■□□□□ 0.14
TPM1-228ENST00000560975 TRAPPC2BP0DI82 140 aa15.93■□□□□ 0.14
TPM1-228ENST00000560975 KIR3DL1P43629 444 aa15.93■□□□□ 0.14
TPM1-228ENST00000560975 CDH12P55289 794 aa15.93■□□□□ 0.14
TPM1-228ENST00000560975 UPP1Q16831 310 aa15.93■□□□□ 0.14
TPM1-228ENST00000560975 ZNF792Q3KQV3 632 aa15.93■□□□□ 0.14
TPM1-228ENST00000560975 ZNF557Q8N988 423 aaPredicted RBP15.93■□□□□ 0.14
TPM1-228ENST00000560975 KLHDC9Q8NEP7 349 aa15.93■□□□□ 0.14
TPM1-228ENST00000560975 DNAJB8Q8NHS0 232 aa15.93■□□□□ 0.14
TPM1-228ENST00000560975 ZFAND1Q8TCF1 268 aa15.93■□□□□ 0.14
TPM1-228ENST00000560975 POP5Q969H6 163 aaKnown RBP15.93■□□□□ 0.14
TPM1-228ENST00000560975 GTPBP3Q969Y2 492 aaKnown RBP15.93■□□□□ 0.14
TPM1-228ENST00000560975 TRMT61AQ96FX7 289 aaKnown RBP15.93■□□□□ 0.14
TPM1-228ENST00000560975 EPYCQ99645 322 aa15.93■□□□□ 0.14
TPM1-228ENST00000560975 BOCQ9BWV1 1114 aa15.93■□□□□ 0.14
TPM1-228ENST00000560975 FAM126AQ9BYI3 521 aaPredicted RBP15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms