RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 P2RX6O15547 441 aa11.21□□□□□ -0.61
ACTN1-221ENST00000556571 NSA2O95478 260 aaKnown RBP11.21□□□□□ -0.61
ACTN1-221ENST00000556571 SP1P08047 785 aa11.21□□□□□ -0.61
ACTN1-221ENST00000556571 EIF3BP55884 814 aaKnown RBP11.21□□□□□ -0.61
ACTN1-221ENST00000556571 OC90Q02509 493 aaPredicted RBP11.21□□□□□ -0.61
ACTN1-221ENST00000556571 GBX1Q14549 363 aa11.21□□□□□ -0.61
ACTN1-221ENST00000556571 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.21□□□□□ -0.61
ACTN1-221ENST00000556571 CTSL3PQ5NE16 218 aa11.21□□□□□ -0.61
ACTN1-221ENST00000556571 SLC25A25Q6KCM7 469 aa11.21□□□□□ -0.61
ACTN1-221ENST00000556571 NCCRP1Q6ZVX7 275 aaPredicted RBP11.21□□□□□ -0.61
ACTN1-221ENST00000556571 GALNTL5Q7Z4T8 443 aa11.21□□□□□ -0.61
ACTN1-221ENST00000556571 ADCK2Q7Z695 626 aa11.21□□□□□ -0.61
ACTN1-221ENST00000556571 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.21□□□□□ -0.61
ACTN1-221ENST00000556571 ANKRD37Q7Z713 158 aa11.21□□□□□ -0.61
ACTN1-221ENST00000556571 SDCCAG8Q86SQ7 713 aaPredicted RBP11.21□□□□□ -0.61
ACTN1-221ENST00000556571 TMEM139Q8IV31 216 aa11.21□□□□□ -0.61
ACTN1-221ENST00000556571 LGI4Q8N135 537 aa11.21□□□□□ -0.61
ACTN1-221ENST00000556571 SLC5A8Q8N695 610 aa11.21□□□□□ -0.61
ACTN1-221ENST00000556571 LRRC57Q8N9N7 239 aa11.21□□□□□ -0.61
ACTN1-221ENST00000556571 OR9A4Q8NGU2 314 aa11.21□□□□□ -0.61
ACTN1-221ENST00000556571 OR51Q1Q8NH59 317 aa11.21□□□□□ -0.61
ACTN1-221ENST00000556571 SDCCAG3Q96C92 435 aa11.21□□□□□ -0.61
ACTN1-221ENST00000556571 BIRC8Q96P09 236 aa11.21□□□□□ -0.61
ACTN1-221ENST00000556571 EBNA1BP2Q99848 306 aaKnown RBP11.21□□□□□ -0.61
ACTN1-221ENST00000556571 TSGA10Q9BZW7 698 aa11.21□□□□□ -0.61
ACTN1-221ENST00000556571 LACRTQ9GZZ8 138 aa11.21□□□□□ -0.61
ACTN1-221ENST00000556571 GRPEL1Q9HAV7 217 aa11.21□□□□□ -0.61
ACTN1-221ENST00000556571 MMP25Q9NPA2 562 aa11.21□□□□□ -0.61
ACTN1-221ENST00000556571 AMFRQ9UKV5 643 aa11.21□□□□□ -0.61
ACTN1-221ENST00000556571 PPT2Q9UMR5 302 aa11.21□□□□□ -0.61
ACTN1-221ENST00000556571 GABRR3A8MPY1 467 aa11.2□□□□□ -0.62
ACTN1-221ENST00000556571 MIF4GDA9UHW6 222 aaKnown RBP11.2□□□□□ -0.62
ACTN1-221ENST00000556571 ADAM10O14672 748 aa11.2□□□□□ -0.62
ACTN1-221ENST00000556571 PFDN6O15212 129 aa11.2□□□□□ -0.62
ACTN1-221ENST00000556571 PSIP1O75475 530 aaKnown RBP11.2□□□□□ -0.62
ACTN1-221ENST00000556571 IFNB1P01574 187 aa11.2□□□□□ -0.62
ACTN1-221ENST00000556571 CATP04040 527 aaKnown RBP11.2□□□□□ -0.62
ACTN1-221ENST00000556571 FMO4P31512 558 aa11.2□□□□□ -0.62
ACTN1-221ENST00000556571 XCR1P46094 333 aa11.2□□□□□ -0.62
ACTN1-221ENST00000556571 PNLIPRP1P54315 467 aa11.2□□□□□ -0.62
ACTN1-221ENST00000556571 TAS2R50P59544 299 aa11.2□□□□□ -0.62
ACTN1-221ENST00000556571 PEX26Q7Z412 305 aa11.2□□□□□ -0.62
ACTN1-221ENST00000556571 PCGF5Q86SE9 256 aa11.2□□□□□ -0.62
ACTN1-221ENST00000556571 CHERPQ8IWX8 916 aaKnown RBP11.2□□□□□ -0.62
ACTN1-221ENST00000556571 PKP4Q99569 1192 aa11.2□□□□□ -0.62
ACTN1-221ENST00000556571 NPAS2Q99743 824 aa11.2□□□□□ -0.62
ACTN1-221ENST00000556571 RAB6BQ9NRW1 208 aa11.2□□□□□ -0.62
ACTN1-221ENST00000556571 TREX1Q9NSU2 369 aa11.2□□□□□ -0.62
ACTN1-221ENST00000556571 LRFN1Q9P244 771 aa11.2□□□□□ -0.62
ACTN1-221ENST00000556571 TSR3Q9UJK0 312 aaKnown RBP11.2□□□□□ -0.62
ACTN1-221ENST00000556571 ASB1Q9Y576 335 aa11.2□□□□□ -0.62
ACTN1-221ENST00000556571 HEATR5BQ9P2D3 2071 aa11.2□□□□□ -0.62
ACTN1-221ENST00000556571 KCNE1BA0A087WTH5 132 aa11.19□□□□□ -0.62
ACTN1-221ENST00000556571 TCRBV7S2A1N4TA0A589 114 aa11.19□□□□□ -0.62
ACTN1-221ENST00000556571 GRID2IPA4D2P6 1211 aa11.19□□□□□ -0.62
ACTN1-221ENST00000556571 FOXO6A8MYZ6 492 aa11.19□□□□□ -0.62
ACTN1-221ENST00000556571 E7ENX8 843 aa11.19□□□□□ -0.62
ACTN1-221ENST00000556571 SMAPO00193 183 aa11.19□□□□□ -0.62
ACTN1-221ENST00000556571 HAT1O14929 419 aa11.19□□□□□ -0.62
ACTN1-221ENST00000556571 MAN1A2O60476 641 aa11.19□□□□□ -0.62
ACTN1-221ENST00000556571 DIAPH2O60879 1101 aa11.19□□□□□ -0.62
ACTN1-221ENST00000556571 NIPSNAP2O75323 286 aa11.19□□□□□ -0.62
ACTN1-221ENST00000556571 NEURL1O76050 574 aa11.19□□□□□ -0.62
ACTN1-221ENST00000556571 SLC16A8O95907 504 aa11.19□□□□□ -0.62
ACTN1-221ENST00000556571 ESR1P03372 595 aa11.19□□□□□ -0.62
ACTN1-221ENST00000556571 APRTP07741 180 aa11.19□□□□□ -0.62
ACTN1-221ENST00000556571 ZNF24P17028 368 aa11.19□□□□□ -0.62
ACTN1-221ENST00000556571 CHRM3P20309 590 aa11.19□□□□□ -0.62
ACTN1-221ENST00000556571 HRH2P25021 359 aa11.19□□□□□ -0.62
ACTN1-221ENST00000556571 BCL6P41182 706 aa11.19□□□□□ -0.62
ACTN1-221ENST00000556571 ADARP55265 1226 aaKnown RBP11.19□□□□□ -0.62
ACTN1-221ENST00000556571 HSF1Q00613 529 aa11.19□□□□□ -0.62
ACTN1-221ENST00000556571 TAP2Q03519 686 aa11.19□□□□□ -0.62
ACTN1-221ENST00000556571 ACTN3Q08043 901 aaPredicted RBP11.19□□□□□ -0.62
ACTN1-221ENST00000556571 NSDHLQ15738 373 aa11.19□□□□□ -0.62
ACTN1-221ENST00000556571 MAPKAPK3Q16644 382 aa11.19□□□□□ -0.62
ACTN1-221ENST00000556571 KLHL38Q2WGJ6 581 aa11.19□□□□□ -0.62
ACTN1-221ENST00000556571 RNF187Q5TA31 235 aaPredicted RBP11.19□□□□□ -0.62
ACTN1-221ENST00000556571 MRNIPQ6NTE8 343 aa11.19□□□□□ -0.62
ACTN1-221ENST00000556571 PAPD4Q6PIY7 484 aaKnown RBP11.19□□□□□ -0.62
ACTN1-221ENST00000556571 C3P1Q6ZMU1 363 aa11.19□□□□□ -0.62
ACTN1-221ENST00000556571 PLD3Q8IV08 490 aa11.19□□□□□ -0.62
ACTN1-221ENST00000556571 OTUD6BQ8N6M0 293 aa11.19□□□□□ -0.62
ACTN1-221ENST00000556571 PLPP5Q8NEB5 264 aa11.19□□□□□ -0.62
ACTN1-221ENST00000556571 ZNF480Q8WV37 535 aa11.19□□□□□ -0.62
ACTN1-221ENST00000556571 ATG4AQ8WYN0 398 aa11.19□□□□□ -0.62
ACTN1-221ENST00000556571 LPGAT1Q92604 370 aa11.19□□□□□ -0.62
ACTN1-221ENST00000556571 TCF12Q99081 682 aa11.19□□□□□ -0.62
ACTN1-221ENST00000556571 LPAR4Q99677 370 aa11.19□□□□□ -0.62
ACTN1-221ENST00000556571 OLFM1Q99784 485 aa11.19□□□□□ -0.62
ACTN1-221ENST00000556571 FRMD8P1Q9BZ68 369 aaPredicted RBP11.19□□□□□ -0.62
ACTN1-221ENST00000556571 IL22Q9GZX6 179 aa11.19□□□□□ -0.62
ACTN1-221ENST00000556571 HCN3Q9P1Z3 774 aa11.19□□□□□ -0.62
ACTN1-221ENST00000556571 ABCA4P78363 2273 aa11.19□□□□□ -0.62
ACTN1-221ENST00000556571 MAP1AP78559 2803 aaPredicted RBP11.18□□□□□ -0.62
ACTN1-221ENST00000556571 OR2W5A6NFC9 320 aa11.18□□□□□ -0.62
ACTN1-221ENST00000556571 H7BY64 318 aa11.18□□□□□ -0.62
ACTN1-221ENST00000556571 AP3B1O00203 1094 aa11.18□□□□□ -0.62
ACTN1-221ENST00000556571 NDC80O14777 642 aa11.18□□□□□ -0.62
ACTN1-221ENST00000556571 ZNHIT1O43257 154 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms