RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 IL32P24001 234 aa8.61□□□□□ -1.03
SYNE3-205ENST00000557275 TMEM164Q5U3C3 297 aa8.61□□□□□ -1.03
SYNE3-205ENST00000557275 ALDH16A1Q8IZ83 802 aa8.61□□□□□ -1.03
SYNE3-205ENST00000557275 MTMR8Q96EF0 704 aa8.61□□□□□ -1.03
SYNE3-205ENST00000557275 RTFDC1Q9BY42 306 aaPredicted RBP8.61□□□□□ -1.03
SYNE3-205ENST00000557275 PRELID3BQ9Y3B1 194 aa8.61□□□□□ -1.03
SYNE3-205ENST00000557275 MEN1O00255 615 aa8.61□□□□□ -1.03
SYNE3-205ENST00000557275 RAB3BP20337 219 aa8.61□□□□□ -1.03
SYNE3-205ENST00000557275 MC4RP32245 332 aa8.61□□□□□ -1.03
SYNE3-205ENST00000557275 AFF3P51826 1226 aaKnown RBP8.61□□□□□ -1.03
SYNE3-205ENST00000557275 PEA15Q15121 130 aa8.61□□□□□ -1.03
SYNE3-205ENST00000557275 DPYSL2Q16555 572 aa8.61□□□□□ -1.03
SYNE3-205ENST00000557275 PRAMEF13Q5VWM6 474 aa8.61□□□□□ -1.03
SYNE3-205ENST00000557275 VASH1Q7L8A9 365 aaPredicted RBP8.61□□□□□ -1.03
SYNE3-205ENST00000557275 CNTNAP3BQ96NU0 1288 aa8.61□□□□□ -1.03
SYNE3-205ENST00000557275 GBA3Q9H227 469 aa8.61□□□□□ -1.03
SYNE3-205ENST00000557275 PTGES2Q9H7Z7 377 aa8.61□□□□□ -1.03
SYNE3-205ENST00000557275 CEP170Q5SW79 1584 aa8.61□□□□□ -1.03
SYNE3-205ENST00000557275 SETBP1Q9Y6X0 1596 aa8.61□□□□□ -1.03
SYNE3-205ENST00000557275 BEST1O76090 585 aa8.61□□□□□ -1.03
SYNE3-205ENST00000557275 PRKCGP05129 697 aa8.61□□□□□ -1.03
SYNE3-205ENST00000557275 CDK1P06493 297 aa8.61□□□□□ -1.03
SYNE3-205ENST00000557275 PTPN2P17706 415 aa8.61□□□□□ -1.03
SYNE3-205ENST00000557275 PTGER3P43115 390 aa8.61□□□□□ -1.03
SYNE3-205ENST00000557275 TOR1AIP1Q5JTV8 583 aa8.61□□□□□ -1.03
SYNE3-205ENST00000557275 NDUFAF5Q5TEU4 345 aa8.61□□□□□ -1.03
SYNE3-205ENST00000557275 LYSMD3Q7Z3D4 306 aa8.61□□□□□ -1.03
SYNE3-205ENST00000557275 SLC22A16Q86VW1 577 aa8.61□□□□□ -1.03
SYNE3-205ENST00000557275 OR1J4Q8NGS1 313 aa8.61□□□□□ -1.03
SYNE3-205ENST00000557275 SH2D3AQ9BRG2 576 aa8.61□□□□□ -1.03
SYNE3-205ENST00000557275 TLR4O00206 839 aa8.61□□□□□ -1.03
SYNE3-205ENST00000557275 RPIAP49247 311 aa8.61□□□□□ -1.03
SYNE3-205ENST00000557275 GINS1Q14691 196 aa8.61□□□□□ -1.03
SYNE3-205ENST00000557275 ZACNQ401N2 412 aa8.61□□□□□ -1.03
SYNE3-205ENST00000557275 C16orf59Q7L2K0 433 aa8.61□□□□□ -1.03
SYNE3-205ENST00000557275 NUDT13Q86X67 352 aa8.61□□□□□ -1.03
SYNE3-205ENST00000557275 CPA6Q8N4T0 437 aa8.61□□□□□ -1.03
SYNE3-205ENST00000557275 OR52J3Q8NH60 311 aa8.61□□□□□ -1.03
SYNE3-205ENST00000557275 TPT1P8Q9HAU6 139 aa8.61□□□□□ -1.03
SYNE3-205ENST00000557275 APMAPQ9HDC9 416 aa8.61□□□□□ -1.03
SYNE3-205ENST00000557275 MYO5BQ9ULV0 1848 aa8.61□□□□□ -1.03
SYNE3-205ENST00000557275 PRR5-ARHGAP8B1AHC4 643 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 SH3BGRLO75368 114 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 SBK2P0C263 348 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 ARHGAP8P85298 464 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 OGDHQ02218 1023 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 UAP1L1Q3KQV9 507 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 FAM71AQ8IYT1 594 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 NANPQ8TBE9 248 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 PLEKHO2Q8TD55 490 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 LRRC4CQ9HCJ2 640 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 ENAMQ9NRM1 1142 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 LUZP4Q9P127 313 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 BTRCQ9Y297 605 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 CACNA1EQ15878 2313 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 CCL15-CCL14A0A0B4J2E2 113 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 H3BRB1 525 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 SFTPBP07988 381 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 CPT2P23786 658 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 AQP1P29972 269 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 CCL15Q16663 113 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 ZNF674Q2M3X9 581 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 HES5Q5TA89 166 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 KIAA1614Q5VZ46 1190 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 LILRB2Q8N423 598 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 SLC16A10Q8TF71 515 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 GTPBP3Q969Y2 492 aaKnown RBP8.6□□□□□ -1.03
SYNE3-205ENST00000557275 HNRNPABQ99729 332 aaKnown RBP8.6□□□□□ -1.03
SYNE3-205ENST00000557275 CEP41Q9BYV8 373 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 TUT1Q9H6E5 874 aaKnown RBP8.6□□□□□ -1.03
SYNE3-205ENST00000557275 TMEM134Q9H6X4 195 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 CPNE5Q9HCH3 593 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 PPP1R14DQ9NXH3 145 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 ZIM2Q9NZV7 527 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 HPSEQ9Y251 543 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 LRRC72A6NJI9 287 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 GJB6O95452 261 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 AQP4P55087 323 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 DAG1Q14118 895 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 GFOD2Q3B7J2 385 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 GPR142Q7Z601 462 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 MMAAQ8IVH4 418 aaKnown RBP8.6□□□□□ -1.03
SYNE3-205ENST00000557275 OR2AP1Q8NGE2 309 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 STON2Q8WXE9 905 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 KLK14Q9P0G3 267 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 RNF6Q9Y252 685 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 LOC100130705A0A1B0GUX0 176 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 SC5DO75845 299 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 RFC3P40938 356 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 TBX2Q13207 712 aaPredicted RBP8.6□□□□□ -1.03
SYNE3-205ENST00000557275 ANKRD22Q5VYY1 191 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 FRZBQ92765 325 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 PATZ1Q9HBE1 687 aaKnown RBP8.6□□□□□ -1.03
SYNE3-205ENST00000557275 KCNIP1Q9NZI2 227 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 SLIT1O75093 1534 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 ZBTB7AO95365 584 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 SNAP29O95721 258 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 AP2A1O95782 977 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 SLC25A52Q3SY17 297 aa8.6□□□□□ -1.03
SYNE3-205ENST00000557275 METTL11BQ5VVY1 283 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms