RNA–Protein interactions for RNA: ENST00000559460.5

SMAD3-211, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-211ENST00000559460 FAF2Q96CS3 445 aa9.05□□□□□ -0.96
SMAD3-211ENST00000559460 RNF157Q96PX1 679 aa9.05□□□□□ -0.96
SMAD3-211ENST00000559460 C19orf24Q9BVV8 132 aa9.05□□□□□ -0.96
SMAD3-211ENST00000559460 DEFB126Q9BYW3 111 aa9.05□□□□□ -0.96
SMAD3-211ENST00000559460 YAE1D1Q9NRH1 226 aa9.05□□□□□ -0.96
SMAD3-211ENST00000559460 IMPACTQ9P2X3 320 aa9.05□□□□□ -0.96
SMAD3-211ENST00000559460 PCDHA3Q9Y5H8 950 aa9.05□□□□□ -0.96
SMAD3-211ENST00000559460 MRFAP1Q9Y605 127 aa9.05□□□□□ -0.96
SMAD3-211ENST00000559460 SLC5A10A0PJK1 596 aa9.04□□□□□ -0.96
SMAD3-211ENST00000559460 MBD3L4A6NDZ8 208 aaPredicted RBP9.04□□□□□ -0.96
SMAD3-211ENST00000559460 MBD3L5A6NJ08 208 aaPredicted RBP9.04□□□□□ -0.96
SMAD3-211ENST00000559460 EEF1E1-BLOC1S5C9J1V9 151 aa9.04□□□□□ -0.96
SMAD3-211ENST00000559460 H0YIG0 161 aa9.04□□□□□ -0.96
SMAD3-211ENST00000559460 AQP7O14520 342 aa9.04□□□□□ -0.96
SMAD3-211ENST00000559460 EEF1E1O43324 174 aaKnown RBP9.04□□□□□ -0.96
SMAD3-211ENST00000559460 FOXS1O43638 330 aa9.04□□□□□ -0.96
SMAD3-211ENST00000559460 TLX2O43763 284 aaPredicted RBP9.04□□□□□ -0.96
SMAD3-211ENST00000559460 NID1P14543 1247 aa9.04□□□□□ -0.96
SMAD3-211ENST00000559460 MLF1P58340 268 aa9.04□□□□□ -0.96
SMAD3-211ENST00000559460 UBXN1Q04323 297 aa9.04□□□□□ -0.96
SMAD3-211ENST00000559460 HSPA14Q0VDF9 509 aa9.04□□□□□ -0.96
SMAD3-211ENST00000559460 FAM53BQ14153 422 aa9.04□□□□□ -0.96
SMAD3-211ENST00000559460 KRT31Q15323 416 aa9.04□□□□□ -0.96
SMAD3-211ENST00000559460 NDUFAF5Q5TEU4 345 aa9.04□□□□□ -0.96
SMAD3-211ENST00000559460 GK5Q6ZS86 529 aa9.04□□□□□ -0.96
SMAD3-211ENST00000559460 ZNF227Q86WZ6 799 aa9.04□□□□□ -0.96
SMAD3-211ENST00000559460 CYP4X1Q8N118 509 aa9.04□□□□□ -0.96
SMAD3-211ENST00000559460 KIF2BQ8N4N8 673 aa9.04□□□□□ -0.96
SMAD3-211ENST00000559460 PLD5Q8N7P1 536 aa9.04□□□□□ -0.96
SMAD3-211ENST00000559460 OR51Q1Q8NH59 317 aa9.04□□□□□ -0.96
SMAD3-211ENST00000559460 SKA2Q8WVK7 121 aaPredicted RBP9.04□□□□□ -0.96
SMAD3-211ENST00000559460 TFB1MQ8WVM0 346 aaKnown RBP9.04□□□□□ -0.96
SMAD3-211ENST00000559460 RAD51AP1Q96B01 352 aa9.04□□□□□ -0.96
SMAD3-211ENST00000559460 LRRC45Q96CN5 670 aa9.04□□□□□ -0.96
SMAD3-211ENST00000559460 FCRL5Q96RD9 977 aa9.04□□□□□ -0.96
SMAD3-211ENST00000559460 DPH7Q9BTV6 452 aa9.04□□□□□ -0.96
SMAD3-211ENST00000559460 HAUS4Q9H6D7 363 aa9.04□□□□□ -0.96
SMAD3-211ENST00000559460 UBTD1Q9HAC8 227 aa9.04□□□□□ -0.96
SMAD3-211ENST00000559460 MRPS30Q9NP92 439 aaKnown RBP9.04□□□□□ -0.96
SMAD3-211ENST00000559460 HCN3Q9P1Z3 774 aa9.04□□□□□ -0.96
SMAD3-211ENST00000559460 RSPH14Q9UHP6 348 aa9.04□□□□□ -0.96
SMAD3-211ENST00000559460 ADGRE2Q9UHX3 823 aa9.04□□□□□ -0.96
SMAD3-211ENST00000559460 KLK4Q9Y5K2 254 aa9.04□□□□□ -0.96
SMAD3-211ENST00000559460 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.04□□□□□ -0.96
SMAD3-211ENST00000559460 LRRD1A4D1F6 860 aa9.03□□□□□ -0.96
SMAD3-211ENST00000559460 OR2A25A4D2G3 310 aa9.03□□□□□ -0.96
SMAD3-211ENST00000559460 NRP2O60462 931 aa9.03□□□□□ -0.96
SMAD3-211ENST00000559460 CDC123O75794 336 aaPredicted RBP9.03□□□□□ -0.96
SMAD3-211ENST00000559460 SIX3O95343 332 aaPredicted RBP9.03□□□□□ -0.96
SMAD3-211ENST00000559460 IL2RAP01589 272 aa9.03□□□□□ -0.96
SMAD3-211ENST00000559460 CDKN1CP49918 316 aaPredicted RBP9.03□□□□□ -0.96
SMAD3-211ENST00000559460 GEMP55040 296 aa9.03□□□□□ -0.96
SMAD3-211ENST00000559460 DYNLT1P63172 113 aa9.03□□□□□ -0.96
SMAD3-211ENST00000559460 TSTA3Q13630 321 aaPredicted RBP9.03□□□□□ -0.96
SMAD3-211ENST00000559460 TMED2Q15363 201 aa9.03□□□□□ -0.96
SMAD3-211ENST00000559460 KRTAP24-1Q3LI83 254 aa9.03□□□□□ -0.96
SMAD3-211ENST00000559460 MEI1Q5TIA1 1274 aa9.03□□□□□ -0.96
SMAD3-211ENST00000559460 NPNTQ6UXI9 565 aa9.03□□□□□ -0.96
SMAD3-211ENST00000559460 IRF2BP2Q7Z5L9 587 aa9.03□□□□□ -0.96
SMAD3-211ENST00000559460 ADCK2Q7Z695 626 aa9.03□□□□□ -0.96
SMAD3-211ENST00000559460 RFX6Q8HWS3 928 aa9.03□□□□□ -0.96
SMAD3-211ENST00000559460 FBXW8Q8N3Y1 598 aa9.03□□□□□ -0.96
SMAD3-211ENST00000559460 FAM109AQ8N4B1 249 aa9.03□□□□□ -0.96
SMAD3-211ENST00000559460 PSD4Q8NDX1 1056 aa9.03□□□□□ -0.96
SMAD3-211ENST00000559460 OR9A4Q8NGU2 314 aa9.03□□□□□ -0.96
SMAD3-211ENST00000559460 ELP5Q8TE02 316 aa9.03□□□□□ -0.96
SMAD3-211ENST00000559460 OXNAD1Q96HP4 312 aaPredicted RBP9.03□□□□□ -0.96
SMAD3-211ENST00000559460 DACH2Q96NX9 599 aa9.03□□□□□ -0.96
SMAD3-211ENST00000559460 ALS2CR12Q96Q35 445 aa9.03□□□□□ -0.96
SMAD3-211ENST00000559460 TTC1Q99614 292 aa9.03□□□□□ -0.96
SMAD3-211ENST00000559460 ACAT2Q9BWD1 397 aa9.03□□□□□ -0.96
SMAD3-211ENST00000559460 RBSNQ9H1K0 784 aa9.03□□□□□ -0.96
SMAD3-211ENST00000559460 ZDHHC11Q9H8X9 412 aa9.03□□□□□ -0.96
SMAD3-211ENST00000559460 KCMF1Q9P0J7 381 aa9.03□□□□□ -0.96
SMAD3-211ENST00000559460 ZNF629Q9UEG4 869 aaPredicted RBP9.03□□□□□ -0.96
SMAD3-211ENST00000559460 DRG1Q9Y295 367 aaKnown RBP9.03□□□□□ -0.96
SMAD3-211ENST00000559460 SNRNP200O75643 2136 aaKnown RBP9.02□□□□□ -0.96
SMAD3-211ENST00000559460 SH3D21A4FU49 640 aa9.02□□□□□ -0.97
SMAD3-211ENST00000559460 A8MVJ9 347 aa9.02□□□□□ -0.97
SMAD3-211ENST00000559460 ARHGEF33A8MVX0 844 aa9.02□□□□□ -0.97
SMAD3-211ENST00000559460 MAGEB17A8MXT2 336 aa9.02□□□□□ -0.97
SMAD3-211ENST00000559460 CCL22O00626 93 aa9.02□□□□□ -0.97
SMAD3-211ENST00000559460 SUSD5O60279 629 aa9.02□□□□□ -0.97
SMAD3-211ENST00000559460 ANXA9O76027 345 aa9.02□□□□□ -0.97
SMAD3-211ENST00000559460 NSA2O95478 260 aaKnown RBP9.02□□□□□ -0.97
SMAD3-211ENST00000559460 AGTP01019 485 aa9.02□□□□□ -0.97
SMAD3-211ENST00000559460 APOA4P06727 396 aa9.02□□□□□ -0.97
SMAD3-211ENST00000559460 FAM157CP0CG43 387 aa9.02□□□□□ -0.97
SMAD3-211ENST00000559460 EZRP15311 586 aaKnown RBP9.02□□□□□ -0.97
SMAD3-211ENST00000559460 KDELR1P24390 212 aa9.02□□□□□ -0.97
SMAD3-211ENST00000559460 CD68P34810 354 aaPredicted RBP9.02□□□□□ -0.97
SMAD3-211ENST00000559460 PTH2RP49190 550 aa9.02□□□□□ -0.97
SMAD3-211ENST00000559460 SSR4P51571 173 aa9.02□□□□□ -0.97
SMAD3-211ENST00000559460 KLHL30Q0D2K2 578 aa9.02□□□□□ -0.97
SMAD3-211ENST00000559460 ITIH4Q14624 930 aa9.02□□□□□ -0.97
SMAD3-211ENST00000559460 ACKR1Q16570 336 aa9.02□□□□□ -0.97
SMAD3-211ENST00000559460 DBN1Q16643 649 aa9.02□□□□□ -0.97
SMAD3-211ENST00000559460 DPCR1Q3MIW9 517 aa9.02□□□□□ -0.97
SMAD3-211ENST00000559460 WIPI1Q5MNZ9 446 aaPredicted RBP9.02□□□□□ -0.97
SMAD3-211ENST00000559460 KCTD11Q693B1 232 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms