RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 INHBCP55103 352 aa10.58□□□□□ -0.72
TMEM260-208ENST00000555905 GFERP55789 205 aa10.58□□□□□ -0.72
TMEM260-208ENST00000555905 CCL7P80098 99 aa10.58□□□□□ -0.72
TMEM260-208ENST00000555905 RELAQ04206 551 aa10.58□□□□□ -0.72
TMEM260-208ENST00000555905 DDX39BQ13838 428 aaKnown RBP10.58□□□□□ -0.72
TMEM260-208ENST00000555905 CLPPQ16740 277 aaPredicted RBP10.58□□□□□ -0.72
TMEM260-208ENST00000555905 IMPG1Q17R60 797 aa10.58□□□□□ -0.72
TMEM260-208ENST00000555905 STPG1Q5TH74 334 aa10.58□□□□□ -0.72
TMEM260-208ENST00000555905 VWA5B1Q5TIE3 1220 aa10.58□□□□□ -0.72
TMEM260-208ENST00000555905 CACHD1Q5VU97 1274 aa10.58□□□□□ -0.72
TMEM260-208ENST00000555905 EPGNQ6UW88 154 aa10.58□□□□□ -0.72
TMEM260-208ENST00000555905 SCIMPQ6UWF3 145 aa10.58□□□□□ -0.72
TMEM260-208ENST00000555905 MAVSQ7Z434 540 aa10.58□□□□□ -0.72
TMEM260-208ENST00000555905 TRIM46Q7Z4K8 759 aa10.58□□□□□ -0.72
TMEM260-208ENST00000555905 PIGWQ7Z7B1 504 aa10.58□□□□□ -0.72
TMEM260-208ENST00000555905 GBP7Q8N8V2 638 aaPredicted RBP10.58□□□□□ -0.72
TMEM260-208ENST00000555905 C19orf47Q8N9M1 422 aaKnown RBP10.58□□□□□ -0.72
TMEM260-208ENST00000555905 ZNF740Q8NDX6 193 aa10.58□□□□□ -0.72
TMEM260-208ENST00000555905 HUS1BQ8NHY5 278 aa10.58□□□□□ -0.72
TMEM260-208ENST00000555905 BAHD1Q8TBE0 780 aaPredicted RBP10.58□□□□□ -0.72
TMEM260-208ENST00000555905 ZNF473Q8WTR7 871 aaKnown RBP10.58□□□□□ -0.72
TMEM260-208ENST00000555905 USP7Q93009 1102 aa10.58□□□□□ -0.72
TMEM260-208ENST00000555905 THAP11Q96EK4 314 aa10.58□□□□□ -0.72
TMEM260-208ENST00000555905 TCTN2Q96GX1 697 aa10.58□□□□□ -0.72
TMEM260-208ENST00000555905 PRR11Q96HE9 360 aaPredicted RBP10.58□□□□□ -0.72
TMEM260-208ENST00000555905 SEC16BQ96JE7 1060 aa10.58□□□□□ -0.72
TMEM260-208ENST00000555905 PPP1R36Q96LQ0 422 aa10.58□□□□□ -0.72
TMEM260-208ENST00000555905 RILPQ96NA2 401 aa10.58□□□□□ -0.72
TMEM260-208ENST00000555905 TRAPPC9Q96Q05 1148 aa10.58□□□□□ -0.72
TMEM260-208ENST00000555905 MTERF1Q99551 399 aaKnown RBP10.58□□□□□ -0.72
TMEM260-208ENST00000555905 MAP3K3Q99759 626 aa10.58□□□□□ -0.72
TMEM260-208ENST00000555905 TMEM120AQ9BXJ8 343 aa10.58□□□□□ -0.72
TMEM260-208ENST00000555905 SPNS1Q9H2V7 528 aa10.58□□□□□ -0.72
TMEM260-208ENST00000555905 RHBGQ9H310 441 aa10.58□□□□□ -0.72
TMEM260-208ENST00000555905 TUBB1Q9H4B7 451 aa10.58□□□□□ -0.72
TMEM260-208ENST00000555905 SYNDIG1Q9H7V2 258 aa10.58□□□□□ -0.72
TMEM260-208ENST00000555905 MEAF6Q9HAF1 191 aa10.58□□□□□ -0.72
TMEM260-208ENST00000555905 FARSBQ9NSD9 589 aaKnown RBP10.58□□□□□ -0.72
TMEM260-208ENST00000555905 TSC22D4Q9Y3Q8 395 aa10.58□□□□□ -0.72
TMEM260-208ENST00000555905 OTOGLQ3ZCN5 2332 aa10.58□□□□□ -0.72
TMEM260-208ENST00000555905 WDR87Q6ZQQ6 2873 aa10.58□□□□□ -0.72
TMEM260-208ENST00000555905 MN1Q10571 1320 aaPredicted RBP10.58□□□□□ -0.72
TMEM260-208ENST00000555905 RP1P56715 2156 aa10.58□□□□□ -0.72
TMEM260-208ENST00000555905 SERTM1A2A2V5 107 aa10.57□□□□□ -0.72
TMEM260-208ENST00000555905 FOXE1O00358 373 aaPredicted RBP10.57□□□□□ -0.72
TMEM260-208ENST00000555905 ZBTB11O95625 1053 aaPredicted RBP10.57□□□□□ -0.72
TMEM260-208ENST00000555905 C9P02748 559 aa10.57□□□□□ -0.72
TMEM260-208ENST00000555905 JUNP05412 331 aaKnown RBP10.57□□□□□ -0.72
TMEM260-208ENST00000555905 HSD3B1P14060 373 aa10.57□□□□□ -0.72
TMEM260-208ENST00000555905 ST6GAL1P15907 406 aa10.57□□□□□ -0.72
TMEM260-208ENST00000555905 HSD3B2P26439 372 aa10.57□□□□□ -0.72
TMEM260-208ENST00000555905 CSF2RBP32927 897 aa10.57□□□□□ -0.72
TMEM260-208ENST00000555905 AHRP35869 848 aa10.57□□□□□ -0.72
TMEM260-208ENST00000555905 BCL6P41182 706 aa10.57□□□□□ -0.72
TMEM260-208ENST00000555905 SCTRP47872 440 aa10.57□□□□□ -0.72
TMEM260-208ENST00000555905 ARL4DP49703 201 aa10.57□□□□□ -0.72
TMEM260-208ENST00000555905 HTR6P50406 440 aa10.57□□□□□ -0.72
TMEM260-208ENST00000555905 CYP4F3Q08477 520 aa10.57□□□□□ -0.72
TMEM260-208ENST00000555905 CSTF3Q12996 717 aaKnown RBP10.57□□□□□ -0.72
TMEM260-208ENST00000555905 SLC9B1Q4ZJI4 515 aa10.57□□□□□ -0.72
TMEM260-208ENST00000555905 SNAP47Q5SQN1 464 aa10.57□□□□□ -0.72
TMEM260-208ENST00000555905 NXNQ6DKJ4 435 aa10.57□□□□□ -0.72
TMEM260-208ENST00000555905 FCRL6Q6DN72 434 aa10.57□□□□□ -0.72
TMEM260-208ENST00000555905 TMEM71Q6P5X7 295 aa10.57□□□□□ -0.72
TMEM260-208ENST00000555905 PRSS42Q7Z5A4 293 aa10.57□□□□□ -0.72
TMEM260-208ENST00000555905 PLD3Q8IV08 490 aa10.57□□□□□ -0.72
TMEM260-208ENST00000555905 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.57□□□□□ -0.72
TMEM260-208ENST00000555905 ANKS4BQ8N8V4 417 aa10.57□□□□□ -0.72
TMEM260-208ENST00000555905 MFSD9Q8NBP5 474 aa10.57□□□□□ -0.72
TMEM260-208ENST00000555905 WDR48Q8TAF3 677 aa10.57□□□□□ -0.72
TMEM260-208ENST00000555905 WDR20Q8TBZ3 569 aa10.57□□□□□ -0.72
TMEM260-208ENST00000555905 ACTRT2Q8TDY3 377 aa10.57□□□□□ -0.72
TMEM260-208ENST00000555905 STON2Q8WXE9 905 aa10.57□□□□□ -0.72
TMEM260-208ENST00000555905 RERGQ96A58 199 aaPredicted RBP10.57□□□□□ -0.72
TMEM260-208ENST00000555905 TUBGCP3Q96CW5 907 aa10.57□□□□□ -0.72
TMEM260-208ENST00000555905 PPM1MQ96MI6 270 aa10.57□□□□□ -0.72
TMEM260-208ENST00000555905 GFM1Q96RP9 751 aaKnown RBP10.57□□□□□ -0.72
TMEM260-208ENST00000555905 HBEGFQ99075 208 aa10.57□□□□□ -0.72
TMEM260-208ENST00000555905 ZFYVE21Q9BQ24 234 aa10.57□□□□□ -0.72
TMEM260-208ENST00000555905 NUDT22Q9BRQ3 303 aa10.57□□□□□ -0.72
TMEM260-208ENST00000555905 SARGQ9BW04 601 aa10.57□□□□□ -0.72
TMEM260-208ENST00000555905 KLHL25Q9H0H3 589 aa10.57□□□□□ -0.72
TMEM260-208ENST00000555905 BRF2Q9HAW0 419 aa10.57□□□□□ -0.72
TMEM260-208ENST00000555905 KCNK13Q9HB14 408 aa10.57□□□□□ -0.72
TMEM260-208ENST00000555905 TCF7L2Q9NQB0 619 aa10.57□□□□□ -0.72
TMEM260-208ENST00000555905 NMRK1Q9NWW6 199 aa10.57□□□□□ -0.72
TMEM260-208ENST00000555905 SOHLH2Q9NX45 425 aa10.57□□□□□ -0.72
TMEM260-208ENST00000555905 KLHL3Q9UH77 587 aa10.57□□□□□ -0.72
TMEM260-208ENST00000555905 ARL2BPQ9Y2Y0 163 aa10.57□□□□□ -0.72
TMEM260-208ENST00000555905 PTGDR2Q9Y5Y4 395 aa10.57□□□□□ -0.72
TMEM260-208ENST00000555905 ASCC3Q8N3C0 2202 aaKnown RBP10.57□□□□□ -0.72
TMEM260-208ENST00000555905 UNC13CQ8NB66 2214 aa10.57□□□□□ -0.72
TMEM260-208ENST00000555905 ASXL3Q9C0F0 2248 aa10.56□□□□□ -0.72
TMEM260-208ENST00000555905 IGHV5-51A0A0C4DH38 117 aa10.56□□□□□ -0.72
TMEM260-208ENST00000555905 GOLGA8QA0A0J9YX86 632 aa10.56□□□□□ -0.72
TMEM260-208ENST00000555905 ATP6AP2A0A1C7CYW4 349 aa10.56□□□□□ -0.72
TMEM260-208ENST00000555905 A0A1W2PQM1 296 aa10.56□□□□□ -0.72
TMEM260-208ENST00000555905 GOLGA8OA6NCC3 632 aa10.56□□□□□ -0.72
TMEM260-208ENST00000555905 MAGEB17A8MXT2 336 aa10.56□□□□□ -0.72
TMEM260-208ENST00000555905 GOLGA8NF8WBI6 632 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms