RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 TTLL6Q8N841 843 aa6.52□□□□□ -1.37
TSPAN3-209ENST00000560715 RDM1Q8NG50 284 aa6.52□□□□□ -1.37
TSPAN3-209ENST00000560715 SNAPC3Q92966 411 aa6.52□□□□□ -1.37
TSPAN3-209ENST00000560715 RCN3Q96D15 328 aa6.52□□□□□ -1.37
TSPAN3-209ENST00000560715 SAMD8Q96LT4 415 aa6.52□□□□□ -1.37
TSPAN3-209ENST00000560715 MBOAT7Q96N66 472 aa6.52□□□□□ -1.37
TSPAN3-209ENST00000560715 SORT1Q99523 831 aa6.52□□□□□ -1.37
TSPAN3-209ENST00000560715 GLIS2Q9BZE0 524 aaPredicted RBP6.52□□□□□ -1.37
TSPAN3-209ENST00000560715 RAVER2Q9HCJ3 691 aaKnown RBP6.52□□□□□ -1.37
TSPAN3-209ENST00000560715 MRPL40Q9NQ50 206 aaKnown RBP6.52□□□□□ -1.37
TSPAN3-209ENST00000560715 TAS2R7Q9NYW3 318 aa6.52□□□□□ -1.37
TSPAN3-209ENST00000560715 IL37Q9NZH6 218 aa6.52□□□□□ -1.37
TSPAN3-209ENST00000560715 EIF3KQ9UBQ5 218 aaKnown RBP6.52□□□□□ -1.37
TSPAN3-209ENST00000560715 DIMT1Q9UNQ2 313 aaKnown RBP6.52□□□□□ -1.37
TSPAN3-209ENST00000560715 CLDN16Q9Y5I7 305 aa6.52□□□□□ -1.37
TSPAN3-209ENST00000560715 TMEM82A0PJX8 343 aa6.52□□□□□ -1.37
TSPAN3-209ENST00000560715 SAC3D1A6NKF1 404 aa6.52□□□□□ -1.37
TSPAN3-209ENST00000560715 SLC38A8A6NNN8 435 aa6.52□□□□□ -1.37
TSPAN3-209ENST00000560715 SLC22A2O15244 555 aa6.52□□□□□ -1.37
TSPAN3-209ENST00000560715 SLC37A4O43826 429 aa6.52□□□□□ -1.37
TSPAN3-209ENST00000560715 EDIL3O43854 480 aa6.52□□□□□ -1.37
TSPAN3-209ENST00000560715 CYTIPO60759 359 aa6.52□□□□□ -1.37
TSPAN3-209ENST00000560715 ATG13O75143 517 aa6.52□□□□□ -1.37
TSPAN3-209ENST00000560715 CDK14O94921 469 aa6.52□□□□□ -1.37
TSPAN3-209ENST00000560715 CLIC3O95833 236 aa6.52□□□□□ -1.37
TSPAN3-209ENST00000560715 GSRP00390 522 aa6.52□□□□□ -1.37
TSPAN3-209ENST00000560715 SERPINE1P05121 402 aa6.52□□□□□ -1.37
TSPAN3-209ENST00000560715 NFICP08651 508 aa6.52□□□□□ -1.37
TSPAN3-209ENST00000560715 LTA4HP09960 611 aaKnown RBP6.52□□□□□ -1.37
TSPAN3-209ENST00000560715 ENO3P13929 434 aaPredicted RBP6.52□□□□□ -1.37
TSPAN3-209ENST00000560715 GLDCP23378 1020 aa6.52□□□□□ -1.37
TSPAN3-209ENST00000560715 SDHAP31040 664 aa6.52□□□□□ -1.37
TSPAN3-209ENST00000560715 UQCRC1P31930 480 aa6.52□□□□□ -1.37
TSPAN3-209ENST00000560715 CSTF2P33240 577 aaKnown RBP eCLIP6.52□□□□□ -1.37
TSPAN3-209ENST00000560715 CAPGP40121 348 aa6.52□□□□□ -1.37
TSPAN3-209ENST00000560715 PSMD8P48556 350 aa6.52□□□□□ -1.37
TSPAN3-209ENST00000560715 MYL7Q01449 175 aa6.52□□□□□ -1.37
TSPAN3-209ENST00000560715 PTSQ03393 145 aa6.52□□□□□ -1.37
TSPAN3-209ENST00000560715 PRKCZQ05513 592 aa6.52□□□□□ -1.37
TSPAN3-209ENST00000560715 ART3Q13508 389 aa6.52□□□□□ -1.37
TSPAN3-209ENST00000560715 ANKRD22Q5VYY1 191 aa6.52□□□□□ -1.37
TSPAN3-209ENST00000560715 TMEM198Q66K66 360 aa6.52□□□□□ -1.37
TSPAN3-209ENST00000560715 EPGNQ6UW88 154 aa6.52□□□□□ -1.37
TSPAN3-209ENST00000560715 SPATA19Q7Z5L4 167 aa6.52□□□□□ -1.37
TSPAN3-209ENST00000560715 SLC22A9Q8IVM8 553 aa6.52□□□□□ -1.37
TSPAN3-209ENST00000560715 UBQLNLQ8IYU4 475 aa6.52□□□□□ -1.37
TSPAN3-209ENST00000560715 UNC5BQ8IZJ1 945 aa6.52□□□□□ -1.37
TSPAN3-209ENST00000560715 NLGN4XQ8N0W4 816 aa6.52□□□□□ -1.37
TSPAN3-209ENST00000560715 PDIK1LQ8N165 341 aa6.52□□□□□ -1.37
TSPAN3-209ENST00000560715 ATAD1Q8NBU5 361 aa6.52□□□□□ -1.37
TSPAN3-209ENST00000560715 CYGBQ8WWM9 190 aa6.52□□□□□ -1.37
TSPAN3-209ENST00000560715 MARC2Q969Z3 335 aa6.52□□□□□ -1.37
TSPAN3-209ENST00000560715 PPWD1Q96BP3 646 aaKnown RBP6.52□□□□□ -1.37
TSPAN3-209ENST00000560715 TTYH2Q9BSA4 534 aa6.52□□□□□ -1.37
TSPAN3-209ENST00000560715 SYT17Q9BSW7 474 aa6.52□□□□□ -1.37
TSPAN3-209ENST00000560715 PDZD7Q9H5P4 517 aa6.52□□□□□ -1.37
TSPAN3-209ENST00000560715 TASP1Q9H6P5 420 aa6.52□□□□□ -1.37
TSPAN3-209ENST00000560715 TDRD3Q9H7E2 651 aaKnown RBP6.52□□□□□ -1.37
TSPAN3-209ENST00000560715 ERVK13-1Q9NX77 482 aa6.52□□□□□ -1.37
TSPAN3-209ENST00000560715 PEMTQ9UBM1 199 aa6.52□□□□□ -1.37
TSPAN3-209ENST00000560715 UBE4BO95155 1302 aa6.52□□□□□ -1.37
TSPAN3-209ENST00000560715 ZNF780AO75290 641 aaPredicted RBP6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 VAPBO95292 243 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 CELF2O95319 508 aaKnown RBP6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 ITGB3P05106 788 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 SBK2P0C263 348 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 BMP3P12645 472 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 CD1EP15812 388 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 ARF4P18085 180 aaPredicted RBP6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 TCN1P20061 433 aaPredicted RBP6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 CYP3A5P20815 502 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 NOS3P29474 1203 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 BSGP35613 385 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 SREBF1P36956 1147 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 GABRB2P47870 512 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 OR2B6P58173 313 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 S100A12P80511 92 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 ZIK1Q3SY52 487 aaPredicted RBP6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 ARHGEF16Q5VV41 709 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 PLA2G4FQ68DD2 849 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 OR6B2Q6IFH4 312 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 PMF1Q6P1K2 205 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 MSANTD2Q6P1R3 559 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 ADCK1Q86TW2 530 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 OFCC1Q8IZS5 231 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 EID3Q8N140 333 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 SVOPQ8N4V2 548 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 CCNYQ8ND76 341 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 AKR7LQ8NHP1 331 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 LMO3Q8TAP4 145 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 TMEM171Q8WVE6 324 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 SELENOMQ8WWX9 145 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 KCNJ9Q92806 393 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 PRMT6Q96LA8 375 aaPredicted RBP6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 OPALINQ96PE5 141 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 KIFC1Q9BW19 673 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 TMEM117Q9H0C3 514 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 DSN1Q9H410 356 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 UBE2TQ9NPD8 197 aaPredicted RBP6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 BEX4Q9NWD9 120 aaPredicted RBP6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms