RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 METTL21AQ8WXB1 218 aa13.3□□□□□ -0.28
SLIRP-210ENST00000557431 TSLPQ969D9 159 aa13.3□□□□□ -0.28
SLIRP-210ENST00000557431 CYTH2Q99418 400 aa13.3□□□□□ -0.28
SLIRP-210ENST00000557431 KIFC1Q9BW19 673 aa13.3□□□□□ -0.28
SLIRP-210ENST00000557431 RUBCNLQ9H714 662 aa13.3□□□□□ -0.28
SLIRP-210ENST00000557431 FBXO6Q9NRD1 293 aaPredicted RBP13.3□□□□□ -0.28
SLIRP-210ENST00000557431 GUCA1BQ9UMX6 200 aa13.3□□□□□ -0.28
SLIRP-210ENST00000557431 SOX13Q9UN79 622 aa13.3□□□□□ -0.28
SLIRP-210ENST00000557431 NPIPA1Q9UND3 350 aa13.3□□□□□ -0.28
SLIRP-210ENST00000557431 MED16Q9Y2X0 877 aa13.3□□□□□ -0.28
SLIRP-210ENST00000557431 FREM3P0C091 2139 aa13.3□□□□□ -0.28
SLIRP-210ENST00000557431 DCHS2Q6V1P9 2916 aa13.29□□□□□ -0.28
SLIRP-210ENST00000557431 RDH16O75452 317 aa13.29□□□□□ -0.28
SLIRP-210ENST00000557431 CCNDBP1O95273 360 aa13.29□□□□□ -0.28
SLIRP-210ENST00000557431 B3GALT4O96024 378 aa13.29□□□□□ -0.28
SLIRP-210ENST00000557431 EZRP15311 586 aaKnown RBP13.29□□□□□ -0.28
SLIRP-210ENST00000557431 IMPA1P29218 277 aa13.29□□□□□ -0.28
SLIRP-210ENST00000557431 ATP5DP30049 168 aa13.29□□□□□ -0.28
SLIRP-210ENST00000557431 PTGER4P35408 488 aa13.29□□□□□ -0.28
SLIRP-210ENST00000557431 COILP38432 576 aaPredicted RBP13.29□□□□□ -0.28
SLIRP-210ENST00000557431 NPY2RP49146 381 aa13.29□□□□□ -0.28
SLIRP-210ENST00000557431 CLCN7P51798 805 aa13.29□□□□□ -0.28
SLIRP-210ENST00000557431 RBPJQ06330 500 aa13.29□□□□□ -0.28
SLIRP-210ENST00000557431 NAA25Q14CX7 972 aa13.29□□□□□ -0.28
SLIRP-210ENST00000557431 OR1C1Q15619 314 aa13.29□□□□□ -0.28
SLIRP-210ENST00000557431 ACER2Q5QJU3 275 aa13.29□□□□□ -0.28
SLIRP-210ENST00000557431 MRNIPQ6NTE8 343 aa13.29□□□□□ -0.28
SLIRP-210ENST00000557431 RPTNQ6XPR3 784 aa13.29□□□□□ -0.28
SLIRP-210ENST00000557431 PIWIL4Q7Z3Z4 852 aaKnown RBP13.29□□□□□ -0.28
SLIRP-210ENST00000557431 SDCCAG8Q86SQ7 713 aaPredicted RBP13.29□□□□□ -0.28
SLIRP-210ENST00000557431 PRELID2Q8N945 189 aa13.29□□□□□ -0.28
SLIRP-210ENST00000557431 ADAMTS18Q8TE60 1221 aa13.29□□□□□ -0.28
SLIRP-210ENST00000557431 ALKBH8Q96BT7 664 aaKnown RBP13.29□□□□□ -0.28
SLIRP-210ENST00000557431 EIF2B3Q9NR50 452 aaKnown RBP13.29□□□□□ -0.28
SLIRP-210ENST00000557431 TTI1O43156 1089 aa13.28□□□□□ -0.28
SLIRP-210ENST00000557431 DNAJB6O75190 326 aa13.28□□□□□ -0.28
SLIRP-210ENST00000557431 ESR1P03372 595 aa13.28□□□□□ -0.28
SLIRP-210ENST00000557431 CD96P40200 585 aa13.28□□□□□ -0.28
SLIRP-210ENST00000557431 ALDH6A1Q02252 535 aaKnown RBP13.28□□□□□ -0.28
SLIRP-210ENST00000557431 CTBP1Q13363 440 aa13.28□□□□□ -0.28
SLIRP-210ENST00000557431 FAM53BQ14153 422 aa13.28□□□□□ -0.28
SLIRP-210ENST00000557431 NDUFA9Q16795 377 aa13.28□□□□□ -0.28
SLIRP-210ENST00000557431 LONRF1Q17RB8 773 aa13.28□□□□□ -0.28
SLIRP-210ENST00000557431 ZNF468Q5VIY5 522 aaPredicted RBP13.28□□□□□ -0.28
SLIRP-210ENST00000557431 ANKRD22Q5VYY1 191 aa13.28□□□□□ -0.28
SLIRP-210ENST00000557431 KIAA0930Q6ICG6 404 aaPredicted RBP13.28□□□□□ -0.28
SLIRP-210ENST00000557431 ZNF549Q6P9A3 640 aa13.28□□□□□ -0.28
SLIRP-210ENST00000557431 PAPD4Q6PIY7 484 aaKnown RBP13.28□□□□□ -0.28
SLIRP-210ENST00000557431 GSTA5Q7RTV2 222 aa13.28□□□□□ -0.28
SLIRP-210ENST00000557431 GALNTL5Q7Z4T8 443 aa13.28□□□□□ -0.28
SLIRP-210ENST00000557431 PDSS2Q86YH6 399 aa13.28□□□□□ -0.28
SLIRP-210ENST00000557431 CPNE9Q8IYJ1 553 aa13.28□□□□□ -0.28
SLIRP-210ENST00000557431 KIF2BQ8N4N8 673 aa13.28□□□□□ -0.28
SLIRP-210ENST00000557431 SPC24Q8NBT2 197 aa13.28□□□□□ -0.28
SLIRP-210ENST00000557431 KCT2Q8NC54 265 aa13.28□□□□□ -0.28
SLIRP-210ENST00000557431 OR5T3Q8NGG3 340 aa13.28□□□□□ -0.28
SLIRP-210ENST00000557431 ZNF669Q96BR6 464 aaPredicted RBP13.28□□□□□ -0.28
SLIRP-210ENST00000557431 MTFMTQ96DP5 389 aaKnown RBP13.28□□□□□ -0.28
SLIRP-210ENST00000557431 PEX11GQ96HA9 241 aa13.28□□□□□ -0.28
SLIRP-210ENST00000557431 MAGED4Q96JG8 741 aa13.28□□□□□ -0.28
SLIRP-210ENST00000557431 ZNF354BQ96LW1 612 aa13.28□□□□□ -0.28
SLIRP-210ENST00000557431 GPR137Q96N19 417 aa13.28□□□□□ -0.28
SLIRP-210ENST00000557431 FRMD6Q96NE9 622 aa13.28□□□□□ -0.28
SLIRP-210ENST00000557431 FRMD8P1Q9BZ68 369 aaPredicted RBP13.28□□□□□ -0.28
SLIRP-210ENST00000557431 CHST11Q9NPF2 352 aa13.28□□□□□ -0.28
SLIRP-210ENST00000557431 FAM114A2Q9NRY5 505 aa13.28□□□□□ -0.28
SLIRP-210ENST00000557431 NCKAP5O14513 1909 aa13.28□□□□□ -0.28
SLIRP-210ENST00000557431 CELSR1Q9NYQ6 3014 aa13.28□□□□□ -0.28
SLIRP-210ENST00000557431 ARHGAP21Q5T5U3 1957 aa13.27□□□□□ -0.28
SLIRP-210ENST00000557431 CTAGE9A4FU28 777 aa13.27□□□□□ -0.29
SLIRP-210ENST00000557431 GABRR3A8MPY1 467 aa13.27□□□□□ -0.29
SLIRP-210ENST00000557431 LCMT2O60294 686 aaKnown RBP13.27□□□□□ -0.29
SLIRP-210ENST00000557431 PHF2O75151 1096 aa13.27□□□□□ -0.29
SLIRP-210ENST00000557431 KRT38O76015 456 aa13.27□□□□□ -0.29
SLIRP-210ENST00000557431 NSA2O95478 260 aaKnown RBP13.27□□□□□ -0.29
SLIRP-210ENST00000557431 ICAM2P13598 275 aa13.27□□□□□ -0.29
SLIRP-210ENST00000557431 OGNP20774 298 aaKnown RBP13.27□□□□□ -0.29
SLIRP-210ENST00000557431 CASP6P55212 293 aa13.27□□□□□ -0.29
SLIRP-210ENST00000557431 RIPPLY3P57055 190 aa13.27□□□□□ -0.29
SLIRP-210ENST00000557431 TBPL1P62380 186 aa13.27□□□□□ -0.29
SLIRP-210ENST00000557431 OLR1P78380 273 aa13.27□□□□□ -0.29
SLIRP-210ENST00000557431 OC90Q02509 493 aaPredicted RBP13.27□□□□□ -0.29
SLIRP-210ENST00000557431 ARHGAP19Q14CB8 494 aa13.27□□□□□ -0.29
SLIRP-210ENST00000557431 SFT2D3Q587I9 215 aa13.27□□□□□ -0.29
SLIRP-210ENST00000557431 RNF187Q5TA31 235 aaPredicted RBP13.27□□□□□ -0.29
SLIRP-210ENST00000557431 PLAG1Q6DJT9 500 aa13.27□□□□□ -0.29
SLIRP-210ENST00000557431 ZNF470Q6ECI4 717 aa13.27□□□□□ -0.29
SLIRP-210ENST00000557431 H3F3CQ6NXT2 135 aa13.27□□□□□ -0.29
SLIRP-210ENST00000557431 CASC4Q6P4E1 433 aa13.27□□□□□ -0.29
SLIRP-210ENST00000557431 CYHR1Q6ZMK1 362 aa13.27□□□□□ -0.29
SLIRP-210ENST00000557431 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.27□□□□□ -0.29
SLIRP-210ENST00000557431 SPPL2CQ8IUH8 684 aa13.27□□□□□ -0.29
SLIRP-210ENST00000557431 CILP2Q8IUL8 1156 aa13.27□□□□□ -0.29
SLIRP-210ENST00000557431 GPR21Q99679 349 aa13.27□□□□□ -0.29
SLIRP-210ENST00000557431 TEKT2Q9UIF3 430 aa13.27□□□□□ -0.29
SLIRP-210ENST00000557431 ADAMTS6Q9UKP5 1117 aa13.27□□□□□ -0.29
SLIRP-210ENST00000557431 ZNF835Q9Y2P0 537 aa13.27□□□□□ -0.29
SLIRP-210ENST00000557431 H0YIG0 161 aa13.26□□□□□ -0.29
SLIRP-210ENST00000557431 H3BMM5 538 aa13.26□□□□□ -0.29
SLIRP-210ENST00000557431 CLDN14O95500 239 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms