RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 DRD4P21917 467 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 TGM1P22735 817 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 SERPINB3P29508 390 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 LSP1P33241 339 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 HOXD12P35452 270 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 NBL1P41271 181 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 RXRGP48443 463 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 SLC1A6P48664 564 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 PPM1FP49593 454 aaPredicted RBP5.02□□□□□ -1.61
SPG11-220ENST00000559933 RAB28P51157 221 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 SLC18A1P54219 525 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 DNAJB13P59910 316 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 ERVPABLB-1P60509 514 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 ABCE1P61221 599 aaKnown RBP5.02□□□□□ -1.61
SPG11-220ENST00000559933 HERVK_113P63132 956 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 CYP4F2P78329 520 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 CDKL1Q00532 357 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 PLOD1Q02809 727 aaPredicted RBP5.02□□□□□ -1.61
SPG11-220ENST00000559933 TAP2Q03519 686 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 CFHR1Q03591 330 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 ILF2Q12905 390 aaKnown RBP5.02□□□□□ -1.61
SPG11-220ENST00000559933 TRAF3Q13114 568 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 GTF2H2Q13888 395 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 SLBPQ14493 270 aaKnown RBP eCLIP5.02□□□□□ -1.61
SPG11-220ENST00000559933 KIR2DS5Q14953 304 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 PCBP2Q15366 365 aaKnown RBP eCLIP5.02□□□□□ -1.61
SPG11-220ENST00000559933 PDCD2Q16342 344 aaPredicted RBP5.02□□□□□ -1.61
SPG11-220ENST00000559933 NKG7Q16617 165 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 DEFB110Q30KQ9 67 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 AMZ1Q400G9 498 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 AASDHQ4L235 1098 aaPredicted RBP5.02□□□□□ -1.61
SPG11-220ENST00000559933 C14orf28Q4W4Y0 310 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 CCDC157Q569K6 752 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 CFAP157Q5JU67 520 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 SH2D4BQ5SQS7 431 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 CHCHD2P9Q5T1J5 151 aaPredicted RBP5.02□□□□□ -1.61
SPG11-220ENST00000559933 THEMIS2Q5TEJ8 643 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 VWA5B1Q5TIE3 1220 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 GTF2H2CQ6P1K8 395 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 WASH2PQ6VEQ5 465 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 TMEM26Q6ZUK4 368 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 DGLUCYQ7Z3D6 616 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 TMPRSS9Q7Z410 1059 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 MAVSQ7Z434 540 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 CCDC91Q7Z6B0 441 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 TMPRSS11BQ86T26 416 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 SLC9B2Q86UD5 537 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 LCA5Q86VQ0 697 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 AMIGO1Q86WK6 493 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 C17orf82Q86X59 251 aaPredicted RBP5.02□□□□□ -1.61
SPG11-220ENST00000559933 MYLK4Q86YV6 388 aaPredicted RBP5.02□□□□□ -1.61
SPG11-220ENST00000559933 KRTAP19-1Q8IUB9 90 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 ADGRF3Q8IZF5 1079 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 ARFGAP2Q8N6H7 521 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 ARL10Q8N8L6 244 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 CDYL2Q8N8U2 506 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 ZNF740Q8NDX6 193 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 GPR156Q8NFN8 814 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 OR56A3Q8NH54 315 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 OR4C6Q8NH72 309 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 RFWD2Q8NHY2 731 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 FLVCR1-AS1Q8TAF5 88 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 CEP76Q8TAP6 659 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 AGAP11Q8TF27 550 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 LCN9Q8WX39 176 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 NEIL2Q969S2 332 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 CCDC120Q96HB5 630 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 HIST1H2AHQ96KK5 128 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 APOLD1Q96LR9 279 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 MAGEB18Q96M61 343 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 CCDC138Q96M89 665 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 FCRL4Q96PJ5 515 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 HIST1H2AJQ99878 128 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 MACROD1Q9BQ69 325 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 NUDT22Q9BRQ3 303 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 H2AFJQ9BTM1 129 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 ERVK-6Q9BXR3 956 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 CAPS2Q9BXY5 557 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 TRIM54Q9BYV2 358 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 SRMSQ9H3Y6 488 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 MVB12BQ9H7P6 319 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 MANSC1Q9H8J5 431 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 ERVMER34-1Q9H9K5 563 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 MID1IP1Q9NPA3 183 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 WASH6PQ9NQA3 447 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 CCDC177Q9NQR7 707 aaPredicted RBP5.02□□□□□ -1.61
SPG11-220ENST00000559933 FARSBQ9NSD9 589 aaKnown RBP5.02□□□□□ -1.61
SPG11-220ENST00000559933 SEMA4GQ9NTN9 838 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 POT1Q9NUX5 634 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 NLGN3Q9NZ94 848 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 SPATA7Q9P0W8 599 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 LRIT1Q9P2V4 623 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 OPTCQ9UBM4 332 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 ZDHHC2Q9UIJ5 367 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 ADAM21Q9UKJ8 722 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 BTRCQ9Y297 605 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 RNF11Q9Y3C5 154 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 TIMM22Q9Y584 194 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 PCDHGA5Q9Y5G8 931 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 ASXL3Q9C0F0 2248 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms