RNA–Protein interactions for RNA: ENST00000557487.5

SHMT2-232, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 1,918 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-232ENST00000557487 BTNL2Q9UIR0 455 aa15.76■□□□□ 0.11
SHMT2-232ENST00000557487 NOD1Q9Y239 953 aa15.76■□□□□ 0.11
SHMT2-232ENST00000557487 COCHO43405 550 aa15.75■□□□□ 0.11
SHMT2-232ENST00000557487 KCNK2O95069 426 aa15.75■□□□□ 0.11
SHMT2-232ENST00000557487 ALPIP09923 528 aa15.75■□□□□ 0.11
SHMT2-232ENST00000557487 JUPP14923 745 aa15.75■□□□□ 0.11
SHMT2-232ENST00000557487 ZNF24P17028 368 aa15.75■□□□□ 0.11
SHMT2-232ENST00000557487 CASP3P42574 277 aa15.75■□□□□ 0.11
SHMT2-232ENST00000557487 TUFMP49411 452 aaKnown RBP15.75■□□□□ 0.11
SHMT2-232ENST00000557487 SGSHP51688 502 aa15.75■□□□□ 0.11
SHMT2-232ENST00000557487 UGT2B15P54855 530 aa15.75■□□□□ 0.11
SHMT2-232ENST00000557487 WNT3P56703 355 aa15.75■□□□□ 0.11
SHMT2-232ENST00000557487 KCNJ10P78508 379 aa15.75■□□□□ 0.11
SHMT2-232ENST00000557487 UGT8Q16880 541 aa15.75■□□□□ 0.11
SHMT2-232ENST00000557487 ZNF362Q5T0B9 420 aaPredicted RBP15.75■□□□□ 0.11
SHMT2-232ENST00000557487 LINGO4Q6UY18 593 aa15.75■□□□□ 0.11
SHMT2-232ENST00000557487 METTL3Q86U44 580 aaKnown RBP15.75■□□□□ 0.11
SHMT2-232ENST00000557487 RTN4RL1Q86UN2 441 aaPredicted RBP15.75■□□□□ 0.11
SHMT2-232ENST00000557487 DCAF4L2Q8NA75 395 aa15.75■□□□□ 0.11
SHMT2-232ENST00000557487 ATL1Q8WXF7 558 aa15.75■□□□□ 0.11
SHMT2-232ENST00000557487 GGHQ92820 318 aa15.75■□□□□ 0.11
SHMT2-232ENST00000557487 ZNF486Q96H40 463 aaPredicted RBP15.75■□□□□ 0.11
SHMT2-232ENST00000557487 RUBCNLQ9H714 662 aa15.75■□□□□ 0.11
SHMT2-232ENST00000557487 DNAJC11Q9NVH1 559 aa15.75■□□□□ 0.11
SHMT2-232ENST00000557487 SIRT5Q9NXA8 310 aa15.75■□□□□ 0.11
SHMT2-232ENST00000557487 ZDHHC3Q9NYG2 299 aa15.75■□□□□ 0.11
SHMT2-232ENST00000557487 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.75■□□□□ 0.11
SHMT2-232ENST00000557487 RUVBL1Q9Y265 456 aaKnown RBP15.75■□□□□ 0.11
SHMT2-232ENST00000557487 CFL2Q9Y281 166 aa15.75■□□□□ 0.11
SHMT2-232ENST00000557487 VWA8A3KMH1 1905 aa15.75■□□□□ 0.11
SHMT2-232ENST00000557487 KIAA0100Q14667 2235 aaKnown RBP15.75■□□□□ 0.11
SHMT2-232ENST00000557487 DSCR3O14972 297 aa15.74■□□□□ 0.11
SHMT2-232ENST00000557487 DIRAS1O95057 198 aa15.74■□□□□ 0.11
SHMT2-232ENST00000557487 DBTP11182 482 aaKnown RBP15.74■□□□□ 0.11
SHMT2-232ENST00000557487 HSD3B1P14060 373 aa15.74■□□□□ 0.11
SHMT2-232ENST00000557487 COX7A2P14406 83 aa15.74■□□□□ 0.11
SHMT2-232ENST00000557487 BPIP17213 487 aa15.74■□□□□ 0.11
SHMT2-232ENST00000557487 ATF6P18850 670 aa15.74■□□□□ 0.11
SHMT2-232ENST00000557487 POLR2EP19388 210 aaKnown RBP15.74■□□□□ 0.11
SHMT2-232ENST00000557487 HSD3B2P26439 372 aa15.74■□□□□ 0.11
SHMT2-232ENST00000557487 ASMTP46597 345 aa15.74■□□□□ 0.11
SHMT2-232ENST00000557487 AP1S2P56377 157 aa15.74■□□□□ 0.11
SHMT2-232ENST00000557487 BCL2L1Q07817 233 aa15.74■□□□□ 0.11
SHMT2-232ENST00000557487 IRF3Q14653 427 aa15.74■□□□□ 0.11
SHMT2-232ENST00000557487 CHRNA6Q15825 494 aa15.74■□□□□ 0.11
SHMT2-232ENST00000557487 CDKN3Q16667 212 aa15.74■□□□□ 0.11
SHMT2-232ENST00000557487 SPANXN2Q5MJ10 180 aa15.74■□□□□ 0.11
SHMT2-232ENST00000557487 ANXA8L1Q5VT79 327 aa15.74■□□□□ 0.11
SHMT2-232ENST00000557487 LIPJQ5W064 366 aa15.74■□□□□ 0.11
SHMT2-232ENST00000557487 PDE12Q6L8Q7 609 aaKnown RBP15.74■□□□□ 0.11
SHMT2-232ENST00000557487 UBE2R2Q712K3 238 aaPredicted RBP15.74■□□□□ 0.11
SHMT2-232ENST00000557487 CAMKMTQ7Z624 323 aa15.74■□□□□ 0.11
SHMT2-232ENST00000557487 ZNF605Q86T29 641 aa15.74■□□□□ 0.11
SHMT2-232ENST00000557487 MMAAQ8IVH4 418 aaKnown RBP15.74■□□□□ 0.11
SHMT2-232ENST00000557487 FLCNQ8NFG4 579 aa15.74■□□□□ 0.11
SHMT2-232ENST00000557487 SETD6Q8TBK2 473 aa15.74■□□□□ 0.11
SHMT2-232ENST00000557487 CCDC97Q96F63 343 aaPredicted RBP15.74■□□□□ 0.11
SHMT2-232ENST00000557487 LYSMD1Q96S90 227 aa15.74■□□□□ 0.11
SHMT2-232ENST00000557487 GPR62Q9BZJ7 368 aa15.74■□□□□ 0.11
SHMT2-232ENST00000557487 TPT1P8Q9HAU6 139 aa15.74■□□□□ 0.11
SHMT2-232ENST00000557487 CRNNQ9UBG3 495 aaPredicted RBP15.74■□□□□ 0.11
SHMT2-232ENST00000557487 POU2F3Q9UKI9 436 aa15.74■□□□□ 0.11
SHMT2-232ENST00000557487 MPZL2O60487 215 aa15.74■□□□□ 0.11
SHMT2-232ENST00000557487 TSPAN3O60637 253 aa15.74■□□□□ 0.11
SHMT2-232ENST00000557487 GJB5O95377 273 aa15.74■□□□□ 0.11
SHMT2-232ENST00000557487 ASGR1P07306 291 aa15.74■□□□□ 0.11
SHMT2-232ENST00000557487 ALDH9A1P49189 494 aa15.74■□□□□ 0.11
SHMT2-232ENST00000557487 MLLT1Q03111 559 aaPredicted RBP15.74■□□□□ 0.11
SHMT2-232ENST00000557487 KCNC3Q14003 757 aa15.74■□□□□ 0.11
SHMT2-232ENST00000557487 METTL4Q8N3J2 472 aa15.74■□□□□ 0.11
SHMT2-232ENST00000557487 CHST8Q9H2A9 424 aa15.74■□□□□ 0.11
SHMT2-232ENST00000557487 TMEM161AQ9NX61 479 aa15.74■□□□□ 0.11
SHMT2-232ENST00000557487 TRAPPC4Q9Y296 219 aa15.74■□□□□ 0.11
SHMT2-232ENST00000557487 GRIP1Q9Y3R0 1128 aa15.74■□□□□ 0.11
SHMT2-232ENST00000557487 PCDHGB6Q9Y5F9 930 aa15.74■□□□□ 0.11
SHMT2-232ENST00000557487 OR51B4Q9Y5P0 310 aa15.74■□□□□ 0.11
SHMT2-232ENST00000557487 LYVE1Q9Y5Y7 322 aa15.74■□□□□ 0.11
SHMT2-232ENST00000557487 PLXNA4Q9HCM2 1894 aa15.73■□□□□ 0.11
SHMT2-232ENST00000557487 A0A075B6Q4 140 aa15.73■□□□□ 0.11
SHMT2-232ENST00000557487 A0A0U1RQS6 177 aa15.73■□□□□ 0.11
SHMT2-232ENST00000557487 SH3D21A4FU49 640 aa15.73■□□□□ 0.11
SHMT2-232ENST00000557487 EFCAB10A6NFE3 127 aa15.73■□□□□ 0.11
SHMT2-232ENST00000557487 TNFRSF11BO00300 401 aa15.73■□□□□ 0.11
SHMT2-232ENST00000557487 ADAMTS4O75173 837 aa15.73■□□□□ 0.11
SHMT2-232ENST00000557487 LRATO95237 230 aa15.73■□□□□ 0.11
SHMT2-232ENST00000557487 OR56A5P0C7T3 313 aa15.73■□□□□ 0.11
SHMT2-232ENST00000557487 ITGA2P17301 1181 aa15.73■□□□□ 0.11
SHMT2-232ENST00000557487 CYP2A7P20853 494 aa15.73■□□□□ 0.11
SHMT2-232ENST00000557487 AOAHP28039 575 aa15.73■□□□□ 0.11
SHMT2-232ENST00000557487 RRM2P31350 389 aa15.73■□□□□ 0.11
SHMT2-232ENST00000557487 RGS6P49758 472 aa15.73■□□□□ 0.11
SHMT2-232ENST00000557487 PRSS36Q5K4E3 855 aa15.73■□□□□ 0.11
SHMT2-232ENST00000557487 C10orf62Q5T681 223 aaPredicted RBP15.73■□□□□ 0.11
SHMT2-232ENST00000557487 ZDHHC20Q5W0Z9 365 aa15.73■□□□□ 0.11
SHMT2-232ENST00000557487 DESI1Q6ICB0 168 aa15.73■□□□□ 0.11
SHMT2-232ENST00000557487 RETSATQ6NUM9 610 aa15.73■□□□□ 0.11
SHMT2-232ENST00000557487 MBOAT1Q6ZNC8 495 aa15.73■□□□□ 0.11
SHMT2-232ENST00000557487 TPGS1Q6ZTW0 290 aa15.73■□□□□ 0.11
SHMT2-232ENST00000557487 C16orf59Q7L2K0 433 aa15.73■□□□□ 0.11
SHMT2-232ENST00000557487 FAM124AQ86V42 546 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms