RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 CCNG1P51959 295 aa6.61□□□□□ -1.35
SLIRP-204ENST00000555890 RAP1GDS1P52306 607 aa6.61□□□□□ -1.35
SLIRP-204ENST00000555890 AP1S2P56377 157 aa6.61□□□□□ -1.35
SLIRP-204ENST00000555890 PLOD1Q02809 727 aaPredicted RBP6.61□□□□□ -1.35
SLIRP-204ENST00000555890 ENPP2Q13822 863 aa6.61□□□□□ -1.35
SLIRP-204ENST00000555890 SLBPQ14493 270 aaKnown RBP eCLIP6.61□□□□□ -1.35
SLIRP-204ENST00000555890 GBX1Q14549 363 aa6.61□□□□□ -1.35
SLIRP-204ENST00000555890 STARD3Q14849 445 aa6.61□□□□□ -1.35
SLIRP-204ENST00000555890 RPS6KA2Q15349 733 aa6.61□□□□□ -1.35
SLIRP-204ENST00000555890 CST6Q15828 149 aa6.61□□□□□ -1.35
SLIRP-204ENST00000555890 GSTA3Q16772 222 aa6.61□□□□□ -1.35
SLIRP-204ENST00000555890 PPP1R3AQ16821 1122 aa6.61□□□□□ -1.35
SLIRP-204ENST00000555890 PRAMEF13Q5VWM6 474 aa6.61□□□□□ -1.35
SLIRP-204ENST00000555890 ZNF776Q68DI1 518 aaPredicted RBP6.61□□□□□ -1.35
SLIRP-204ENST00000555890 HIST2H2BDQ6DRA6 164 aa6.61□□□□□ -1.35
SLIRP-204ENST00000555890 RAET1GQ6H3X3 334 aa6.61□□□□□ -1.35
SLIRP-204ENST00000555890 TMEM220Q6QAJ8 160 aa6.61□□□□□ -1.35
SLIRP-204ENST00000555890 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.61□□□□□ -1.35
SLIRP-204ENST00000555890 LARP4Q71RC2 724 aaKnown RBP eCLIP6.61□□□□□ -1.352e-8■■□□□ 12.5
SLIRP-204ENST00000555890 TRMT11Q7Z4G4 463 aaKnown RBP6.61□□□□□ -1.35
SLIRP-204ENST00000555890 GOLGA7Q7Z5G4 137 aa6.61□□□□□ -1.35
SLIRP-204ENST00000555890 SYVN1Q86TM6 617 aa6.61□□□□□ -1.35
SLIRP-204ENST00000555890 SLCO6A1Q86UG4 719 aa6.61□□□□□ -1.35
SLIRP-204ENST00000555890 SNX32Q86XE0 403 aa6.61□□□□□ -1.35
SLIRP-204ENST00000555890 PELI3Q8N2H9 469 aa6.61□□□□□ -1.35
SLIRP-204ENST00000555890 POU5F2Q8N7G0 328 aa6.61□□□□□ -1.35
SLIRP-204ENST00000555890 RASGEF1AQ8N9B8 481 aa6.61□□□□□ -1.35
SLIRP-204ENST00000555890 KYQ8NBH2 561 aa6.61□□□□□ -1.35
SLIRP-204ENST00000555890 METTL6Q8TCB7 284 aa6.61□□□□□ -1.35
SLIRP-204ENST00000555890 NAT14Q8WUY8 206 aa6.61□□□□□ -1.35
SLIRP-204ENST00000555890 ATL1Q8WXF7 558 aa6.61□□□□□ -1.35
SLIRP-204ENST00000555890 ASB11Q8WXH4 323 aa6.61□□□□□ -1.35
SLIRP-204ENST00000555890 FGF11Q92914 225 aa6.61□□□□□ -1.35
SLIRP-204ENST00000555890 UTP4Q969X6 686 aaKnown RBP6.61□□□□□ -1.35
SLIRP-204ENST00000555890 RHBDF1Q96CC6 855 aa6.61□□□□□ -1.35
SLIRP-204ENST00000555890 TUBGCP3Q96CW5 907 aa6.61□□□□□ -1.35
SLIRP-204ENST00000555890 MAGEB10Q96LZ2 347 aaPredicted RBP6.61□□□□□ -1.35
SLIRP-204ENST00000555890 CCDC140Q96MF4 163 aa6.61□□□□□ -1.35
SLIRP-204ENST00000555890 FOPNLQ96NB1 174 aa6.61□□□□□ -1.35
SLIRP-204ENST00000555890 FANCD2OSQ96PS1 177 aa6.61□□□□□ -1.35
SLIRP-204ENST00000555890 ACOX2Q99424 681 aa6.61□□□□□ -1.35
SLIRP-204ENST00000555890 SERPINI1Q99574 410 aa6.61□□□□□ -1.35
SLIRP-204ENST00000555890 MIPEPQ99797 713 aa6.61□□□□□ -1.35
SLIRP-204ENST00000555890 SPOCK3Q9BQ16 436 aa6.61□□□□□ -1.35
SLIRP-204ENST00000555890 THTPAQ9BU02 230 aa6.61□□□□□ -1.35
SLIRP-204ENST00000555890 MRPL1Q9BYD6 325 aaKnown RBP6.61□□□□□ -1.35
SLIRP-204ENST00000555890 MKRN2Q9H000 416 aaKnown RBP6.61□□□□□ -1.35
SLIRP-204ENST00000555890 ZNF385DQ9H6B1 395 aa6.61□□□□□ -1.35
SLIRP-204ENST00000555890 C8orf33Q9H7E9 229 aaPredicted RBP6.61□□□□□ -1.35
SLIRP-204ENST00000555890 NOL11Q9H8H0 719 aaKnown RBP6.61□□□□□ -1.35
SLIRP-204ENST00000555890 AKTIPQ9H8T0 292 aa6.61□□□□□ -1.35
SLIRP-204ENST00000555890 IPPKQ9H8X2 491 aa6.61□□□□□ -1.35
SLIRP-204ENST00000555890 CPNE5Q9HCH3 593 aa6.61□□□□□ -1.35
SLIRP-204ENST00000555890 ZBTB26Q9HCK0 441 aa6.61□□□□□ -1.35
SLIRP-204ENST00000555890 FBRSL1Q9HCM7 1045 aaKnown RBP6.61□□□□□ -1.35
SLIRP-204ENST00000555890 TNFRSF12AQ9NP84 129 aa6.61□□□□□ -1.35
SLIRP-204ENST00000555890 ZIM2Q9NZV7 527 aa6.61□□□□□ -1.35
SLIRP-204ENST00000555890 MBD1Q9UIS9 605 aaPredicted RBP6.61□□□□□ -1.35
SLIRP-204ENST00000555890 ITM2BQ9Y287 266 aa6.61□□□□□ -1.35
SLIRP-204ENST00000555890 FADS3Q9Y5Q0 445 aa6.61□□□□□ -1.35
SLIRP-204ENST00000555890 DNAJC15Q9Y5T4 150 aa6.61□□□□□ -1.35
SLIRP-204ENST00000555890 ZFC3H1O60293 1989 aaKnown RBP6.6□□□□□ -1.35
SLIRP-204ENST00000555890 C17orf113A0A1B0GUU1 675 aa6.6□□□□□ -1.35
SLIRP-204ENST00000555890 ATP6AP2A0A1C7CYW4 349 aa6.6□□□□□ -1.35
SLIRP-204ENST00000555890 GFYI3L273 518 aa6.6□□□□□ -1.35
SLIRP-204ENST00000555890 M0R082 166 aa6.6□□□□□ -1.35
SLIRP-204ENST00000555890 PLK4O00444 970 aa6.6□□□□□ -1.35
SLIRP-204ENST00000555890 PPP6CO00743 305 aa6.6□□□□□ -1.35
SLIRP-204ENST00000555890 AIM2O14862 343 aa6.6□□□□□ -1.35
SLIRP-204ENST00000555890 LIN7AO14910 233 aaPredicted RBP6.6□□□□□ -1.35
SLIRP-204ENST00000555890 ATP6AP2O75787 350 aa6.6□□□□□ -1.35
SLIRP-204ENST00000555890 SLCO2B1O94956 709 aa6.6□□□□□ -1.35
SLIRP-204ENST00000555890 WDR47O94967 919 aa6.6□□□□□ -1.35
SLIRP-204ENST00000555890 PCDH8O95206 1070 aa6.6□□□□□ -1.35
SLIRP-204ENST00000555890 CATP04040 527 aaKnown RBP6.6□□□□□ -1.35
SLIRP-204ENST00000555890 SNRPB2P08579 225 aaKnown RBP6.6□□□□□ -1.35
SLIRP-204ENST00000555890 LINC00032P0C843 101 aa6.6□□□□□ -1.35
SLIRP-204ENST00000555890 EBLN1P0CF75 366 aa6.6□□□□□ -1.35
SLIRP-204ENST00000555890 IDO1P14902 403 aa6.6□□□□□ -1.35
SLIRP-204ENST00000555890 GM2AP17900 193 aa6.6□□□□□ -1.35
SLIRP-204ENST00000555890 NTSR1P30989 418 aa6.6□□□□□ -1.35
SLIRP-204ENST00000555890 GGT5P36269 586 aa6.6□□□□□ -1.35
SLIRP-204ENST00000555890 PRLHRP49683 370 aa6.6□□□□□ -1.35
SLIRP-204ENST00000555890 ACADVLP49748 655 aa6.6□□□□□ -1.35
SLIRP-204ENST00000555890 METAP1P53582 386 aa6.6□□□□□ -1.35
SLIRP-204ENST00000555890 FOXA1P55317 472 aa6.6□□□□□ -1.35
SLIRP-204ENST00000555890 ERVPABLB-1P60509 514 aa6.6□□□□□ -1.35
SLIRP-204ENST00000555890 RNF4P78317 190 aa6.6□□□□□ -1.35
SLIRP-204ENST00000555890 SLC25A3Q00325 362 aa6.6□□□□□ -1.35
SLIRP-204ENST00000555890 CNTN1Q12860 1018 aa6.6□□□□□ -1.35
SLIRP-204ENST00000555890 GRIK2Q13002 908 aa6.6□□□□□ -1.35
SLIRP-204ENST00000555890 ART3Q13508 389 aa6.6□□□□□ -1.35
SLIRP-204ENST00000555890 PIN1Q13526 163 aaPredicted RBP6.6□□□□□ -1.35
SLIRP-204ENST00000555890 FASTKQ14296 549 aaKnown RBP6.6□□□□□ -1.35
SLIRP-204ENST00000555890 PHKG1Q16816 387 aa6.6□□□□□ -1.35
SLIRP-204ENST00000555890 KIF19Q2TAC6 998 aa6.6□□□□□ -1.35
SLIRP-204ENST00000555890 MMEL1Q495T6 779 aa6.6□□□□□ -1.35
SLIRP-204ENST00000555890 BCL7AQ4VC05 210 aa6.6□□□□□ -1.35
SLIRP-204ENST00000555890 AGKQ53H12 422 aa6.6□□□□□ -1.35
SLIRP-204ENST00000555890 FBXO48Q5FWF7 155 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms