RNA–Protein interactions for RNA: ENST00000557269.5

SHMT2-227, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-227ENST00000557269 RPS15AP62244 130 aaKnown RBP12.25□□□□□ -0.45
SHMT2-227ENST00000557269 CYP4F2P78329 520 aa12.25□□□□□ -0.45
SHMT2-227ENST00000557269 ACY1Q03154 408 aa12.25□□□□□ -0.45
SHMT2-227ENST00000557269 LCP2Q13094 533 aa12.25□□□□□ -0.45
SHMT2-227ENST00000557269 EIF3IQ13347 325 aaKnown RBP12.25□□□□□ -0.45
SHMT2-227ENST00000557269 CPSF6Q16630 551 aaKnown RBP eCLIP12.25□□□□□ -0.45
SHMT2-227ENST00000557269 HKDC1Q2TB90 917 aa12.25□□□□□ -0.45
SHMT2-227ENST00000557269 ARL13AQ5H913 290 aaPredicted RBP12.25□□□□□ -0.45
SHMT2-227ENST00000557269 CFAP157Q5JU67 520 aa12.25□□□□□ -0.45
SHMT2-227ENST00000557269 TCHHL1Q5QJ38 904 aaPredicted RBP12.25□□□□□ -0.45
SHMT2-227ENST00000557269 WASHC2DQ5SRD0 308 aa12.25□□□□□ -0.45
SHMT2-227ENST00000557269 LIPJQ5W064 366 aa12.25□□□□□ -0.45
SHMT2-227ENST00000557269 PWWP2BQ6NUJ5 590 aa12.25□□□□□ -0.45
SHMT2-227ENST00000557269 TMIGD1Q6UXZ0 262 aa12.25□□□□□ -0.45
SHMT2-227ENST00000557269 GPRIN3Q6ZVF9 776 aa12.25□□□□□ -0.45
SHMT2-227ENST00000557269 MILR1Q7Z6M3 343 aa12.25□□□□□ -0.45
SHMT2-227ENST00000557269 MYLK4Q86YV6 388 aaPredicted RBP12.25□□□□□ -0.45
SHMT2-227ENST00000557269 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.25□□□□□ -0.45
SHMT2-227ENST00000557269 RNF175Q8N4F7 328 aa12.25□□□□□ -0.45
SHMT2-227ENST00000557269 AGAP11Q8TF27 550 aa12.25□□□□□ -0.45
SHMT2-227ENST00000557269 USP7Q93009 1102 aa12.25□□□□□ -0.45
SHMT2-227ENST00000557269 TM4SF19Q96DZ7 209 aa12.25□□□□□ -0.45
SHMT2-227ENST00000557269 CNDP1Q96KN2 507 aa12.25□□□□□ -0.45
SHMT2-227ENST00000557269 KCNA7Q96RP8 456 aa12.25□□□□□ -0.45
SHMT2-227ENST00000557269 ZNF382Q96SR6 550 aa12.25□□□□□ -0.45
SHMT2-227ENST00000557269 EFCAB11Q9BUY7 163 aa12.25□□□□□ -0.45
SHMT2-227ENST00000557269 C20orf27Q9GZN8 174 aa12.25□□□□□ -0.45
SHMT2-227ENST00000557269 NT5DC2Q9H857 520 aa12.25□□□□□ -0.45
SHMT2-227ENST00000557269 POLR1BQ9H9Y6 1135 aa12.25□□□□□ -0.45
SHMT2-227ENST00000557269 MID1IP1Q9NPA3 183 aa12.25□□□□□ -0.45
SHMT2-227ENST00000557269 MED4Q9NPJ6 270 aa12.25□□□□□ -0.45
SHMT2-227ENST00000557269 FOXJ2Q9P0K8 574 aa12.25□□□□□ -0.45
SHMT2-227ENST00000557269 B3GALT1Q9Y5Z6 326 aa12.25□□□□□ -0.45
SHMT2-227ENST00000557269 MED19A0JLT2 244 aaPredicted RBP12.24□□□□□ -0.45
SHMT2-227ENST00000557269 FFAR3O14843 346 aa12.24□□□□□ -0.45
SHMT2-227ENST00000557269 POLR1CO15160 346 aaPredicted RBP12.24□□□□□ -0.45
SHMT2-227ENST00000557269 GPR42O15529 346 aa12.24□□□□□ -0.45
SHMT2-227ENST00000557269 NPHS1O60500 1241 aa12.24□□□□□ -0.45
SHMT2-227ENST00000557269 SRPX2O60687 465 aaPredicted RBP12.24□□□□□ -0.45
SHMT2-227ENST00000557269 LYPLA1O75608 230 aaPredicted RBP12.24□□□□□ -0.45
SHMT2-227ENST00000557269 OR2B3O76000 313 aa12.24□□□□□ -0.45
SHMT2-227ENST00000557269 MLYCDO95822 493 aa12.24□□□□□ -0.45
SHMT2-227ENST00000557269 SERPINE1P05121 402 aa12.24□□□□□ -0.45
SHMT2-227ENST00000557269 NR1D1P20393 614 aa12.24□□□□□ -0.45
SHMT2-227ENST00000557269 GRK3P35626 688 aa12.24□□□□□ -0.45
SHMT2-227ENST00000557269 ARL1P40616 181 aaPredicted RBP12.24□□□□□ -0.45
SHMT2-227ENST00000557269 GCGRP47871 477 aa12.24□□□□□ -0.45
SHMT2-227ENST00000557269 ATP1A2P50993 1020 aa12.24□□□□□ -0.45
SHMT2-227ENST00000557269 NEK2P51955 445 aa12.24□□□□□ -0.45
SHMT2-227ENST00000557269 HYAL2Q12891 473 aa12.24□□□□□ -0.45
SHMT2-227ENST00000557269 IL11RAQ14626 422 aa12.24□□□□□ -0.45
SHMT2-227ENST00000557269 ZRSR2Q15696 482 aaKnown RBP12.24□□□□□ -0.45
SHMT2-227ENST00000557269 PRTGQ2VWP7 1150 aa12.24□□□□□ -0.45
SHMT2-227ENST00000557269 HSP90B2PQ58FF3 399 aa12.24□□□□□ -0.45
SHMT2-227ENST00000557269 LAS2Q8IYD9 372 aa12.24□□□□□ -0.45
SHMT2-227ENST00000557269 KRT78Q8N1N4 520 aa12.24□□□□□ -0.45
SHMT2-227ENST00000557269 DTWD1Q8N5C7 304 aa12.24□□□□□ -0.45
SHMT2-227ENST00000557269 ZNF655Q8N720 491 aaPredicted RBP12.24□□□□□ -0.45
SHMT2-227ENST00000557269 CSNK1A1LQ8N752 337 aa12.24□□□□□ -0.45
SHMT2-227ENST00000557269 CDYL2Q8N8U2 506 aa12.24□□□□□ -0.45
SHMT2-227ENST00000557269 SLC38A9Q8NBW4 561 aa12.24□□□□□ -0.45
SHMT2-227ENST00000557269 OR7G3Q8NG95 312 aa12.24□□□□□ -0.45
SHMT2-227ENST00000557269 CREB3L4Q8TEY5 395 aa12.24□□□□□ -0.45
SHMT2-227ENST00000557269 SLC46A1Q96NT5 459 aa12.24□□□□□ -0.45
SHMT2-227ENST00000557269 TAAR9Q96RI9 348 aa12.24□□□□□ -0.45
SHMT2-227ENST00000557269 AICDAQ9GZX7 198 aa12.24□□□□□ -0.45
SHMT2-227ENST00000557269 DRC3Q9H069 523 aa12.24□□□□□ -0.45
SHMT2-227ENST00000557269 FARSBQ9NSD9 589 aaKnown RBP12.24□□□□□ -0.45
SHMT2-227ENST00000557269 SERTAD3Q9UJW9 196 aa12.24□□□□□ -0.45
SHMT2-227ENST00000557269 RARRES3Q9UL19 164 aa12.24□□□□□ -0.45
SHMT2-227ENST00000557269 MRPS2Q9Y399 296 aaKnown RBP12.24□□□□□ -0.45
SHMT2-227ENST00000557269 NEUROG3Q9Y4Z2 214 aa12.24□□□□□ -0.45
SHMT2-227ENST00000557269 TIMM22Q9Y584 194 aa12.24□□□□□ -0.45
SHMT2-227ENST00000557269 PCDHGA8Q9Y5G5 932 aa12.24□□□□□ -0.45
SHMT2-227ENST00000557269 AP1M2Q9Y6Q5 423 aa12.24□□□□□ -0.45
SHMT2-227ENST00000557269 FITM1A5D6W6 292 aa12.23□□□□□ -0.45
SHMT2-227ENST00000557269 H0YIV9 168 aa12.23□□□□□ -0.45
SHMT2-227ENST00000557269 UGDHO60701 494 aa12.23□□□□□ -0.45
SHMT2-227ENST00000557269 ESRRBO95718 433 aa12.23□□□□□ -0.45
SHMT2-227ENST00000557269 CAPN1P07384 714 aa12.23□□□□□ -0.45
SHMT2-227ENST00000557269 PCNAP12004 261 aa12.23□□□□□ -0.45
SHMT2-227ENST00000557269 CXCR2P25025 360 aa12.23□□□□□ -0.45
SHMT2-227ENST00000557269 HNF4AP41235 474 aa12.23□□□□□ -0.45
SHMT2-227ENST00000557269 ITGA1P56199 1179 aa12.23□□□□□ -0.45
SHMT2-227ENST00000557269 BST1Q10588 318 aa12.23□□□□□ -0.45
SHMT2-227ENST00000557269 ASPHQ12797 758 aa12.23□□□□□ -0.45
SHMT2-227ENST00000557269 LAPTM5Q13571 262 aa12.23□□□□□ -0.45
SHMT2-227ENST00000557269 RCN2Q14257 317 aa12.23□□□□□ -0.45
SHMT2-227ENST00000557269 RTP5Q14D33 572 aa12.23□□□□□ -0.45
SHMT2-227ENST00000557269 GGTA1PQ4G0N0 100 aa12.23□□□□□ -0.45
SHMT2-227ENST00000557269 SGO1Q5FBB7 561 aa12.23□□□□□ -0.45
SHMT2-227ENST00000557269 PAGE2BQ5JRK9 111 aa12.23□□□□□ -0.45
SHMT2-227ENST00000557269 DCAF12Q5T6F0 453 aa12.23□□□□□ -0.45
SHMT2-227ENST00000557269 MED27Q6P2C8 311 aa12.23□□□□□ -0.45
SHMT2-227ENST00000557269 ASPGQ86U10 573 aa12.23□□□□□ -0.45
SHMT2-227ENST00000557269 CUZD1Q86UP6 607 aa12.23□□□□□ -0.45
SHMT2-227ENST00000557269 PPP1R3BQ86XI6 285 aa12.23□□□□□ -0.45
SHMT2-227ENST00000557269 ARHGEF39Q8N4T4 335 aa12.23□□□□□ -0.45
SHMT2-227ENST00000557269 KCT2Q8NC54 265 aa12.23□□□□□ -0.45
SHMT2-227ENST00000557269 PPP1R14CQ8TAE6 165 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms