RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 TRBC2A0A5B9 178 aa10.13□□□□□ -0.79
TMEM260-206ENST00000555046 HYKKA2RU49 373 aa10.13□□□□□ -0.79
TMEM260-206ENST00000555046 C9J4A7 227 aa10.13□□□□□ -0.79
TMEM260-206ENST00000555046 H0YGG7 62 aa10.13□□□□□ -0.79
TMEM260-206ENST00000555046 PRPF4O43172 522 aaKnown RBP eCLIP10.13□□□□□ -0.79
TMEM260-206ENST00000555046 SLC28A2O43868 658 aa10.13□□□□□ -0.79
TMEM260-206ENST00000555046 CCNT2O60583 730 aaKnown RBP10.13□□□□□ -0.79
TMEM260-206ENST00000555046 CTSVO60911 334 aa10.13□□□□□ -0.79
TMEM260-206ENST00000555046 RFPL1O75677 317 aa10.13□□□□□ -0.79
TMEM260-206ENST00000555046 EIF2S1P05198 315 aaKnown RBP10.13□□□□□ -0.79
TMEM260-206ENST00000555046 C1GALT1C1LP0DN25 315 aa10.13□□□□□ -0.79
TMEM260-206ENST00000555046 CDH1P12830 882 aa10.13□□□□□ -0.79
TMEM260-206ENST00000555046 EPB42P16452 691 aa10.13□□□□□ -0.79
TMEM260-206ENST00000555046 TCN2P20062 427 aa10.13□□□□□ -0.79
TMEM260-206ENST00000555046 GCAP28676 217 aa10.13□□□□□ -0.79
TMEM260-206ENST00000555046 AHRP35869 848 aa10.13□□□□□ -0.79
TMEM260-206ENST00000555046 STAT5AP42229 794 aa10.13□□□□□ -0.79
TMEM260-206ENST00000555046 SLC6A12P48065 614 aa10.13□□□□□ -0.79
TMEM260-206ENST00000555046 KCNC1P48547 511 aa10.13□□□□□ -0.79
TMEM260-206ENST00000555046 TMPRSS3P57727 454 aa10.13□□□□□ -0.79
TMEM260-206ENST00000555046 VSX2P58304 361 aaPredicted RBP10.13□□□□□ -0.79
TMEM260-206ENST00000555046 ARF3P61204 181 aaPredicted RBP10.13□□□□□ -0.79
TMEM260-206ENST00000555046 NAA20P61599 178 aa10.13□□□□□ -0.79
TMEM260-206ENST00000555046 SKP1P63208 163 aa10.13□□□□□ -0.79
TMEM260-206ENST00000555046 CSNK1G2P78368 415 aa10.13□□□□□ -0.79
TMEM260-206ENST00000555046 TLE3Q04726 772 aa10.13□□□□□ -0.79
TMEM260-206ENST00000555046 DLG1Q12959 904 aa10.13□□□□□ -0.79
TMEM260-206ENST00000555046 CDC16Q13042 620 aa10.13□□□□□ -0.79
TMEM260-206ENST00000555046 PDK4Q16654 411 aa10.13□□□□□ -0.79
TMEM260-206ENST00000555046 PFKFB4Q16877 469 aa10.13□□□□□ -0.79
TMEM260-206ENST00000555046 UBAP2Q5T6F2 1119 aaKnown RBP10.13□□□□□ -0.79
TMEM260-206ENST00000555046 PRMT9Q6P2P2 845 aa10.13□□□□□ -0.79
TMEM260-206ENST00000555046 RNF44Q7L0R7 432 aa10.13□□□□□ -0.79
TMEM260-206ENST00000555046 SPNS2Q8IVW8 549 aa10.13□□□□□ -0.79
TMEM260-206ENST00000555046 HOMEZQ8IX15 550 aa10.13□□□□□ -0.79
TMEM260-206ENST00000555046 CSNK1A1LQ8N752 337 aa10.13□□□□□ -0.79
TMEM260-206ENST00000555046 TRPV3Q8NET8 790 aa10.13□□□□□ -0.79
TMEM260-206ENST00000555046 SLC13A3Q8WWT9 602 aa10.13□□□□□ -0.79
TMEM260-206ENST00000555046 MR1Q95460 341 aa10.13□□□□□ -0.79
TMEM260-206ENST00000555046 CCDC126Q96EE4 140 aa10.13□□□□□ -0.79
TMEM260-206ENST00000555046 MVB12AQ96EY5 273 aa10.13□□□□□ -0.79
TMEM260-206ENST00000555046 PKNOX2Q96KN3 472 aa10.13□□□□□ -0.79
TMEM260-206ENST00000555046 GPR78Q96P69 363 aa10.13□□□□□ -0.79
TMEM260-206ENST00000555046 OR2A5Q96R48 311 aa10.13□□□□□ -0.79
TMEM260-206ENST00000555046 TMEM109Q9BVC6 243 aa10.13□□□□□ -0.79
TMEM260-206ENST00000555046 UNKQ9C0B0 810 aaKnown RBP10.13□□□□□ -0.79
TMEM260-206ENST00000555046 SLC6A20Q9NP91 592 aa10.13□□□□□ -0.79
TMEM260-206ENST00000555046 CUTCQ9NTM9 273 aa10.13□□□□□ -0.79
TMEM260-206ENST00000555046 OPTCQ9UBM4 332 aa10.13□□□□□ -0.79
TMEM260-206ENST00000555046 GPN3Q9UHW5 284 aaPredicted RBP10.13□□□□□ -0.79
TMEM260-206ENST00000555046 BSNQ9UPA5 3926 aa10.12□□□□□ -0.79
TMEM260-206ENST00000555046 TEX51A0A1B0GUA7 166 aa10.12□□□□□ -0.79
TMEM260-206ENST00000555046 A0A1B0GX78 115 aa10.12□□□□□ -0.79
TMEM260-206ENST00000555046 CCDC151A5D8V7 595 aa10.12□□□□□ -0.79
TMEM260-206ENST00000555046 STX16-NPEPL1H3BU86 382 aa10.12□□□□□ -0.79
TMEM260-206ENST00000555046 K7EPI3 171 aa10.12□□□□□ -0.79
TMEM260-206ENST00000555046 STX16O14662 325 aa10.12□□□□□ -0.79
TMEM260-206ENST00000555046 OR1F1O43749 312 aa10.12□□□□□ -0.79
TMEM260-206ENST00000555046 KLK8O60259 260 aa10.12□□□□□ -0.79
TMEM260-206ENST00000555046 ALBP02768 609 aa10.12□□□□□ -0.79
TMEM260-206ENST00000555046 SHBGP04278 402 aa10.12□□□□□ -0.79
TMEM260-206ENST00000555046 RAB40ALP0C0E4 278 aa10.12□□□□□ -0.79
TMEM260-206ENST00000555046 SLC35G6P0C7Q6 338 aa10.12□□□□□ -0.79
TMEM260-206ENST00000555046 PYGBP11216 843 aa10.12□□□□□ -0.79
TMEM260-206ENST00000555046 ZNF28P17035 718 aa10.12□□□□□ -0.79
TMEM260-206ENST00000555046 GDF5P43026 501 aa10.12□□□□□ -0.79
TMEM260-206ENST00000555046 SLCO1A2P46721 670 aa10.12□□□□□ -0.79
TMEM260-206ENST00000555046 GLRBP48167 497 aa10.12□□□□□ -0.79
TMEM260-206ENST00000555046 HSPA7P48741 367 aa10.12□□□□□ -0.79
TMEM260-206ENST00000555046 IRF9Q00978 393 aa10.12□□□□□ -0.79
TMEM260-206ENST00000555046 PCDH1Q08174 1060 aa10.12□□□□□ -0.79
TMEM260-206ENST00000555046 VAC14Q08AM6 782 aa10.12□□□□□ -0.79
TMEM260-206ENST00000555046 PWP1Q13610 501 aa10.12□□□□□ -0.79
TMEM260-206ENST00000555046 FAM53BQ14153 422 aa10.12□□□□□ -0.79
TMEM260-206ENST00000555046 PCBP2Q15366 365 aaKnown RBP eCLIP10.12□□□□□ -0.79
TMEM260-206ENST00000555046 TBCCQ15814 346 aa10.12□□□□□ -0.79
TMEM260-206ENST00000555046 DEFB110Q30KQ9 67 aa10.12□□□□□ -0.79
TMEM260-206ENST00000555046 CCDC153Q494R4 210 aa10.12□□□□□ -0.79
TMEM260-206ENST00000555046 ATG9BQ674R7 924 aa10.12□□□□□ -0.79
TMEM260-206ENST00000555046 SLC22A9Q8IVM8 553 aa10.12□□□□□ -0.79
TMEM260-206ENST00000555046 DSELQ8IZU8 1212 aa10.12□□□□□ -0.79
TMEM260-206ENST00000555046 SNX31Q8N9S9 440 aa10.12□□□□□ -0.79
TMEM260-206ENST00000555046 MFSD9Q8NBP5 474 aa10.12□□□□□ -0.79
TMEM260-206ENST00000555046 UBTD2Q8WUN7 234 aa10.12□□□□□ -0.79
TMEM260-206ENST00000555046 EXT2Q93063 718 aa10.12□□□□□ -0.79
TMEM260-206ENST00000555046 NEIL2Q969S2 332 aa10.12□□□□□ -0.79
TMEM260-206ENST00000555046 PTCD3Q96EY7 689 aaKnown RBP10.12□□□□□ -0.79
TMEM260-206ENST00000555046 MAGEB10Q96LZ2 347 aaPredicted RBP10.12□□□□□ -0.79
TMEM260-206ENST00000555046 OR4K3Q96R72 315 aa10.12□□□□□ -0.79
TMEM260-206ENST00000555046 EFCAB11Q9BUY7 163 aa10.12□□□□□ -0.79
TMEM260-206ENST00000555046 NT5DC2Q9H857 520 aa10.12□□□□□ -0.79
TMEM260-206ENST00000555046 NDOR1Q9UHB4 597 aa10.12□□□□□ -0.79
TMEM260-206ENST00000555046 ADGRE2Q9UHX3 823 aa10.12□□□□□ -0.79
TMEM260-206ENST00000555046 ZFP69BQ9UJL9 534 aa10.12□□□□□ -0.79
TMEM260-206ENST00000555046 FARSAQ9Y285 508 aaKnown RBP10.12□□□□□ -0.79
TMEM260-206ENST00000555046 PADI2Q9Y2J8 665 aa10.12□□□□□ -0.79
TMEM260-206ENST00000555046 PCDHGA6Q9Y5G7 932 aa10.12□□□□□ -0.79
TMEM260-206ENST00000555046 TLN1Q9Y490 2541 aaKnown RBP10.12□□□□□ -0.79
TMEM260-206ENST00000555046 ICE1Q9Y2F5 2266 aa10.11□□□□□ -0.79
TMEM260-206ENST00000555046 LOC105369274A0A096LPK9 316 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms