RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 IFT46Q9NQC8 304 aa13.07□□□□□ -0.32
TRAF3-208ENST00000560371 TFECO14948 347 aaPredicted RBP13.07□□□□□ -0.32
TRAF3-208ENST00000560371 BCHEP06276 602 aa13.07□□□□□ -0.32
TRAF3-208ENST00000560371 TSPAN5P62079 268 aa13.07□□□□□ -0.32
TRAF3-208ENST00000560371 OLIG2Q13516 323 aa13.07□□□□□ -0.32
TRAF3-208ENST00000560371 RUNX3Q13761 415 aa13.07□□□□□ -0.32
TRAF3-208ENST00000560371 GPR153Q6NV75 609 aa13.07□□□□□ -0.32
TRAF3-208ENST00000560371 PLET1Q6UQ28 207 aa13.07□□□□□ -0.32
TRAF3-208ENST00000560371 SLCO6A1Q86UG4 719 aa13.07□□□□□ -0.32
TRAF3-208ENST00000560371 OR4F6Q8NGB9 312 aa13.07□□□□□ -0.32
TRAF3-208ENST00000560371 C8orf33Q9H7E9 229 aaPredicted RBP13.07□□□□□ -0.32
TRAF3-208ENST00000560371 ABCB9Q9NP78 766 aa13.07□□□□□ -0.32
TRAF3-208ENST00000560371 MYADML2A6NDP7 307 aa13.07□□□□□ -0.32
TRAF3-208ENST00000560371 CXorf49A8MYA2 514 aaPredicted RBP13.07□□□□□ -0.32
TRAF3-208ENST00000560371 OR7A10O76100 309 aa13.07□□□□□ -0.32
TRAF3-208ENST00000560371 CA3P07451 260 aa13.07□□□□□ -0.32
TRAF3-208ENST00000560371 NR2C1P13056 603 aa13.07□□□□□ -0.32
TRAF3-208ENST00000560371 NTSR1P30989 418 aa13.07□□□□□ -0.32
TRAF3-208ENST00000560371 CDKN1CP49918 316 aaPredicted RBP13.07□□□□□ -0.32
TRAF3-208ENST00000560371 AP3S2P59780 193 aa13.07□□□□□ -0.32
TRAF3-208ENST00000560371 SMG8Q8ND04 991 aaKnown RBP13.07□□□□□ -0.32
TRAF3-208ENST00000560371 WDR92Q96MX6 357 aa13.07□□□□□ -0.32
TRAF3-208ENST00000560371 GPR22Q99680 433 aa13.07□□□□□ -0.32
TRAF3-208ENST00000560371 WDR12Q9GZL7 423 aaKnown RBP13.07□□□□□ -0.32
TRAF3-208ENST00000560371 OR51B5Q9H339 312 aa13.07□□□□□ -0.32
TRAF3-208ENST00000560371 NSUN3Q9H649 340 aaKnown RBP13.07□□□□□ -0.32
TRAF3-208ENST00000560371 MRM3Q9HC36 420 aaKnown RBP13.07□□□□□ -0.32
TRAF3-208ENST00000560371 MS4A12Q9NXJ0 267 aa13.07□□□□□ -0.32
TRAF3-208ENST00000560371 BTAF1O14981 1849 aa13.07□□□□□ -0.32
TRAF3-208ENST00000560371 SPAG17Q6Q759 2223 aa13.07□□□□□ -0.32
TRAF3-208ENST00000560371 BTN3A3O00478 584 aa13.07□□□□□ -0.32
TRAF3-208ENST00000560371 CDH1P12830 882 aa13.07□□□□□ -0.32
TRAF3-208ENST00000560371 HOXD13P35453 343 aa13.07□□□□□ -0.32
TRAF3-208ENST00000560371 TGFBIQ15582 683 aa13.07□□□□□ -0.32
TRAF3-208ENST00000560371 C17orf99Q6UX52 265 aa13.07□□□□□ -0.32
TRAF3-208ENST00000560371 GHDCQ8N2G8 530 aa13.07□□□□□ -0.32
TRAF3-208ENST00000560371 OR52E4Q8NGH9 312 aa13.07□□□□□ -0.32
TRAF3-208ENST00000560371 CHID1Q9BWS9 393 aa13.07□□□□□ -0.32
TRAF3-208ENST00000560371 OR8D2Q9GZM6 311 aa13.07□□□□□ -0.32
TRAF3-208ENST00000560371 MAGEE1Q9HCI5 957 aa13.07□□□□□ -0.32
TRAF3-208ENST00000560371 PADI2Q9Y2J8 665 aa13.07□□□□□ -0.32
TRAF3-208ENST00000560371 DAPL1A0PJW8 107 aa13.07□□□□□ -0.32
TRAF3-208ENST00000560371 SYPP08247 313 aa13.07□□□□□ -0.32
TRAF3-208ENST00000560371 ETV3P41162 512 aa13.07□□□□□ -0.32
TRAF3-208ENST00000560371 ZNF41P51814 821 aaPredicted RBP13.07□□□□□ -0.32
TRAF3-208ENST00000560371 ADAM8P78325 824 aa13.07□□□□□ -0.32
TRAF3-208ENST00000560371 LASP1Q14847 261 aaKnown RBP13.07□□□□□ -0.32
TRAF3-208ENST00000560371 EIF4HQ15056 248 aaKnown RBP13.07□□□□□ -0.32
TRAF3-208ENST00000560371 UTS2BQ765I0 119 aa13.07□□□□□ -0.32
TRAF3-208ENST00000560371 KIAA1191Q96A73 305 aa13.07□□□□□ -0.32
TRAF3-208ENST00000560371 B3GAT2Q9NPZ5 323 aa13.07□□□□□ -0.32
TRAF3-208ENST00000560371 HYKKA2RU49 373 aa13.07□□□□□ -0.32
TRAF3-208ENST00000560371 H7BY64 318 aa13.07□□□□□ -0.32
TRAF3-208ENST00000560371 XKP51811 444 aa13.07□□□□□ -0.32
TRAF3-208ENST00000560371 TXNL4AP83876 142 aaKnown RBP13.07□□□□□ -0.32
TRAF3-208ENST00000560371 DCAF12L1Q5VU92 463 aa13.07□□□□□ -0.32
TRAF3-208ENST00000560371 PNLDC1Q8NA58 520 aaKnown RBP13.07□□□□□ -0.32
TRAF3-208ENST00000560371 PROKR2Q8NFJ6 384 aa13.07□□□□□ -0.32
TRAF3-208ENST00000560371 PRAP1Q96NZ9 151 aa13.07□□□□□ -0.32
TRAF3-208ENST00000560371 LRP6O75581 1613 aa13.06□□□□□ -0.32
TRAF3-208ENST00000560371 SHOX2O60902 331 aaPredicted RBP13.06□□□□□ -0.32
TRAF3-208ENST00000560371 GATBO75879 557 aaKnown RBP13.06□□□□□ -0.32
TRAF3-208ENST00000560371 TXNDC5Q8NBS9 432 aaKnown RBP13.06□□□□□ -0.32
TRAF3-208ENST00000560371 SLCO2A1Q92959 643 aa13.06□□□□□ -0.32
TRAF3-208ENST00000560371 PNPLA2Q96AD5 504 aa13.06□□□□□ -0.32
TRAF3-208ENST00000560371 NKX2-4Q9H2Z4 354 aa13.06□□□□□ -0.32
TRAF3-208ENST00000560371 RIMKLBQ9ULI2 386 aa13.06□□□□□ -0.32
TRAF3-208ENST00000560371 A0A1W2PQU0 124 aa13.06□□□□□ -0.32
TRAF3-208ENST00000560371 GP1BBP13224 206 aa13.06□□□□□ -0.32
TRAF3-208ENST00000560371 VSX2P58304 361 aaPredicted RBP13.06□□□□□ -0.32
TRAF3-208ENST00000560371 HNRNPKP61978 463 aaKnown RBP eCLIP13.06□□□□□ -0.32
TRAF3-208ENST00000560371 SLC5A9Q2M3M2 681 aa13.06□□□□□ -0.32
TRAF3-208ENST00000560371 ASTE1Q2TB18 679 aaPredicted RBP13.06□□□□□ -0.32
TRAF3-208ENST00000560371 PRPF38BQ5VTL8 546 aaKnown RBP13.06□□□□□ -0.32
TRAF3-208ENST00000560371 PACS2Q86VP3 889 aa13.06□□□□□ -0.32
TRAF3-208ENST00000560371 FOXJ1Q92949 421 aa13.06□□□□□ -0.32
TRAF3-208ENST00000560371 PKP4Q99569 1192 aa13.06□□□□□ -0.32
TRAF3-208ENST00000560371 SLC29A3Q9BZD2 475 aa13.06□□□□□ -0.32
TRAF3-208ENST00000560371 GPN1Q9HCN4 374 aaPredicted RBP13.06□□□□□ -0.32
TRAF3-208ENST00000560371 TAS2R9Q9NYW1 312 aa13.06□□□□□ -0.32
TRAF3-208ENST00000560371 ZIM2Q9NZV7 527 aa13.06□□□□□ -0.32
TRAF3-208ENST00000560371 HCN2Q9UL51 889 aa13.06□□□□□ -0.32
TRAF3-208ENST00000560371 RAB26Q9ULW5 256 aa13.06□□□□□ -0.32
TRAF3-208ENST00000560371 POLR2AP24928 1970 aaKnown RBP13.06□□□□□ -0.32
TRAF3-208ENST00000560371 A0A1W2PRG6 482 aa13.06□□□□□ -0.32
TRAF3-208ENST00000560371 DUX1O43812 170 aa13.06□□□□□ -0.32
TRAF3-208ENST00000560371 PTPRCAPQ14761 206 aa13.06□□□□□ -0.32
TRAF3-208ENST00000560371 OR4F3Q6IEY1 312 aa13.06□□□□□ -0.32
TRAF3-208ENST00000560371 GOLGA7Q7Z5G4 137 aa13.06□□□□□ -0.32
TRAF3-208ENST00000560371 OR2L3Q8NG85 312 aa13.06□□□□□ -0.32
TRAF3-208ENST00000560371 LRTOMTQ8WZ04 291 aa13.06□□□□□ -0.32
TRAF3-208ENST00000560371 DIRAS2Q96HU8 199 aa13.06□□□□□ -0.32
TRAF3-208ENST00000560371 NKIRAS2Q9NYR9 191 aa13.06□□□□□ -0.32
TRAF3-208ENST00000560371 IGLON5A6NGN9 336 aa13.06□□□□□ -0.32
TRAF3-208ENST00000560371 FAM159BA6NKW6 160 aa13.06□□□□□ -0.32
TRAF3-208ENST00000560371 TGM5O43548 720 aa13.06□□□□□ -0.32
TRAF3-208ENST00000560371 STC2O76061 302 aa13.06□□□□□ -0.32
TRAF3-208ENST00000560371 BMP8BP34820 402 aa13.06□□□□□ -0.32
TRAF3-208ENST00000560371 MAP3K8P41279 467 aa13.06□□□□□ -0.32
TRAF3-208ENST00000560371 GBX2P52951 348 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms