RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 HS3ST3B1Q9Y662 390 aa19.49■□□□□ 0.71
VTI1B-205ENST00000555543 NUP210LQ5VU65 1888 aa19.49■□□□□ 0.71
VTI1B-205ENST00000555543 IGLV3-12A0A075B6K2 115 aa19.48■□□□□ 0.71
VTI1B-205ENST00000555543 J3QKU1 62 aa19.48■□□□□ 0.71
VTI1B-205ENST00000555543 PEX12O00623 359 aa19.48■□□□□ 0.71
VTI1B-205ENST00000555543 ALOX12BO75342 701 aa19.48■□□□□ 0.71
VTI1B-205ENST00000555543 ANXA5P08758 320 aa19.48■□□□□ 0.71
VTI1B-205ENST00000555543 ZGLP1P0C6A0 271 aa19.48■□□□□ 0.71
VTI1B-205ENST00000555543 CD1DP15813 335 aa19.48■□□□□ 0.71
VTI1B-205ENST00000555543 SLC26A3P40879 764 aa19.48■□□□□ 0.71
VTI1B-205ENST00000555543 CCR8P51685 355 aa19.48■□□□□ 0.71
VTI1B-205ENST00000555543 PGDP52209 483 aa19.48■□□□□ 0.71
VTI1B-205ENST00000555543 RAB10P61026 200 aa19.48■□□□□ 0.71
VTI1B-205ENST00000555543 NAB1Q13506 487 aa19.48■□□□□ 0.71
VTI1B-205ENST00000555543 RAPSNQ13702 412 aa19.48■□□□□ 0.71
VTI1B-205ENST00000555543 SLMAPQ14BN4 828 aa19.48■□□□□ 0.71
VTI1B-205ENST00000555543 OR4D1Q15615 310 aa19.48■□□□□ 0.71
VTI1B-205ENST00000555543 SYT16Q17RD7 645 aa19.48■□□□□ 0.71
VTI1B-205ENST00000555543 VWA2Q5GFL6 755 aa19.48■□□□□ 0.71
VTI1B-205ENST00000555543 ATG14Q6ZNE5 492 aa19.48■□□□□ 0.71
VTI1B-205ENST00000555543 FRA10AC1Q70Z53 315 aa19.48■□□□□ 0.71
VTI1B-205ENST00000555543 THOC6Q86W42 341 aaKnown RBP19.48■□□□□ 0.71
VTI1B-205ENST00000555543 SHISA5Q8N114 240 aa19.48■□□□□ 0.71
VTI1B-205ENST00000555543 ZNF740Q8NDX6 193 aa19.48■□□□□ 0.71
VTI1B-205ENST00000555543 KIF18AQ8NI77 898 aa19.48■□□□□ 0.71
VTI1B-205ENST00000555543 SLC5A11Q8WWX8 675 aa19.48■□□□□ 0.71
VTI1B-205ENST00000555543 RHBDF1Q96CC6 855 aa19.48■□□□□ 0.71
VTI1B-205ENST00000555543 TM4SF19Q96DZ7 209 aa19.48■□□□□ 0.71
VTI1B-205ENST00000555543 THAP11Q96EK4 314 aa19.48■□□□□ 0.71
VTI1B-205ENST00000555543 UBXN10Q96LJ8 280 aa19.48■□□□□ 0.71
VTI1B-205ENST00000555543 CRB3Q9BUF7 120 aa19.48■□□□□ 0.71
VTI1B-205ENST00000555543 EPN3Q9H201 632 aa19.48■□□□□ 0.71
VTI1B-205ENST00000555543 TRPC4Q9UBN4 977 aa19.48■□□□□ 0.71
VTI1B-205ENST00000555543 FBXL4Q9UKA2 621 aa19.48■□□□□ 0.71
VTI1B-205ENST00000555543 CDC14AQ9UNH5 594 aa19.48■□□□□ 0.71
VTI1B-205ENST00000555543 SLC22A14Q9Y267 594 aa19.48■□□□□ 0.71
VTI1B-205ENST00000555543 NCF1BA6NI72 391 aaPredicted RBP19.47■□□□□ 0.71
VTI1B-205ENST00000555543 NCF1CA8MVU1 366 aaPredicted RBP19.47■□□□□ 0.71
VTI1B-205ENST00000555543 AGPSO00116 658 aa19.47■□□□□ 0.71
VTI1B-205ENST00000555543 SLC35E2BP0CK96 405 aa19.47■□□□□ 0.71
VTI1B-205ENST00000555543 NCF1P14598 390 aaPredicted RBP19.47■□□□□ 0.71
VTI1B-205ENST00000555543 MAT1AQ00266 395 aaKnown RBP19.47■□□□□ 0.71
VTI1B-205ENST00000555543 OCA2Q04671 838 aa19.47■□□□□ 0.71
VTI1B-205ENST00000555543 FAM53BQ14153 422 aa19.47■□□□□ 0.71
VTI1B-205ENST00000555543 CSHL1Q14406 222 aa19.47■□□□□ 0.71
VTI1B-205ENST00000555543 TGFBIQ15582 683 aa19.47■□□□□ 0.71
VTI1B-205ENST00000555543 TMEM214Q6NUQ4 689 aaKnown RBP19.47■□□□□ 0.71
VTI1B-205ENST00000555543 KIRREL2Q6UWL6 708 aa19.47■□□□□ 0.71
VTI1B-205ENST00000555543 ASPGQ86U10 573 aa19.47■□□□□ 0.71
VTI1B-205ENST00000555543 LAPTM4BQ86VI4 370 aa19.47■□□□□ 0.71
VTI1B-205ENST00000555543 MFSD9Q8NBP5 474 aa19.47■□□□□ 0.71
VTI1B-205ENST00000555543 KCT2Q8NC54 265 aa19.47■□□□□ 0.71
VTI1B-205ENST00000555543 OR9A4Q8NGU2 314 aa19.47■□□□□ 0.71
VTI1B-205ENST00000555543 IFT81Q8WYA0 676 aa19.47■□□□□ 0.71
VTI1B-205ENST00000555543 MIEF2Q96C03 454 aa19.47■□□□□ 0.71
VTI1B-205ENST00000555543 MRRFQ96E11 262 aaKnown RBP19.47■□□□□ 0.71
VTI1B-205ENST00000555543 MOCOSQ96EN8 888 aa19.47■□□□□ 0.71
VTI1B-205ENST00000555543 FER1L6-AS2Q96M78 137 aa19.47■□□□□ 0.71
VTI1B-205ENST00000555543 SARGQ9BW04 601 aa19.47■□□□□ 0.71
VTI1B-205ENST00000555543 ANAPC2Q9UJX6 822 aa19.47■□□□□ 0.71
VTI1B-205ENST00000555543 PRPF4O43172 522 aaKnown RBP eCLIP19.46■□□□□ 0.71
VTI1B-205ENST00000555543 IL1RNP18510 177 aa19.46■□□□□ 0.71
VTI1B-205ENST00000555543 GRK3P35626 688 aa19.46■□□□□ 0.71
VTI1B-205ENST00000555543 GDF5P43026 501 aa19.46■□□□□ 0.71
VTI1B-205ENST00000555543 SLC6A12P48065 614 aa19.46■□□□□ 0.71
VTI1B-205ENST00000555543 KLRB1Q12918 225 aa19.46■□□□□ 0.71
VTI1B-205ENST00000555543 DLG1Q12959 904 aa19.46■□□□□ 0.71
VTI1B-205ENST00000555543 BMPR2Q13873 1038 aa19.46■□□□□ 0.71
VTI1B-205ENST00000555543 NDUFA9Q16795 377 aa19.46■□□□□ 0.71
VTI1B-205ENST00000555543 TMPRSS11BQ86T26 416 aa19.46■□□□□ 0.71
VTI1B-205ENST00000555543 RELL1Q8IUW5 271 aa19.46■□□□□ 0.71
VTI1B-205ENST00000555543 CAMKVQ8NCB2 501 aa19.46■□□□□ 0.71
VTI1B-205ENST00000555543 ZCCHC10Q8TBK6 192 aa19.46■□□□□ 0.71
VTI1B-205ENST00000555543 SLC13A3Q8WWT9 602 aa19.46■□□□□ 0.71
VTI1B-205ENST00000555543 NACC2Q96BF6 587 aa19.46■□□□□ 0.71
VTI1B-205ENST00000555543 TMEM79Q9BSE2 394 aa19.46■□□□□ 0.71
VTI1B-205ENST00000555543 FAM129AQ9BZQ8 928 aa19.46■□□□□ 0.71
VTI1B-205ENST00000555543 CDC42EP4Q9H3Q1 356 aaKnown RBP19.46■□□□□ 0.71
VTI1B-205ENST00000555543 SEMA3GQ9NS98 782 aa19.46■□□□□ 0.71
VTI1B-205ENST00000555543 MTRF1LQ9UGC7 380 aaKnown RBP19.46■□□□□ 0.71
VTI1B-205ENST00000555543 C3orf18Q9UK00 162 aa19.46■□□□□ 0.71
VTI1B-205ENST00000555543 MAP4K5Q9Y4K4 846 aa19.46■□□□□ 0.71
VTI1B-205ENST00000555543 UBR5O95071 2799 aaPredicted RBP19.46■□□□□ 0.71
VTI1B-205ENST00000555543 TRBC2A0A5B9 178 aa19.45■□□□□ 0.7
VTI1B-205ENST00000555543 HMX2A2RU54 273 aa19.45■□□□□ 0.7
VTI1B-205ENST00000555543 OR1F1O43749 312 aa19.45■□□□□ 0.7
VTI1B-205ENST00000555543 CASRP41180 1078 aa19.45■□□□□ 0.7
VTI1B-205ENST00000555543 HNMTP50135 292 aa19.45■□□□□ 0.7
VTI1B-205ENST00000555543 EFNA3P52797 238 aa19.45■□□□□ 0.7
VTI1B-205ENST00000555543 ATP6V0D1P61421 351 aa19.45■□□□□ 0.7
VTI1B-205ENST00000555543 REEP5Q00765 189 aa19.45■□□□□ 0.7
VTI1B-205ENST00000555543 TLE1Q04724 770 aa19.45■□□□□ 0.7
VTI1B-205ENST00000555543 RBBP7Q16576 425 aa19.45■□□□□ 0.7
VTI1B-205ENST00000555543 GLE1Q53GS7 698 aaKnown RBP19.45■□□□□ 0.7
VTI1B-205ENST00000555543 FBXO48Q5FWF7 155 aa19.45■□□□□ 0.7
VTI1B-205ENST00000555543 PDSS2Q86YH6 399 aa19.45■□□□□ 0.7
VTI1B-205ENST00000555543 GPSM1Q86YR5 675 aa19.45■□□□□ 0.7
VTI1B-205ENST00000555543 ZC3H7AQ8IWR0 971 aaKnown RBP19.45■□□□□ 0.7
VTI1B-205ENST00000555543 KLHDC8AQ8IYD2 350 aa19.45■□□□□ 0.7
VTI1B-205ENST00000555543 GALNT16Q8N428 558 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms