RNA–Protein interactions for RNA: ENST00000560871.5

RABGGTA-219, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 886 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-219ENST00000560871 THAP11Q96EK4 314 aa14.78□□□□□ -0.04
RABGGTA-219ENST00000560871 CCDC77Q9BR77 488 aa14.78□□□□□ -0.04
RABGGTA-219ENST00000560871 CD244Q9BZW8 370 aa14.78□□□□□ -0.04
RABGGTA-219ENST00000560871 FAM117AQ9C073 453 aa14.78□□□□□ -0.04
RABGGTA-219ENST00000560871 CNOT10Q9H9A5 744 aaKnown RBP14.78□□□□□ -0.04
RABGGTA-219ENST00000560871 SLC22A11Q9NSA0 550 aa14.78□□□□□ -0.04
RABGGTA-219ENST00000560871 DNAJC11Q9NVH1 559 aa14.78□□□□□ -0.04
RABGGTA-219ENST00000560871 GPRC5BQ9NZH0 403 aa14.78□□□□□ -0.04
RABGGTA-219ENST00000560871 RUVBL1Q9Y265 456 aaKnown RBP14.78□□□□□ -0.04
RABGGTA-219ENST00000560871 FER1L5A0AVI2 2057 aa14.77□□□□□ -0.04
RABGGTA-219ENST00000560871 BAHCC1Q9P281 2608 aa14.77□□□□□ -0.04
RABGGTA-219ENST00000560871 TRBC2A0A5B9 178 aa14.77□□□□□ -0.05
RABGGTA-219ENST00000560871 HYKKA2RU49 373 aa14.77□□□□□ -0.05
RABGGTA-219ENST00000560871 MAP2K7O14733 419 aa14.77□□□□□ -0.05
RABGGTA-219ENST00000560871 NKX2-8O15522 239 aa14.77□□□□□ -0.05
RABGGTA-219ENST00000560871 PRAMEF4O60810 478 aa14.77□□□□□ -0.05
RABGGTA-219ENST00000560871 STK16O75716 305 aa14.77□□□□□ -0.05
RABGGTA-219ENST00000560871 ONECUT2O95948 504 aa14.77□□□□□ -0.05
RABGGTA-219ENST00000560871 S100BP04271 92 aaPredicted RBP14.77□□□□□ -0.05
RABGGTA-219ENST00000560871 RAB40ALP0C0E4 278 aa14.77□□□□□ -0.05
RABGGTA-219ENST00000560871 PLA2G2AP14555 144 aa14.77□□□□□ -0.05
RABGGTA-219ENST00000560871 SCTRP47872 440 aa14.77□□□□□ -0.05
RABGGTA-219ENST00000560871 AGTR2P50052 363 aa14.77□□□□□ -0.05
RABGGTA-219ENST00000560871 SNRPNP63162 240 aaKnown RBP14.77□□□□□ -0.05
RABGGTA-219ENST00000560871 SETDB1Q15047 1291 aa14.77□□□□□ -0.05
RABGGTA-219ENST00000560871 NCF4Q15080 339 aa14.77□□□□□ -0.05
RABGGTA-219ENST00000560871 CRTC2Q53ET0 693 aaPredicted RBP14.77□□□□□ -0.05
RABGGTA-219ENST00000560871 PRAMEF9Q5VWM5 478 aa14.77□□□□□ -0.05
RABGGTA-219ENST00000560871 COX15Q7KZN9 410 aa14.77□□□□□ -0.05
RABGGTA-219ENST00000560871 MFSD9Q8NBP5 474 aa14.77□□□□□ -0.05
RABGGTA-219ENST00000560871 ZNF740Q8NDX6 193 aa14.77□□□□□ -0.05
RABGGTA-219ENST00000560871 ACMSDQ8TDX5 336 aa14.77□□□□□ -0.05
RABGGTA-219ENST00000560871 RERGQ96A58 199 aaPredicted RBP14.77□□□□□ -0.05
RABGGTA-219ENST00000560871 NLNQ9BYT8 704 aa14.77□□□□□ -0.05
RABGGTA-219ENST00000560871 COPG2Q9UBF2 871 aa14.77□□□□□ -0.05
RABGGTA-219ENST00000560871 TBK1Q9UHD2 729 aa14.77□□□□□ -0.05
RABGGTA-219ENST00000560871 KCND3Q9UK17 655 aa14.77□□□□□ -0.05
RABGGTA-219ENST00000560871 SMG1Q96Q15 3661 aaKnown RBP14.76□□□□□ -0.05
RABGGTA-219ENST00000560871 COL6A6A6NMZ7 2263 aa14.76□□□□□ -0.05
RABGGTA-219ENST00000560871 CNOT3O75175 753 aaKnown RBP14.76□□□□□ -0.05
RABGGTA-219ENST00000560871 CDH16O75309 829 aa14.76□□□□□ -0.05
RABGGTA-219ENST00000560871 RBP1P09455 135 aa14.76□□□□□ -0.05
RABGGTA-219ENST00000560871 SBK3P0C264 359 aa14.76□□□□□ -0.05
RABGGTA-219ENST00000560871 FAM87AP0C7U9 286 aa14.76□□□□□ -0.05
RABGGTA-219ENST00000560871 SFTPCP11686 197 aa14.76□□□□□ -0.05
RABGGTA-219ENST00000560871 GNAZP19086 355 aa14.76□□□□□ -0.05
RABGGTA-219ENST00000560871 AGXTP21549 392 aa14.76□□□□□ -0.05
RABGGTA-219ENST00000560871 VARSP26640 1264 aaKnown RBP14.76□□□□□ -0.05
RABGGTA-219ENST00000560871 PTPN4P29074 926 aa14.76□□□□□ -0.05
RABGGTA-219ENST00000560871 GRK3P35626 688 aa14.76□□□□□ -0.05
RABGGTA-219ENST00000560871 SLCO1A2P46721 670 aa14.76□□□□□ -0.05
RABGGTA-219ENST00000560871 RPS18P62269 152 aaKnown RBP14.76□□□□□ -0.05
RABGGTA-219ENST00000560871 DCDP81605 110 aaKnown RBP14.76□□□□□ -0.05
RABGGTA-219ENST00000560871 NFKB2Q00653 900 aa14.76□□□□□ -0.05
RABGGTA-219ENST00000560871 E2F2Q14209 437 aa14.76□□□□□ -0.05
RABGGTA-219ENST00000560871 PDK4Q16654 411 aa14.76□□□□□ -0.05
RABGGTA-219ENST00000560871 MUM1Q2TAK8 710 aa14.76□□□□□ -0.05
RABGGTA-219ENST00000560871 FAM214AQ32MH5 1076 aa14.76□□□□□ -0.05
RABGGTA-219ENST00000560871 NKAIN1Q4KMZ8 207 aa14.76□□□□□ -0.05
RABGGTA-219ENST00000560871 GARNL3Q5VVW2 1013 aa14.76□□□□□ -0.05
RABGGTA-219ENST00000560871 ATG9BQ674R7 924 aa14.76□□□□□ -0.05
RABGGTA-219ENST00000560871 MRPL14Q6P1L8 145 aaKnown RBP14.76□□□□□ -0.05
RABGGTA-219ENST00000560871 BORAQ6PGQ7 559 aa14.76□□□□□ -0.05
RABGGTA-219ENST00000560871 SLCO4C1Q6ZQN7 724 aa14.76□□□□□ -0.05
RABGGTA-219ENST00000560871 SH2D5Q6ZV89 423 aa14.76□□□□□ -0.05
RABGGTA-219ENST00000560871 ASPGQ86U10 573 aa14.76□□□□□ -0.05
RABGGTA-219ENST00000560871 LCA5Q86VQ0 697 aa14.76□□□□□ -0.05
RABGGTA-219ENST00000560871 CYP4X1Q8N118 509 aa14.76□□□□□ -0.05
RABGGTA-219ENST00000560871 TMEM151AQ8N4L1 468 aa14.76□□□□□ -0.05
RABGGTA-219ENST00000560871 ENDOVQ8N8Q3 282 aaKnown RBP14.76□□□□□ -0.05
RABGGTA-219ENST00000560871 ANKRD53Q8N9V6 530 aa14.76□□□□□ -0.05
RABGGTA-219ENST00000560871 OR2W6PQ8NHA6 318 aa14.76□□□□□ -0.05
RABGGTA-219ENST00000560871 WDR34Q96EX3 536 aa14.76□□□□□ -0.05
RABGGTA-219ENST00000560871 CATSPER2Q96P56 530 aa14.76□□□□□ -0.05
RABGGTA-219ENST00000560871 GPR87Q9BY21 358 aa14.76□□□□□ -0.05
RABGGTA-219ENST00000560871 MRPL46Q9H2W6 279 aaKnown RBP14.76□□□□□ -0.05
RABGGTA-219ENST00000560871 ACTL8Q9H568 366 aa14.76□□□□□ -0.05
RABGGTA-219ENST00000560871 HEATR5BQ9P2D3 2071 aa14.76□□□□□ -0.05
RABGGTA-219ENST00000560871 PCM1Q15154 2024 aa14.76□□□□□ -0.05
RABGGTA-219ENST00000560871 K7EPI3 171 aa14.75□□□□□ -0.05
RABGGTA-219ENST00000560871 TXNDC9O14530 226 aa14.75□□□□□ -0.05
RABGGTA-219ENST00000560871 FOXS1O43638 330 aa14.75□□□□□ -0.05
RABGGTA-219ENST00000560871 CCNT2O60583 730 aaKnown RBP14.75□□□□□ -0.05
RABGGTA-219ENST00000560871 STATHP02808 62 aa14.75□□□□□ -0.05
RABGGTA-219ENST00000560871 C1GALT1C1LP0DN25 315 aa14.75□□□□□ -0.05
RABGGTA-219ENST00000560871 GFAPP14136 432 aa14.75□□□□□ -0.05
RABGGTA-219ENST00000560871 ALAS2P22557 587 aa14.75□□□□□ -0.05
RABGGTA-219ENST00000560871 ALDH18A1P54886 795 aaKnown RBP14.75□□□□□ -0.05
RABGGTA-219ENST00000560871 MC1RQ01726 317 aa14.75□□□□□ -0.05
RABGGTA-219ENST00000560871 CDC20Q12834 499 aa14.75□□□□□ -0.05
RABGGTA-219ENST00000560871 SLC9A5Q14940 896 aa14.75□□□□□ -0.05
RABGGTA-219ENST00000560871 PFKFB4Q16877 469 aa14.75□□□□□ -0.05
RABGGTA-219ENST00000560871 TMEM214Q6NUQ4 689 aaKnown RBP14.75□□□□□ -0.05
RABGGTA-219ENST00000560871 SYVN1Q86TM6 617 aa14.75□□□□□ -0.05
RABGGTA-219ENST00000560871 METTL27Q8N6F8 245 aaPredicted RBP14.75□□□□□ -0.05
RABGGTA-219ENST00000560871 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.75□□□□□ -0.05
RABGGTA-219ENST00000560871 FKBP10Q96AY3 582 aa14.75□□□□□ -0.05
RABGGTA-219ENST00000560871 MVB12AQ96EY5 273 aa14.75□□□□□ -0.05
RABGGTA-219ENST00000560871 C17orf62Q9BQA9 187 aa14.75□□□□□ -0.05
RABGGTA-219ENST00000560871 AIF1LQ9BQI0 150 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms