RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 VIPP01282 170 aa11.98□□□□□ -0.49
SHMT2-233ENST00000557529 CHRM5P08912 532 aaPredicted RBP11.98□□□□□ -0.49
SHMT2-233ENST00000557529 ANXA4P09525 319 aaPredicted RBP11.98□□□□□ -0.49
SHMT2-233ENST00000557529 HSD17B1P14061 328 aa11.98□□□□□ -0.49
SHMT2-233ENST00000557529 EEFSECP57772 596 aaKnown RBP11.98□□□□□ -0.49
SHMT2-233ENST00000557529 AP2B1P63010 937 aa11.98□□□□□ -0.49
SHMT2-233ENST00000557529 CCNIQ14094 377 aa11.98□□□□□ -0.49
SHMT2-233ENST00000557529 TRIM25Q14258 630 aaKnown RBP11.98□□□□□ -0.49
SHMT2-233ENST00000557529 CAPRIN1Q14444 709 aaKnown RBP11.98□□□□□ -0.49
SHMT2-233ENST00000557529 KIR2DS3Q14952 304 aa11.98□□□□□ -0.49
SHMT2-233ENST00000557529 TCEA2Q15560 299 aa11.98□□□□□ -0.49
SHMT2-233ENST00000557529 SF1Q15637 639 aaKnown RBP11.98□□□□□ -0.49
SHMT2-233ENST00000557529 VN1R5Q7Z5H4 357 aa11.98□□□□□ -0.49
SHMT2-233ENST00000557529 ADCK2Q7Z695 626 aa11.98□□□□□ -0.49
SHMT2-233ENST00000557529 TAF8Q7Z7C8 310 aa11.98□□□□□ -0.49
SHMT2-233ENST00000557529 SLC15A3Q8IY34 581 aa11.98□□□□□ -0.49
SHMT2-233ENST00000557529 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.98□□□□□ -0.492e-6■■■■■ 41.4
SHMT2-233ENST00000557529 METTL4Q8N3J2 472 aa11.98□□□□□ -0.49
SHMT2-233ENST00000557529 RNF148Q8N7C7 305 aa11.98□□□□□ -0.49
SHMT2-233ENST00000557529 GPR156Q8NFN8 814 aa11.98□□□□□ -0.49
SHMT2-233ENST00000557529 OR2L3Q8NG85 312 aa11.98□□□□□ -0.49
SHMT2-233ENST00000557529 OR4E2Q8NGC2 313 aa11.98□□□□□ -0.49
SHMT2-233ENST00000557529 OR52E6Q96RD3 313 aa11.98□□□□□ -0.49
SHMT2-233ENST00000557529 PRPF18Q99633 342 aaKnown RBP11.98□□□□□ -0.49
SHMT2-233ENST00000557529 CGREF1Q99674 301 aa11.98□□□□□ -0.49
SHMT2-233ENST00000557529 SLC39A3Q9BRY0 314 aa11.98□□□□□ -0.49
SHMT2-233ENST00000557529 CENPKQ9BS16 269 aa11.98□□□□□ -0.49
SHMT2-233ENST00000557529 OR51B5Q9H339 312 aa11.98□□□□□ -0.49
SHMT2-233ENST00000557529 STX18Q9P2W9 335 aaKnown RBP11.98□□□□□ -0.49
SHMT2-233ENST00000557529 APOBEC3BQ9UH17 382 aaKnown RBP11.98□□□□□ -0.49
SHMT2-233ENST00000557529 MUTYHQ9UIF7 546 aa11.98□□□□□ -0.49
SHMT2-233ENST00000557529 PACSIN3Q9UKS6 424 aa11.98□□□□□ -0.49
SHMT2-233ENST00000557529 ANGPTL2Q9UKU9 493 aa11.98□□□□□ -0.49
SHMT2-233ENST00000557529 SNX7Q9UNH6 387 aa11.98□□□□□ -0.49
SHMT2-233ENST00000557529 AP3M1Q9Y2T2 418 aa11.98□□□□□ -0.49
SHMT2-233ENST00000557529 PCDHA9Q9Y5H5 950 aa11.98□□□□□ -0.49
SHMT2-233ENST00000557529 PRAMEF33A0A0G2JMD5 474 aa11.97□□□□□ -0.49
SHMT2-233ENST00000557529 GNG14A0A1W2PPG7 69 aa11.97□□□□□ -0.49
SHMT2-233ENST00000557529 FAM221BA6H8Z2 402 aa11.97□□□□□ -0.49
SHMT2-233ENST00000557529 PRORSD1PA6NEY8 169 aa11.97□□□□□ -0.49
SHMT2-233ENST00000557529 H0Y3Z8 333 aa11.97□□□□□ -0.49
SHMT2-233ENST00000557529 K7ESF4 209 aa11.97□□□□□ -0.49
SHMT2-233ENST00000557529 NME4O00746 187 aa11.97□□□□□ -0.49
SHMT2-233ENST00000557529 DNAJA2O60884 412 aa11.97□□□□□ -0.49
SHMT2-233ENST00000557529 CLEC3AO75596 197 aa11.97□□□□□ -0.49
SHMT2-233ENST00000557529 CSF2P04141 144 aa11.97□□□□□ -0.49
SHMT2-233ENST00000557529 DCNP07585 359 aaKnown RBP11.97□□□□□ -0.49
SHMT2-233ENST00000557529 NME1P15531 152 aaKnown RBP11.97□□□□□ -0.49
SHMT2-233ENST00000557529 JUNDP17535 347 aa11.97□□□□□ -0.49
SHMT2-233ENST00000557529 HOXA6P31267 233 aa11.97□□□□□ -0.49
SHMT2-233ENST00000557529 HPCAL1P37235 193 aa11.97□□□□□ -0.49
SHMT2-233ENST00000557529 RPL3P39023 403 aaKnown RBP11.97□□□□□ -0.49
SHMT2-233ENST00000557529 KIR3DL1P43629 444 aa11.97□□□□□ -0.49
SHMT2-233ENST00000557529 HNRNPFP52597 415 aaKnown RBP11.97□□□□□ -0.49
SHMT2-233ENST00000557529 YBX1P67809 324 aaKnown RBP11.97□□□□□ -0.49
SHMT2-233ENST00000557529 RAE1P78406 368 aaKnown RBP11.97□□□□□ -0.49
SHMT2-233ENST00000557529 ZNF763Q0D2J5 394 aa11.97□□□□□ -0.49
SHMT2-233ENST00000557529 BNIP2Q12982 314 aa11.97□□□□□ -0.49
SHMT2-233ENST00000557529 PLCL1Q15111 1095 aa11.97□□□□□ -0.49
SHMT2-233ENST00000557529 RCN1Q15293 331 aa11.97□□□□□ -0.49
SHMT2-233ENST00000557529 PGS1Q32NB8 556 aa11.97□□□□□ -0.49
SHMT2-233ENST00000557529 PRRT3Q5FWE3 981 aa11.97□□□□□ -0.49
SHMT2-233ENST00000557529 DEPDC1Q5TB30 811 aa11.97□□□□□ -0.49
SHMT2-233ENST00000557529 KHDRBS2Q5VWX1 349 aaKnown RBP11.97□□□□□ -0.49
SHMT2-233ENST00000557529 DLEU7Q6UYE1 221 aa11.97□□□□□ -0.49
SHMT2-233ENST00000557529 ARMCX6Q7L4S7 300 aa11.97□□□□□ -0.49
SHMT2-233ENST00000557529 PAGE2Q7Z2X7 111 aa11.97□□□□□ -0.49
SHMT2-233ENST00000557529 COMMD6Q7Z4G1 85 aa11.97□□□□□ -0.49
SHMT2-233ENST00000557529 GPR180Q86V85 440 aa11.97□□□□□ -0.49
SHMT2-233ENST00000557529 RBM12BQ8IXT5 1001 aaKnown RBP11.97□□□□□ -0.49
SHMT2-233ENST00000557529 DEFB119Q8N690 84 aa11.97□□□□□ -0.49
SHMT2-233ENST00000557529 AVL9Q8NBF6 648 aa11.97□□□□□ -0.49
SHMT2-233ENST00000557529 OR8J3Q8NGG0 315 aa11.97□□□□□ -0.49
SHMT2-233ENST00000557529 GTF2H4Q92759 462 aa11.97□□□□□ -0.49
SHMT2-233ENST00000557529 TMEM125Q96AQ2 219 aa11.97□□□□□ -0.49
SHMT2-233ENST00000557529 ITCHQ96J02 903 aa11.97□□□□□ -0.49
SHMT2-233ENST00000557529 QRFPRQ96P65 431 aa11.97□□□□□ -0.49
SHMT2-233ENST00000557529 SH3GL1Q99961 368 aa11.97□□□□□ -0.49
SHMT2-233ENST00000557529 MS4A8Q9BY19 250 aa11.97□□□□□ -0.49
SHMT2-233ENST00000557529 KCNH6Q9H252 994 aa11.97□□□□□ -0.49
SHMT2-233ENST00000557529 TCEAL2Q9H3H9 227 aaPredicted RBP11.97□□□□□ -0.49
SHMT2-233ENST00000557529 MUC13Q9H3R2 512 aa11.97□□□□□ -0.49
SHMT2-233ENST00000557529 CMTM6Q9NX76 183 aa11.97□□□□□ -0.49
SHMT2-233ENST00000557529 STOML1Q9UBI4 398 aa11.97□□□□□ -0.49
SHMT2-233ENST00000557529 KLF15Q9UIH9 416 aa11.97□□□□□ -0.49
SHMT2-233ENST00000557529 MCM8Q9UJA3 840 aa11.97□□□□□ -0.49
SHMT2-233ENST00000557529 INVSQ9Y283 1065 aa11.97□□□□□ -0.49
SHMT2-233ENST00000557529 MAN2B2Q9Y2E5 1009 aa11.97□□□□□ -0.49
SHMT2-233ENST00000557529 WBP11Q9Y2W2 641 aaKnown RBP11.97□□□□□ -0.49
SHMT2-233ENST00000557529 LRP4O75096 1905 aa11.97□□□□□ -0.49
SHMT2-233ENST00000557529 TRBV23OR9-2A0A075B6M9 112 aa11.96□□□□□ -0.49
SHMT2-233ENST00000557529 IGKV1-8A0A0C4DH67 115 aa11.96□□□□□ -0.49
SHMT2-233ENST00000557529 CCDC163A0A0D9SF12 145 aa11.96□□□□□ -0.49
SHMT2-233ENST00000557529 ISM1B1AKI9 464 aa11.96□□□□□ -0.49
SHMT2-233ENST00000557529 TLR4O00206 839 aa11.96□□□□□ -0.49
SHMT2-233ENST00000557529 ACOT8O14734 319 aa11.96□□□□□ -0.49
SHMT2-233ENST00000557529 SCAMP2O15127 329 aaKnown RBP11.96□□□□□ -0.49
SHMT2-233ENST00000557529 MAP3K7O43318 606 aa11.96□□□□□ -0.49
SHMT2-233ENST00000557529 AKAP10O43572 662 aa11.96□□□□□ -0.49
SHMT2-233ENST00000557529 OR1F1O43749 312 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms