RNA–Protein interactions for RNA: ENST00000558836.5

CUX1-217, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 2,965 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-217ENST00000558836 KAT7O95251 611 aa10.23□□□□□ -0.77
CUX1-217ENST00000558836 KCNK5O95279 499 aa10.23□□□□□ -0.77
CUX1-217ENST00000558836 FCARP24071 287 aa10.23□□□□□ -0.77
CUX1-217ENST00000558836 EEF1B2P24534 225 aaKnown RBP10.23□□□□□ -0.77
CUX1-217ENST00000558836 PSMB5P28074 263 aa10.23□□□□□ -0.77
CUX1-217ENST00000558836 CLCN2P51788 898 aa10.23□□□□□ -0.77
CUX1-217ENST00000558836 MAPK10P53779 464 aa10.23□□□□□ -0.77
CUX1-217ENST00000558836 ZNF385BQ569K4 471 aa10.23□□□□□ -0.77
CUX1-217ENST00000558836 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.23□□□□□ -0.778e-7■■■■■ 33
CUX1-217ENST00000558836 MED27Q6P2C8 311 aa10.23□□□□□ -0.77
CUX1-217ENST00000558836 C11orf24Q96F05 449 aaPredicted RBP10.23□□□□□ -0.77
CUX1-217ENST00000558836 TPD52L3Q96J77 140 aa10.23□□□□□ -0.77
CUX1-217ENST00000558836 ZDHHC5Q9C0B5 715 aa10.23□□□□□ -0.77
CUX1-217ENST00000558836 TPT1P8Q9HAU6 139 aa10.23□□□□□ -0.77
CUX1-217ENST00000558836 DPP7Q9UHL4 492 aa10.23□□□□□ -0.77
CUX1-217ENST00000558836 EXO1Q9UQ84 846 aaKnown RBP10.23□□□□□ -0.77
CUX1-217ENST00000558836 CEPT1Q9Y6K0 416 aa10.23□□□□□ -0.77
CUX1-217ENST00000558836 A0A1W2PP55 124 aa10.23□□□□□ -0.77
CUX1-217ENST00000558836 SOBPA7XYQ1 873 aa10.23□□□□□ -0.77
CUX1-217ENST00000558836 FAM220BPB1ANY3 271 aa10.23□□□□□ -0.77
CUX1-217ENST00000558836 RTCAO00442 366 aaKnown RBP10.23□□□□□ -0.77
CUX1-217ENST00000558836 UGDHO60701 494 aa10.23□□□□□ -0.77
CUX1-217ENST00000558836 MITFO75030 526 aaPredicted RBP10.23□□□□□ -0.77
CUX1-217ENST00000558836 EPN2O95208 641 aa10.23□□□□□ -0.77
CUX1-217ENST00000558836 STATHP02808 62 aa10.23□□□□□ -0.77
CUX1-217ENST00000558836 KLK1P06870 262 aa10.23□□□□□ -0.77
CUX1-217ENST00000558836 IL7RP16871 459 aa10.23□□□□□ -0.77
CUX1-217ENST00000558836 PIGFQ07326 219 aa10.23□□□□□ -0.77
CUX1-217ENST00000558836 ABHD18Q0P651 414 aa10.23□□□□□ -0.77
CUX1-217ENST00000558836 MTAPQ13126 283 aa10.23□□□□□ -0.77
CUX1-217ENST00000558836 GAB1Q13480 694 aa10.23□□□□□ -0.77
CUX1-217ENST00000558836 RUNX3Q13761 415 aa10.23□□□□□ -0.77
CUX1-217ENST00000558836 NEDD8Q15843 81 aa10.23□□□□□ -0.77
CUX1-217ENST00000558836 ABRAXAS1Q6UWZ7 409 aa10.23□□□□□ -0.77
CUX1-217ENST00000558836 FAM20CQ8IXL6 584 aa10.23□□□□□ -0.77
CUX1-217ENST00000558836 AADATQ8N5Z0 425 aa10.23□□□□□ -0.77
CUX1-217ENST00000558836 TNIP2Q8NFZ5 429 aa10.23□□□□□ -0.77
CUX1-217ENST00000558836 OR5AK3PQ8NH89 298 aa10.23□□□□□ -0.77
CUX1-217ENST00000558836 HCAR2Q8TDS4 363 aa10.23□□□□□ -0.77
CUX1-217ENST00000558836 PYURFQ96I23 114 aa10.23□□□□□ -0.77
CUX1-217ENST00000558836 PPP1R16AQ96I34 528 aa10.23□□□□□ -0.77
CUX1-217ENST00000558836 REXO5Q96IC2 774 aaKnown RBP10.23□□□□□ -0.77
CUX1-217ENST00000558836 HAUS8Q9BT25 410 aa10.23□□□□□ -0.77
CUX1-217ENST00000558836 OSBPL6Q9BZF3 934 aa10.23□□□□□ -0.77
CUX1-217ENST00000558836 ADNPQ9H2P0 1102 aa10.23□□□□□ -0.77
CUX1-217ENST00000558836 DNAJB9Q9UBS3 223 aa10.23□□□□□ -0.77
CUX1-217ENST00000558836 ACSL6Q9UKU0 697 aa10.23□□□□□ -0.77
CUX1-217ENST00000558836 DYRK1BQ9Y463 629 aa10.23□□□□□ -0.77
CUX1-217ENST00000558836 PLXND1Q9Y4D7 1925 aa10.22□□□□□ -0.77
CUX1-217ENST00000558836 PIPSLA2A3N6 862 aa10.22□□□□□ -0.77
CUX1-217ENST00000558836 TMX2-CTNND1H3BSU7 103 aa10.22□□□□□ -0.77
CUX1-217ENST00000558836 SCAMP2O15127 329 aaKnown RBP10.22□□□□□ -0.77
CUX1-217ENST00000558836 PRSS23O95084 383 aa10.22□□□□□ -0.77
CUX1-217ENST00000558836 FKBP9O95302 570 aa10.22□□□□□ -0.77
CUX1-217ENST00000558836 THRBP10828 461 aa10.22□□□□□ -0.77
CUX1-217ENST00000558836 CYP4B1P13584 511 aa10.22□□□□□ -0.77
CUX1-217ENST00000558836 ACPPP15309 386 aa10.22□□□□□ -0.77
CUX1-217ENST00000558836 CDH2P19022 906 aaPredicted RBP10.22□□□□□ -0.77
CUX1-217ENST00000558836 SLC5A2P31639 672 aa10.22□□□□□ -0.77
CUX1-217ENST00000558836 DRD3P35462 400 aa10.22□□□□□ -0.77
CUX1-217ENST00000558836 TAS2R38P59533 333 aa10.22□□□□□ -0.77
CUX1-217ENST00000558836 ADARB1P78563 741 aaKnown RBP10.22□□□□□ -0.77
CUX1-217ENST00000558836 SRSF11Q05519 484 aaKnown RBP10.22□□□□□ -0.77
CUX1-217ENST00000558836 ADRM1Q16186 407 aa10.22□□□□□ -0.77
CUX1-217ENST00000558836 CYP27C1Q4G0S4 372 aa10.22□□□□□ -0.77
CUX1-217ENST00000558836 PIP5KL1Q5T9C9 394 aa10.22□□□□□ -0.77
CUX1-217ENST00000558836 FKBP9P1Q75LS8 142 aa10.22□□□□□ -0.77
CUX1-217ENST00000558836 COMMD6Q7Z4G1 85 aa10.22□□□□□ -0.77
CUX1-217ENST00000558836 PATL1Q86TB9 770 aaKnown RBP10.22□□□□□ -0.77
CUX1-217ENST00000558836 PTOV1Q86YD1 416 aa10.22□□□□□ -0.77
CUX1-217ENST00000558836 FGF14Q92915 247 aa10.22□□□□□ -0.77
CUX1-217ENST00000558836 SDCCAG3Q96C92 435 aa10.22□□□□□ -0.77
CUX1-217ENST00000558836 HHIPQ96QV1 700 aa10.22□□□□□ -0.77
CUX1-217ENST00000558836 ZCCHC2Q9C0B9 1178 aaKnown RBP10.22□□□□□ -0.77
CUX1-217ENST00000558836 AMBRA1Q9C0C7 1298 aa10.22□□□□□ -0.77
CUX1-217ENST00000558836 ING2Q9H160 280 aa10.22□□□□□ -0.77
CUX1-217ENST00000558836 FZD4Q9ULV1 537 aa10.22□□□□□ -0.77
CUX1-217ENST00000558836 CCDC88CQ9P219 2028 aa10.22□□□□□ -0.77
CUX1-217ENST00000558836 A0A1B0GVG6 124 aa10.22□□□□□ -0.77
CUX1-217ENST00000558836 FEZF1A0PJY2 475 aa10.22□□□□□ -0.77
CUX1-217ENST00000558836 OPN1SWP03999 348 aa10.22□□□□□ -0.77
CUX1-217ENST00000558836 TNFRSF1BP20333 461 aa10.22□□□□□ -0.77
CUX1-217ENST00000558836 IDSP22304 550 aa10.22□□□□□ -0.77
CUX1-217ENST00000558836 DCTP40126 519 aa10.22□□□□□ -0.77
CUX1-217ENST00000558836 PNLIPRP1P54315 467 aa10.22□□□□□ -0.77
CUX1-217ENST00000558836 PDGFRLQ15198 375 aa10.22□□□□□ -0.77
CUX1-217ENST00000558836 DUSP6Q16828 381 aa10.22□□□□□ -0.77
CUX1-217ENST00000558836 WSCD2Q2TBF2 565 aa10.22□□□□□ -0.77
CUX1-217ENST00000558836 CEP68Q76N32 757 aa10.22□□□□□ -0.77
CUX1-217ENST00000558836 AMZ2Q86W34 360 aa10.22□□□□□ -0.77
CUX1-217ENST00000558836 PLD3Q8IV08 490 aa10.22□□□□□ -0.77
CUX1-217ENST00000558836 ZDHHC21Q8IVQ6 265 aa10.22□□□□□ -0.77
CUX1-217ENST00000558836 NAGSQ8N159 534 aa10.22□□□□□ -0.77
CUX1-217ENST00000558836 CHTF18Q8WVB6 975 aa10.22□□□□□ -0.77
CUX1-217ENST00000558836 SLC5A11Q8WWX8 675 aa10.22□□□□□ -0.77
CUX1-217ENST00000558836 TFGQ92734 400 aaPredicted RBP10.22□□□□□ -0.77
CUX1-217ENST00000558836 MTIF3Q9H2K0 278 aaKnown RBP10.22□□□□□ -0.77
CUX1-217ENST00000558836 OSGEPL1Q9H4B0 414 aa10.22□□□□□ -0.77
CUX1-217ENST00000558836 SPASTQ9UBP0 616 aa10.22□□□□□ -0.77
CUX1-217ENST00000558836 COMMD3-BMI1R4GMX3 469 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms