RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 MRNIPQ6NTE8 343 aa4.94□□□□□ -1.62
TMEM260-210ENST00000556422 SLC25A24Q6NUK1 477 aa4.94□□□□□ -1.62
TMEM260-210ENST00000556422 NCEH1Q6PIU2 408 aa4.94□□□□□ -1.62
TMEM260-210ENST00000556422 LRRC74BQ6ZQY2 392 aa4.94□□□□□ -1.62
TMEM260-210ENST00000556422 ZNF551Q7Z340 670 aaPredicted RBP4.94□□□□□ -1.62
TMEM260-210ENST00000556422 RABEPKQ7Z6M1 372 aa4.94□□□□□ -1.62
TMEM260-210ENST00000556422 ARL14EPQ8N8R7 260 aaPredicted RBP4.94□□□□□ -1.62
TMEM260-210ENST00000556422 AKR7LQ8NHP1 331 aa4.94□□□□□ -1.62
TMEM260-210ENST00000556422 SIPA1Q96FS4 1042 aa4.94□□□□□ -1.62
TMEM260-210ENST00000556422 C5orf34Q96MH7 638 aa4.94□□□□□ -1.62
TMEM260-210ENST00000556422 RIPOR3Q96MK2 946 aa4.94□□□□□ -1.62
TMEM260-210ENST00000556422 ZNF558Q96NG5 402 aa4.94□□□□□ -1.62
TMEM260-210ENST00000556422 PRRX2Q99811 253 aa4.94□□□□□ -1.62
TMEM260-210ENST00000556422 LRRC3Q9BY71 257 aa4.94□□□□□ -1.62
TMEM260-210ENST00000556422 NARFLQ9H6Q4 476 aa4.94□□□□□ -1.62
TMEM260-210ENST00000556422 POPDC3Q9HBV1 291 aa4.94□□□□□ -1.62
TMEM260-210ENST00000556422 SCUBE2Q9NQ36 999 aa4.94□□□□□ -1.62
TMEM260-210ENST00000556422 ADPRHL2Q9NX46 363 aa4.94□□□□□ -1.62
TMEM260-210ENST00000556422 CFAP97Q9P2B7 532 aa4.94□□□□□ -1.62
TMEM260-210ENST00000556422 GAB2Q9UQC2 676 aa4.94□□□□□ -1.62
TMEM260-210ENST00000556422 POMPQ9Y244 141 aa4.94□□□□□ -1.62
TMEM260-210ENST00000556422 FCF1Q9Y324 198 aaKnown RBP4.94□□□□□ -1.62
TMEM260-210ENST00000556422 SLC22A2O15244 555 aa4.94□□□□□ -1.62
TMEM260-210ENST00000556422 OR1I1O60431 355 aa4.94□□□□□ -1.62
TMEM260-210ENST00000556422 TBL1XO60907 577 aa4.94□□□□□ -1.62
TMEM260-210ENST00000556422 ZNF821O75541 412 aaPredicted RBP4.94□□□□□ -1.62
TMEM260-210ENST00000556422 MYO1DO94832 1006 aa4.94□□□□□ -1.62
TMEM260-210ENST00000556422 HTR3BO95264 441 aa4.94□□□□□ -1.62
TMEM260-210ENST00000556422 PROS1P07225 676 aa4.94□□□□□ -1.62
TMEM260-210ENST00000556422 MBL2P11226 248 aaPredicted RBP4.94□□□□□ -1.62
TMEM260-210ENST00000556422 HK1P19367 917 aa4.94□□□□□ -1.62
TMEM260-210ENST00000556422 SLC7A1P30825 629 aa4.94□□□□□ -1.62
TMEM260-210ENST00000556422 FOXA1P55317 472 aa4.94□□□□□ -1.62
TMEM260-210ENST00000556422 SCAND1P57086 179 aa4.94□□□□□ -1.62
TMEM260-210ENST00000556422 HERVK_113P63132 956 aa4.94□□□□□ -1.62
TMEM260-210ENST00000556422 SH3BP2P78314 561 aa4.94□□□□□ -1.62
TMEM260-210ENST00000556422 SEC23BQ15437 767 aa4.94□□□□□ -1.62
TMEM260-210ENST00000556422 LRRC36Q1X8D7 754 aa4.94□□□□□ -1.62
TMEM260-210ENST00000556422 FNDC3BQ53EP0 1204 aaKnown RBP4.94□□□□□ -1.62
TMEM260-210ENST00000556422 CMPK2Q5EBM0 449 aa4.94□□□□□ -1.62
TMEM260-210ENST00000556422 PAGE2BQ5JRK9 111 aa4.94□□□□□ -1.62
TMEM260-210ENST00000556422 TCHHL1Q5QJ38 904 aaPredicted RBP4.94□□□□□ -1.62
TMEM260-210ENST00000556422 PAOXQ6QHF9 649 aa4.94□□□□□ -1.62
TMEM260-210ENST00000556422 PAQR3Q6TCH7 311 aa4.94□□□□□ -1.62
TMEM260-210ENST00000556422 THAP5Q7Z6K1 395 aa4.94□□□□□ -1.62
TMEM260-210ENST00000556422 ADAMTSL2Q86TH1 951 aa4.94□□□□□ -1.62
TMEM260-210ENST00000556422 DDX53Q86TM3 631 aaKnown RBP4.94□□□□□ -1.62
TMEM260-210ENST00000556422 HORMAD1Q86X24 394 aa4.94□□□□□ -1.62
TMEM260-210ENST00000556422 FBXL6Q8N531 539 aa4.94□□□□□ -1.62
TMEM260-210ENST00000556422 ASCC1Q8N9N2 400 aaKnown RBP4.94□□□□□ -1.62
TMEM260-210ENST00000556422 RHEBL1Q8TAI7 183 aa4.94□□□□□ -1.62
TMEM260-210ENST00000556422 CCDC124Q96CT7 223 aaKnown RBP4.94□□□□□ -1.62
TMEM260-210ENST00000556422 CCDC126Q96EE4 140 aa4.94□□□□□ -1.62
TMEM260-210ENST00000556422 LINGO1Q96FE5 620 aa4.94□□□□□ -1.62
TMEM260-210ENST00000556422 C3orf30Q96M34 536 aa4.94□□□□□ -1.62
TMEM260-210ENST00000556422 NSUN5Q96P11 429 aaKnown RBP4.94□□□□□ -1.62
TMEM260-210ENST00000556422 ERVK-6Q9BXR3 956 aa4.94□□□□□ -1.62
TMEM260-210ENST00000556422 GTSE1Q9NYZ3 720 aa4.94□□□□□ -1.62
TMEM260-210ENST00000556422 SUCOQ9UBS9 1254 aaKnown RBP4.94□□□□□ -1.62
TMEM260-210ENST00000556422 FKBPLQ9UIM3 349 aa4.94□□□□□ -1.62
TMEM260-210ENST00000556422 PACSIN3Q9UKS6 424 aa4.94□□□□□ -1.62
TMEM260-210ENST00000556422 USP34Q70CQ2 3546 aa4.94□□□□□ -1.62
TMEM260-210ENST00000556422 ATG2AQ2TAZ0 1938 aa4.94□□□□□ -1.62
TMEM260-210ENST00000556422 GAPDHSO14556 408 aaPredicted RBP4.94□□□□□ -1.62
TMEM260-210ENST00000556422 PRRG1O14668 218 aa4.94□□□□□ -1.62
TMEM260-210ENST00000556422 TRMUO75648 421 aaKnown RBP4.94□□□□□ -1.62
TMEM260-210ENST00000556422 CIB2O75838 187 aa4.94□□□□□ -1.62
TMEM260-210ENST00000556422 CSKP41240 450 aa4.94□□□□□ -1.62
TMEM260-210ENST00000556422 NUDT2P50583 147 aa4.94□□□□□ -1.62
TMEM260-210ENST00000556422 CDH13P55290 713 aa4.94□□□□□ -1.62
TMEM260-210ENST00000556422 PMS2P3Q13401 168 aa4.94□□□□□ -1.62
TMEM260-210ENST00000556422 PCGF3Q3KNV8 242 aa4.94□□□□□ -1.62
TMEM260-210ENST00000556422 MANEAQ5SRI9 462 aa4.94□□□□□ -1.62
TMEM260-210ENST00000556422 ATXN7L2Q5T6C5 722 aaPredicted RBP4.94□□□□□ -1.62
TMEM260-210ENST00000556422 LCN1P1Q5VSP4 162 aa4.94□□□□□ -1.62
TMEM260-210ENST00000556422 LIPNQ5VXI9 398 aa4.94□□□□□ -1.62
TMEM260-210ENST00000556422 AFTPHQ6ULP2 937 aa4.94□□□□□ -1.62
TMEM260-210ENST00000556422 ZNF783Q6ZMS7 281 aa4.94□□□□□ -1.62
TMEM260-210ENST00000556422 RBM44Q6ZP01 1051 aaKnown RBP4.94□□□□□ -1.62
TMEM260-210ENST00000556422 ACAD11Q709F0 780 aa4.94□□□□□ -1.62
TMEM260-210ENST00000556422 LARP4Q71RC2 724 aaKnown RBP eCLIP4.94□□□□□ -1.62
TMEM260-210ENST00000556422 DSELQ8IZU8 1212 aa4.94□□□□□ -1.62
TMEM260-210ENST00000556422 APCDD1Q8J025 514 aa4.94□□□□□ -1.62
TMEM260-210ENST00000556422 FBXW8Q8N3Y1 598 aa4.94□□□□□ -1.62
TMEM260-210ENST00000556422 RP9Q8TA86 221 aaKnown RBP4.94□□□□□ -1.62
TMEM260-210ENST00000556422 PRR7Q8TB68 274 aa4.94□□□□□ -1.62
TMEM260-210ENST00000556422 GDPD5Q8WTR4 605 aa4.94□□□□□ -1.62
TMEM260-210ENST00000556422 PYDC1Q8WXC3 89 aa4.94□□□□□ -1.62
TMEM260-210ENST00000556422 BORCS5Q969J3 196 aa4.94□□□□□ -1.62
TMEM260-210ENST00000556422 RCN3Q96D15 328 aa4.94□□□□□ -1.62
TMEM260-210ENST00000556422 MTERF3Q96E29 417 aa4.94□□□□□ -1.62
TMEM260-210ENST00000556422 PELOQ9BRX2 385 aaKnown RBP4.94□□□□□ -1.62
TMEM260-210ENST00000556422 SLC22A4Q9H015 551 aa4.94□□□□□ -1.62
TMEM260-210ENST00000556422 SNTG1Q9NSN8 517 aa4.94□□□□□ -1.62
TMEM260-210ENST00000556422 SACM1LQ9NTJ5 587 aa4.94□□□□□ -1.62
TMEM260-210ENST00000556422 MAT2BQ9NZL9 334 aa4.94□□□□□ -1.62
TMEM260-210ENST00000556422 FIS1Q9Y3D6 152 aa4.94□□□□□ -1.62
TMEM260-210ENST00000556422 DNAJC15Q9Y5T4 150 aa4.94□□□□□ -1.62
TMEM260-210ENST00000556422 PTGDR2Q9Y5Y4 395 aa4.94□□□□□ -1.62
TMEM260-210ENST00000556422 CPQQ9Y646 472 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms