RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 CCL7P80098 99 aa10.74□□□□□ -0.69
SHMT2-220ENST00000555634 CBX1P83916 185 aa10.74□□□□□ -0.69
SHMT2-220ENST00000555634 MEF2AQ02078 507 aaPredicted RBP10.74□□□□□ -0.69
SHMT2-220ENST00000555634 SQSTM1Q13501 440 aa10.74□□□□□ -0.69
SHMT2-220ENST00000555634 E2F2Q14209 437 aa10.74□□□□□ -0.69
SHMT2-220ENST00000555634 SPIN4Q56A73 249 aa10.74□□□□□ -0.69
SHMT2-220ENST00000555634 TCTE1Q5JU00 501 aa10.74□□□□□ -0.69
SHMT2-220ENST00000555634 ZNF425Q6IV72 752 aa10.74□□□□□ -0.69
SHMT2-220ENST00000555634 NIPAL1Q6NVV3 410 aa10.74□□□□□ -0.69
SHMT2-220ENST00000555634 CHSY3Q70JA7 882 aa10.74□□□□□ -0.69
SHMT2-220ENST00000555634 ABHD13Q7L211 337 aa10.74□□□□□ -0.69
SHMT2-220ENST00000555634 PAGE2Q7Z2X7 111 aa10.74□□□□□ -0.69
SHMT2-220ENST00000555634 ASPGQ86U10 573 aa10.74□□□□□ -0.69
SHMT2-220ENST00000555634 FAM129CQ86XR2 697 aa10.74□□□□□ -0.69
SHMT2-220ENST00000555634 PARP9Q8IXQ6 854 aa10.74□□□□□ -0.69
SHMT2-220ENST00000555634 LAS2Q8IYD9 372 aa10.74□□□□□ -0.69
SHMT2-220ENST00000555634 GPR135Q8IZ08 494 aa10.74□□□□□ -0.69
SHMT2-220ENST00000555634 CACNA2D3Q8IZS8 1091 aa10.74□□□□□ -0.69
SHMT2-220ENST00000555634 MFSD9Q8NBP5 474 aa10.74□□□□□ -0.69
SHMT2-220ENST00000555634 CAMKVQ8NCB2 501 aa10.74□□□□□ -0.69
SHMT2-220ENST00000555634 SRFBP1Q8NEF9 429 aaKnown RBP10.74□□□□□ -0.69
SHMT2-220ENST00000555634 OR7G3Q8NG95 312 aa10.74□□□□□ -0.69
SHMT2-220ENST00000555634 OR4K1Q8NGD4 311 aa10.74□□□□□ -0.69
SHMT2-220ENST00000555634 STON2Q8WXE9 905 aa10.74□□□□□ -0.69
SHMT2-220ENST00000555634 MOCOSQ96EN8 888 aa10.74□□□□□ -0.69
SHMT2-220ENST00000555634 CMTM7Q96FZ5 175 aa10.74□□□□□ -0.69
SHMT2-220ENST00000555634 QRFPRQ96P65 431 aa10.74□□□□□ -0.69
SHMT2-220ENST00000555634 KCNA7Q96RP8 456 aa10.74□□□□□ -0.69
SHMT2-220ENST00000555634 MAP3K3Q99759 626 aa10.74□□□□□ -0.69
SHMT2-220ENST00000555634 ELAC2Q9BQ52 826 aaKnown RBP10.74□□□□□ -0.69
SHMT2-220ENST00000555634 C20orf27Q9GZN8 174 aa10.74□□□□□ -0.69
SHMT2-220ENST00000555634 PSD3Q9NYI0 1048 aa10.74□□□□□ -0.69
SHMT2-220ENST00000555634 ZFP69BQ9UJL9 534 aa10.74□□□□□ -0.69
SHMT2-220ENST00000555634 SLC12A4Q9UP95 1085 aa10.74□□□□□ -0.69
SHMT2-220ENST00000555634 SH2B3Q9UQQ2 575 aa10.74□□□□□ -0.69
SHMT2-220ENST00000555634 BTRCQ9Y297 605 aa10.74□□□□□ -0.69
SHMT2-220ENST00000555634 TSC22D4Q9Y3Q8 395 aa10.74□□□□□ -0.69
SHMT2-220ENST00000555634 TIMM22Q9Y584 194 aa10.74□□□□□ -0.69
SHMT2-220ENST00000555634 PCDHGA1Q9Y5H4 931 aa10.74□□□□□ -0.69
SHMT2-220ENST00000555634 KLK4Q9Y5K2 254 aa10.74□□□□□ -0.69
SHMT2-220ENST00000555634 DNAJC15Q9Y5T4 150 aa10.74□□□□□ -0.69
SHMT2-220ENST00000555634 LY6G6EA0A0G2JKS1 128 aa10.73□□□□□ -0.69
SHMT2-220ENST00000555634 FEZF1A0PJY2 475 aa10.73□□□□□ -0.69
SHMT2-220ENST00000555634 SLC9B1P1A6NJY1 282 aa10.73□□□□□ -0.69
SHMT2-220ENST00000555634 FOXE1O00358 373 aaPredicted RBP10.73□□□□□ -0.69
SHMT2-220ENST00000555634 ZSCAN9O15535 394 aaPredicted RBP10.73□□□□□ -0.69
SHMT2-220ENST00000555634 GFRA3O60609 400 aa10.73□□□□□ -0.69
SHMT2-220ENST00000555634 CLEC3AO75596 197 aa10.73□□□□□ -0.69
SHMT2-220ENST00000555634 DCTN3O75935 186 aa10.73□□□□□ -0.69
SHMT2-220ENST00000555634 RSL1D1O76021 490 aaKnown RBP10.73□□□□□ -0.69
SHMT2-220ENST00000555634 PDYNP01213 254 aa10.73□□□□□ -0.69
SHMT2-220ENST00000555634 C9P02748 559 aa10.73□□□□□ -0.69
SHMT2-220ENST00000555634 LINC00032P0C843 101 aa10.73□□□□□ -0.69
SHMT2-220ENST00000555634 ST6GAL1P15907 406 aa10.73□□□□□ -0.69
SHMT2-220ENST00000555634 ALOX15P16050 662 aaPredicted RBP10.73□□□□□ -0.69
SHMT2-220ENST00000555634 DDX5P17844 614 aaKnown RBP10.73□□□□□ -0.69
SHMT2-220ENST00000555634 PTX3P26022 381 aaPredicted RBP10.73□□□□□ -0.69
SHMT2-220ENST00000555634 CSTF2P33240 577 aaKnown RBP eCLIP10.73□□□□□ -0.69
SHMT2-220ENST00000555634 INHBCP55103 352 aa10.73□□□□□ -0.69
SHMT2-220ENST00000555634 CYP4F2P78329 520 aa10.73□□□□□ -0.69
SHMT2-220ENST00000555634 ACY1Q03154 408 aa10.73□□□□□ -0.69
SHMT2-220ENST00000555634 BTKQ06187 659 aa10.73□□□□□ -0.69
SHMT2-220ENST00000555634 ACSM2AQ08AH3 577 aa10.73□□□□□ -0.69
SHMT2-220ENST00000555634 PWP1Q13610 501 aa10.73□□□□□ -0.69
SHMT2-220ENST00000555634 NDUFA9Q16795 377 aa10.73□□□□□ -0.69
SHMT2-220ENST00000555634 ZXDCQ2QGD7 858 aaPredicted RBP10.73□□□□□ -0.69
SHMT2-220ENST00000555634 TMEM35AQ53FP2 167 aa10.73□□□□□ -0.69
SHMT2-220ENST00000555634 ACSM2BQ68CK6 577 aa10.73□□□□□ -0.69
SHMT2-220ENST00000555634 TRIM40Q6P9F5 258 aa10.73□□□□□ -0.69
SHMT2-220ENST00000555634 USP53Q70EK8 1073 aa10.73□□□□□ -0.69
SHMT2-220ENST00000555634 RNF44Q7L0R7 432 aa10.73□□□□□ -0.69
SHMT2-220ENST00000555634 PAQR7Q86WK9 346 aa10.73□□□□□ -0.69
SHMT2-220ENST00000555634 TTC29Q8NA56 475 aaPredicted RBP10.73□□□□□ -0.69
SHMT2-220ENST00000555634 CCDC197Q8NCU1 140 aa10.73□□□□□ -0.69
SHMT2-220ENST00000555634 HUS1BQ8NHY5 278 aa10.73□□□□□ -0.69
SHMT2-220ENST00000555634 USP7Q93009 1102 aa10.73□□□□□ -0.69
SHMT2-220ENST00000555634 THOC1Q96FV9 657 aaKnown RBP10.73□□□□□ -0.69
SHMT2-220ENST00000555634 METTL2AQ96IZ6 378 aaKnown RBP10.73□□□□□ -0.69
SHMT2-220ENST00000555634 PPP1R36Q96LQ0 422 aa10.73□□□□□ -0.69
SHMT2-220ENST00000555634 CCDC74BQ96LY2 380 aa10.73□□□□□ -0.69
SHMT2-220ENST00000555634 TRAPPC9Q96Q05 1148 aa10.73□□□□□ -0.69
SHMT2-220ENST00000555634 CCT8L2Q96SF2 557 aa10.73□□□□□ -0.69
SHMT2-220ENST00000555634 MTERF1Q99551 399 aaKnown RBP10.73□□□□□ -0.69
SHMT2-220ENST00000555634 NUDT22Q9BRQ3 303 aa10.73□□□□□ -0.69
SHMT2-220ENST00000555634 TMEM120AQ9BXJ8 343 aa10.73□□□□□ -0.69
SHMT2-220ENST00000555634 SLC7A5P2Q9GIP4 190 aa10.73□□□□□ -0.69
SHMT2-220ENST00000555634 ROGDIQ9GZN7 287 aa10.73□□□□□ -0.69
SHMT2-220ENST00000555634 KLHL25Q9H0H3 589 aa10.73□□□□□ -0.69
SHMT2-220ENST00000555634 ZNF768Q9H5H4 540 aaKnown RBP10.73□□□□□ -0.69
SHMT2-220ENST00000555634 ZNF395Q9H8N7 513 aaPredicted RBP10.73□□□□□ -0.69
SHMT2-220ENST00000555634 MEAF6Q9HAF1 191 aa10.73□□□□□ -0.69
SHMT2-220ENST00000555634 TCF7L2Q9NQB0 619 aa10.73□□□□□ -0.69
SHMT2-220ENST00000555634 DMRT3Q9NQL9 472 aa10.73□□□□□ -0.69
SHMT2-220ENST00000555634 VPS29Q9UBQ0 182 aa10.73□□□□□ -0.69
SHMT2-220ENST00000555634 PPT2Q9UMR5 302 aa10.73□□□□□ -0.69
SHMT2-220ENST00000555634 PLCL2Q9UPR0 1127 aa10.73□□□□□ -0.69
SHMT2-220ENST00000555634 EIF3LQ9Y262 564 aaKnown RBP10.73□□□□□ -0.69
SHMT2-220ENST00000555634 ARL2BPQ9Y2Y0 163 aa10.73□□□□□ -0.69
SHMT2-220ENST00000555634 TMED5Q9Y3A6 229 aa10.73□□□□□ -0.69
SHMT2-220ENST00000555634 PCDHGA4Q9Y5G9 962 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms