RNA–Protein interactions for RNA: ENST00000557427.5

SHMT2-230, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-230ENST00000557427 ITLN2Q8WWU7 325 aaPredicted RBP12.02□□□□□ -0.49
SHMT2-230ENST00000557427 TSPAN17Q96FV3 270 aa12.02□□□□□ -0.49
SHMT2-230ENST00000557427 FERD3LQ96RJ6 166 aa12.02□□□□□ -0.49
SHMT2-230ENST00000557427 CCM2Q9BSQ5 444 aa12.02□□□□□ -0.49
SHMT2-230ENST00000557427 C20orf27Q9GZN8 174 aa12.02□□□□□ -0.49
SHMT2-230ENST00000557427 CHST8Q9H2A9 424 aa12.02□□□□□ -0.49
SHMT2-230ENST00000557427 LATS2Q9NRM7 1088 aa12.02□□□□□ -0.49
SHMT2-230ENST00000557427 ZNF358Q9NW07 568 aa12.02□□□□□ -0.49
SHMT2-230ENST00000557427 HEY2Q9UBP5 337 aa12.02□□□□□ -0.49
SHMT2-230ENST00000557427 G3BP2Q9UN86 482 aaKnown RBP12.02□□□□□ -0.49
SHMT2-230ENST00000557427 PRSS21Q9Y6M0 314 aa12.02□□□□□ -0.49
SHMT2-230ENST00000557427 PIKFYVEQ9Y2I7 2098 aa12.02□□□□□ -0.49
SHMT2-230ENST00000557427 MYO7BQ6PIF6 2116 aa12.01□□□□□ -0.49
SHMT2-230ENST00000557427 IGHV5-51A0A0C4DH38 117 aa12.01□□□□□ -0.49
SHMT2-230ENST00000557427 TRBV5-4A0A0C4DH59 114 aa12.01□□□□□ -0.49
SHMT2-230ENST00000557427 H7C0S8 307 aa12.01□□□□□ -0.49
SHMT2-230ENST00000557427 PHGDHO43175 533 aaKnown RBP12.01□□□□□ -0.49
SHMT2-230ENST00000557427 TRIM13O60858 407 aa12.01□□□□□ -0.49
SHMT2-230ENST00000557427 HAUS5O94927 633 aa12.01□□□□□ -0.49
SHMT2-230ENST00000557427 KLHL2O95198 593 aa12.01□□□□□ -0.49
SHMT2-230ENST00000557427 GOT2P00505 430 aaKnown RBP12.01□□□□□ -0.49
SHMT2-230ENST00000557427 F7P08709 466 aaPredicted RBP12.01□□□□□ -0.49
SHMT2-230ENST00000557427 SLC35G4P0C7Q5 338 aa12.01□□□□□ -0.49
SHMT2-230ENST00000557427 MTHFD1P11586 935 aaKnown RBP12.01□□□□□ -0.49
SHMT2-230ENST00000557427 PDHA2P29803 388 aa12.01□□□□□ -0.49
SHMT2-230ENST00000557427 SLC12A2P55011 1212 aa12.01□□□□□ -0.49
SHMT2-230ENST00000557427 TAS2R39P59534 338 aa12.01□□□□□ -0.49
SHMT2-230ENST00000557427 ABCE1P61221 599 aaKnown RBP12.01□□□□□ -0.49
SHMT2-230ENST00000557427 PPP1CAP62136 330 aa12.01□□□□□ -0.49
SHMT2-230ENST00000557427 TUBB3Q13509 450 aa12.01□□□□□ -0.49
SHMT2-230ENST00000557427 ATP1A4Q13733 1029 aa12.01□□□□□ -0.49
SHMT2-230ENST00000557427 LRRC8EQ6NSJ5 796 aa12.01□□□□□ -0.49
SHMT2-230ENST00000557427 NAPRTQ6XQN6 538 aa12.01□□□□□ -0.49
SHMT2-230ENST00000557427 ZCCHC23Q6ZST2 131 aa12.01□□□□□ -0.49
SHMT2-230ENST00000557427 CLNKQ7Z7G1 428 aa12.01□□□□□ -0.49
SHMT2-230ENST00000557427 MTDHQ86UE4 582 aaKnown RBP12.01□□□□□ -0.49
SHMT2-230ENST00000557427 WDR75Q8IWA0 830 aaKnown RBP12.01□□□□□ -0.49
SHMT2-230ENST00000557427 CENPLQ8N0S6 344 aaPredicted RBP12.01□□□□□ -0.49
SHMT2-230ENST00000557427 ENDOVQ8N8Q3 282 aaKnown RBP12.01□□□□□ -0.49
SHMT2-230ENST00000557427 OR4E2Q8NGC2 313 aa12.01□□□□□ -0.49
SHMT2-230ENST00000557427 PIWIL2Q8TC59 973 aaKnown RBP12.01□□□□□ -0.49
SHMT2-230ENST00000557427 PPP4R1Q8TF05 950 aa12.01□□□□□ -0.49
SHMT2-230ENST00000557427 MR1Q95460 341 aa12.01□□□□□ -0.49
SHMT2-230ENST00000557427 KLHL29Q96CT2 875 aa12.01□□□□□ -0.49
SHMT2-230ENST00000557427 ZDHHC12Q96GR4 267 aa12.01□□□□□ -0.49
SHMT2-230ENST00000557427 LINC00615Q96LM1 132 aaPredicted RBP12.01□□□□□ -0.49
SHMT2-230ENST00000557427 FCRL4Q96PJ5 515 aa12.01□□□□□ -0.49
SHMT2-230ENST00000557427 C19orf43Q9BQ61 176 aa12.01□□□□□ -0.49
SHMT2-230ENST00000557427 ZNF552Q9H707 407 aaPredicted RBP12.01□□□□□ -0.49
SHMT2-230ENST00000557427 PDE7BQ9NP56 450 aa12.01□□□□□ -0.49
SHMT2-230ENST00000557427 FBXO6Q9NRD1 293 aaPredicted RBP12.01□□□□□ -0.49
SHMT2-230ENST00000557427 OXSMQ9NWU1 459 aa12.01□□□□□ -0.49
SHMT2-230ENST00000557427 HRASLS2Q9NWW9 162 aa12.01□□□□□ -0.49
SHMT2-230ENST00000557427 RARRES3Q9UL19 164 aa12.01□□□□□ -0.49
SHMT2-230ENST00000557427 TCFL5Q9UL49 500 aa12.01□□□□□ -0.49
SHMT2-230ENST00000557427 RUVBL2Q9Y230 463 aaKnown RBP12.01□□□□□ -0.49
SHMT2-230ENST00000557427 CSAG2Q9Y5P2 127 aa12.01□□□□□ -0.49
SHMT2-230ENST00000557427 COLEC10Q9Y6Z7 277 aa12.01□□□□□ -0.49
SHMT2-230ENST00000557427 C17orf113A0A1B0GUU1 675 aa12□□□□□ -0.49
SHMT2-230ENST00000557427 KLHL33A6NCF5 533 aa12□□□□□ -0.49
SHMT2-230ENST00000557427 TARM1B6A8C7 271 aa12□□□□□ -0.49
SHMT2-230ENST00000557427 ITM2AO43736 263 aa12□□□□□ -0.49
SHMT2-230ENST00000557427 OR1I1O60431 355 aa12□□□□□ -0.49
SHMT2-230ENST00000557427 S1PR4O95977 384 aa12□□□□□ -0.49
SHMT2-230ENST00000557427 CAPN1P07384 714 aa12□□□□□ -0.49
SHMT2-230ENST00000557427 NQO1P15559 274 aaKnown RBP12□□□□□ -0.49
SHMT2-230ENST00000557427 ALOX15P16050 662 aaPredicted RBP12□□□□□ -0.49
SHMT2-230ENST00000557427 GMPRP36959 345 aa12□□□□□ -0.49
SHMT2-230ENST00000557427 SLC26A3P40879 764 aa12□□□□□ -0.49
SHMT2-230ENST00000557427 CAPZBP47756 277 aa12□□□□□ -0.49
SHMT2-230ENST00000557427 PREPP48147 710 aa12□□□□□ -0.49
SHMT2-230ENST00000557427 PRLHRP49683 370 aa12□□□□□ -0.49
SHMT2-230ENST00000557427 RASSF2P50749 326 aa12□□□□□ -0.49
SHMT2-230ENST00000557427 HK2P52789 917 aa12□□□□□ -0.49
SHMT2-230ENST00000557427 ASPHQ12797 758 aa12□□□□□ -0.49
SHMT2-230ENST00000557427 KRT72Q14CN4 511 aa12□□□□□ -0.49
SHMT2-230ENST00000557427 ZNF630Q2M218 657 aaPredicted RBP12□□□□□ -0.49
SHMT2-230ENST00000557427 MRNIPQ6NTE8 343 aa12□□□□□ -0.49
SHMT2-230ENST00000557427 CNSTQ6PJW8 725 aa12□□□□□ -0.49
SHMT2-230ENST00000557427 CEP97Q8IW35 865 aa12□□□□□ -0.49
SHMT2-230ENST00000557427 TMEM151AQ8N4L1 468 aa12□□□□□ -0.49
SHMT2-230ENST00000557427 GPATCH11Q8N954 259 aa12□□□□□ -0.49
SHMT2-230ENST00000557427 OR4L1Q8NH43 312 aa12□□□□□ -0.49
SHMT2-230ENST00000557427 HM13Q8TCT9 377 aa12□□□□□ -0.49
SHMT2-230ENST00000557427 KCTD4Q8WVF5 259 aa12□□□□□ -0.49
SHMT2-230ENST00000557427 SLC41A2Q96JW4 573 aa12□□□□□ -0.49
SHMT2-230ENST00000557427 GPR78Q96P69 363 aa12□□□□□ -0.49
SHMT2-230ENST00000557427 TMEM237Q96Q45 408 aa12□□□□□ -0.49
SHMT2-230ENST00000557427 SORT1Q99523 831 aa12□□□□□ -0.49
SHMT2-230ENST00000557427 LRMDAQ9H2I8 198 aa12□□□□□ -0.49
SHMT2-230ENST00000557427 ZNF395Q9H8N7 513 aaPredicted RBP12□□□□□ -0.49
SHMT2-230ENST00000557427 COG4Q9H9E3 785 aa12□□□□□ -0.49
SHMT2-230ENST00000557427 AGPAT4Q9NRZ5 378 aa12□□□□□ -0.49
SHMT2-230ENST00000557427 SEMA5BQ9P283 1151 aa12□□□□□ -0.49
SHMT2-230ENST00000557427 SNX7Q9UNH6 387 aa12□□□□□ -0.49
SHMT2-230ENST00000557427 IGLV3-16A0A075B6K0 115 aa11.99□□□□□ -0.49
SHMT2-230ENST00000557427 A0A1B0GUH1 482 aa11.99□□□□□ -0.49
SHMT2-230ENST00000557427 OR6C74A6NCV1 312 aa11.99□□□□□ -0.49
SHMT2-230ENST00000557427 MASP2O00187 686 aa11.99□□□□□ -0.49
SHMT2-230ENST00000557427 IFRD1O00458 451 aaPredicted RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms