RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 ALAS2P22557 587 aa19.35■□□□□ 0.69
TSPAN3-207ENST00000559494 SCTRP47872 440 aa19.35■□□□□ 0.69
TSPAN3-207ENST00000559494 REEP5Q00765 189 aa19.35■□□□□ 0.69
TSPAN3-207ENST00000559494 SLC18A2Q05940 514 aa19.35■□□□□ 0.69
TSPAN3-207ENST00000559494 ZNF844Q08AG5 666 aa19.35■□□□□ 0.69
TSPAN3-207ENST00000559494 BEND6Q5SZJ8 279 aaPredicted RBP19.35■□□□□ 0.69
TSPAN3-207ENST00000559494 YOD1Q5VVQ6 348 aaPredicted RBP19.35■□□□□ 0.69
TSPAN3-207ENST00000559494 ARHGEF39Q8N4T4 335 aa19.35■□□□□ 0.69
TSPAN3-207ENST00000559494 DTWD1Q8N5C7 304 aa19.35■□□□□ 0.69
TSPAN3-207ENST00000559494 TEX9Q8N6V9 391 aa19.35■□□□□ 0.69
TSPAN3-207ENST00000559494 CT55Q8WUE5 264 aa19.35■□□□□ 0.69
TSPAN3-207ENST00000559494 MACROD1Q9BQ69 325 aa19.35■□□□□ 0.69
TSPAN3-207ENST00000559494 AIF1LQ9BQI0 150 aa19.35■□□□□ 0.69
TSPAN3-207ENST00000559494 GEMIN8Q9NWZ8 242 aaKnown RBP19.35■□□□□ 0.69
TSPAN3-207ENST00000559494 IL17BQ9UHF5 180 aa19.35■□□□□ 0.69
TSPAN3-207ENST00000559494 EMCNQ9ULC0 261 aa19.35■□□□□ 0.69
TSPAN3-207ENST00000559494 TMCO1Q9UM00 188 aa19.35■□□□□ 0.69
TSPAN3-207ENST00000559494 RUVBL1Q9Y265 456 aaKnown RBP19.35■□□□□ 0.69
TSPAN3-207ENST00000559494 CLGNO14967 610 aa19.34■□□□□ 0.69
TSPAN3-207ENST00000559494 SMIM24O75264 130 aa19.34■□□□□ 0.69
TSPAN3-207ENST00000559494 H2AFYO75367 372 aaKnown RBP19.34■□□□□ 0.69
TSPAN3-207ENST00000559494 CAPN1P07384 714 aa19.34■□□□□ 0.69
TSPAN3-207ENST00000559494 KRT4P19013 534 aa19.34■□□□□ 0.69
TSPAN3-207ENST00000559494 CRHR1P34998 444 aa19.34■□□□□ 0.69
TSPAN3-207ENST00000559494 EMP3P54852 163 aa19.34■□□□□ 0.69
TSPAN3-207ENST00000559494 SNRPNP63162 240 aaKnown RBP19.34■□□□□ 0.69
TSPAN3-207ENST00000559494 DOC2AQ14183 400 aa19.34■□□□□ 0.69
TSPAN3-207ENST00000559494 BROXQ5VW32 411 aa19.34■□□□□ 0.69
TSPAN3-207ENST00000559494 TRABD2AQ86V40 505 aa19.34■□□□□ 0.69
TSPAN3-207ENST00000559494 C4orf33Q8N1A6 199 aa19.34■□□□□ 0.69
TSPAN3-207ENST00000559494 MYRIPQ8NFW9 859 aa19.34■□□□□ 0.69
TSPAN3-207ENST00000559494 PROKR1Q8TCW9 393 aa19.34■□□□□ 0.69
TSPAN3-207ENST00000559494 C10orf90Q96M02 699 aa19.34■□□□□ 0.69
TSPAN3-207ENST00000559494 ZIM3Q96PE6 472 aa19.34■□□□□ 0.69
TSPAN3-207ENST00000559494 RUFY1Q96T51 708 aa19.34■□□□□ 0.69
TSPAN3-207ENST00000559494 TXLNGQ9NUQ3 528 aa19.34■□□□□ 0.69
TSPAN3-207ENST00000559494 TNPO3Q9Y5L0 923 aaKnown RBP19.34■□□□□ 0.69
TSPAN3-207ENST00000559494 SCN3AQ9NY46 2000 aa19.33■□□□□ 0.69
TSPAN3-207ENST00000559494 STX16-NPEPL1H3BU86 382 aa19.33■□□□□ 0.69
TSPAN3-207ENST00000559494 TXNDC9O14530 226 aa19.33■□□□□ 0.69
TSPAN3-207ENST00000559494 STX16O14662 325 aa19.33■□□□□ 0.69
TSPAN3-207ENST00000559494 DSCR3O14972 297 aa19.33■□□□□ 0.69
TSPAN3-207ENST00000559494 GLRA3O75311 464 aa19.33■□□□□ 0.69
TSPAN3-207ENST00000559494 CD22P20273 847 aa19.33■□□□□ 0.69
TSPAN3-207ENST00000559494 ITGAXP20702 1163 aa19.33■□□□□ 0.69
TSPAN3-207ENST00000559494 EEF1DP29692 281 aaKnown RBP19.33■□□□□ 0.69
TSPAN3-207ENST00000559494 DLSTP36957 453 aa19.33■□□□□ 0.69
TSPAN3-207ENST00000559494 CASP2P42575 452 aa19.33■□□□□ 0.69
TSPAN3-207ENST00000559494 CCT5P48643 541 aa19.33■□□□□ 0.69
TSPAN3-207ENST00000559494 PCDH1Q08174 1060 aa19.33■□□□□ 0.69
TSPAN3-207ENST00000559494 CHIT1Q13231 466 aa19.33■□□□□ 0.69
TSPAN3-207ENST00000559494 SLBPQ14493 270 aaKnown RBP eCLIP19.33■□□□□ 0.69
TSPAN3-207ENST00000559494 RBBP5Q15291 538 aaKnown RBP19.33■□□□□ 0.69
TSPAN3-207ENST00000559494 XKR6Q5GH73 641 aa19.33■□□□□ 0.69
TSPAN3-207ENST00000559494 C19orf48Q6RUI8 117 aa19.33■□□□□ 0.69
TSPAN3-207ENST00000559494 ASPGQ86U10 573 aa19.33■□□□□ 0.69
TSPAN3-207ENST00000559494 ANKRD53Q8N9V6 530 aa19.33■□□□□ 0.69
TSPAN3-207ENST00000559494 SLC13A3Q8WWT9 602 aa19.33■□□□□ 0.69
TSPAN3-207ENST00000559494 MOCOSQ96EN8 888 aa19.33■□□□□ 0.69
TSPAN3-207ENST00000559494 WDR34Q96EX3 536 aa19.33■□□□□ 0.69
TSPAN3-207ENST00000559494 C12orf65Q9H3J6 166 aaKnown RBP19.33■□□□□ 0.69
TSPAN3-207ENST00000559494 EHD1Q9H4M9 534 aa19.33■□□□□ 0.69
TSPAN3-207ENST00000559494 GPN2Q9H9Y4 310 aaPredicted RBP19.33■□□□□ 0.69
TSPAN3-207ENST00000559494 CPNE5Q9HCH3 593 aa19.33■□□□□ 0.69
TSPAN3-207ENST00000559494 SLC22A11Q9NSA0 550 aa19.33■□□□□ 0.69
TSPAN3-207ENST00000559494 NDOR1Q9UHB4 597 aa19.33■□□□□ 0.69
TSPAN3-207ENST00000559494 A0A1B0GX78 115 aa19.32■□□□□ 0.68
TSPAN3-207ENST00000559494 A8MT66 165 aa19.32■□□□□ 0.68
TSPAN3-207ENST00000559494 E2F3O00716 465 aa19.32■□□□□ 0.68
TSPAN3-207ENST00000559494 DLX3O60479 287 aa19.32■□□□□ 0.68
TSPAN3-207ENST00000559494 WFS1O76024 890 aa19.32■□□□□ 0.68
TSPAN3-207ENST00000559494 EPB42P16452 691 aa19.32■□□□□ 0.68
TSPAN3-207ENST00000559494 AGXTP21549 392 aa19.32■□□□□ 0.68
TSPAN3-207ENST00000559494 DCDP81605 110 aaKnown RBP19.32■□□□□ 0.68
TSPAN3-207ENST00000559494 IRF8Q02556 426 aa19.32■□□□□ 0.68
TSPAN3-207ENST00000559494 DNASE1L3Q13609 305 aa19.32■□□□□ 0.68
TSPAN3-207ENST00000559494 GTF2H2Q13888 395 aa19.32■□□□□ 0.68
TSPAN3-207ENST00000559494 E2F2Q14209 437 aa19.32■□□□□ 0.68
TSPAN3-207ENST00000559494 TBCCQ15814 346 aa19.32■□□□□ 0.68
TSPAN3-207ENST00000559494 MUM1Q2TAK8 710 aa19.32■□□□□ 0.68
TSPAN3-207ENST00000559494 KRT71Q3SY84 523 aa19.32■□□□□ 0.68
TSPAN3-207ENST00000559494 GARNL3Q5VVW2 1013 aa19.32■□□□□ 0.68
TSPAN3-207ENST00000559494 GTF2H2CQ6P1K8 395 aa19.32■□□□□ 0.68
TSPAN3-207ENST00000559494 METTL2BQ6P1Q9 378 aaKnown RBP19.32■□□□□ 0.68
TSPAN3-207ENST00000559494 TBC1D19Q8N5T2 526 aa19.32■□□□□ 0.68
TSPAN3-207ENST00000559494 CAMKVQ8NCB2 501 aa19.32■□□□□ 0.68
TSPAN3-207ENST00000559494 ZDHHC19Q8WVZ1 309 aaPredicted RBP19.32■□□□□ 0.68
TSPAN3-207ENST00000559494 KIAA1143Q96AT1 154 aaPredicted RBP19.32■□□□□ 0.68
TSPAN3-207ENST00000559494 ZBTB9Q96C00 473 aa19.32■□□□□ 0.68
TSPAN3-207ENST00000559494 PTCD3Q96EY7 689 aaKnown RBP19.32■□□□□ 0.68
TSPAN3-207ENST00000559494 CRELD1Q96HD1 420 aa19.32■□□□□ 0.68
TSPAN3-207ENST00000559494 DPH2Q9BQC3 489 aaPredicted RBP19.32■□□□□ 0.68
TSPAN3-207ENST00000559494 NT5DC2Q9H857 520 aa19.32■□□□□ 0.68
TSPAN3-207ENST00000559494 COPG2Q9UBF2 871 aa19.32■□□□□ 0.68
TSPAN3-207ENST00000559494 ZFP69BQ9UJL9 534 aa19.32■□□□□ 0.68
TSPAN3-207ENST00000559494 GRID1Q9ULK0 1009 aa19.32■□□□□ 0.68
TSPAN3-207ENST00000559494 ZNF490Q9ULM2 529 aaPredicted RBP19.32■□□□□ 0.68
TSPAN3-207ENST00000559494 MRPS2Q9Y399 296 aaKnown RBP19.32■□□□□ 0.68
TSPAN3-207ENST00000559494 ANGPTL3Q9Y5C1 460 aa19.32■□□□□ 0.68
TSPAN3-207ENST00000559494 MRPS18BQ9Y676 258 aaKnown RBP19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms