RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 SPRYD7Q5W111 196 aa13.56□□□□□ -0.24
VTI1B-204ENST00000554659 ZNF627Q7L945 461 aa13.56□□□□□ -0.24
VTI1B-204ENST00000554659 OSTM1Q86WC4 334 aa13.56□□□□□ -0.24
VTI1B-204ENST00000554659 NPAS3Q8IXF0 933 aa13.56□□□□□ -0.24
VTI1B-204ENST00000554659 AQP11Q8NBQ7 271 aa13.56□□□□□ -0.24
VTI1B-204ENST00000554659 TMEM203Q969S6 136 aa13.56□□□□□ -0.24
VTI1B-204ENST00000554659 ADAMTS10Q9H324 1103 aa13.56□□□□□ -0.24
VTI1B-204ENST00000554659 DPAGT1Q9H3H5 408 aa13.56□□□□□ -0.24
VTI1B-204ENST00000554659 SDHDO14521 159 aa13.56□□□□□ -0.24
VTI1B-204ENST00000554659 GNB5O14775 395 aa13.56□□□□□ -0.24
VTI1B-204ENST00000554659 ZNF208O43345 1280 aa13.56□□□□□ -0.24
VTI1B-204ENST00000554659 EPOP01588 193 aa13.56□□□□□ -0.24
VTI1B-204ENST00000554659 ALDOAP04075 364 aaKnown RBP13.56□□□□□ -0.24
VTI1B-204ENST00000554659 TGFBIQ15582 683 aa13.56□□□□□ -0.24
VTI1B-204ENST00000554659 CLEC12AQ5QGZ9 265 aa13.56□□□□□ -0.24
VTI1B-204ENST00000554659 GET4Q7L5D6 327 aaPredicted RBP13.56□□□□□ -0.24
VTI1B-204ENST00000554659 OR2AP1Q8NGE2 309 aa13.56□□□□□ -0.24
VTI1B-204ENST00000554659 NR4A3Q92570 626 aa13.56□□□□□ -0.24
VTI1B-204ENST00000554659 DEFB118Q96PH6 123 aa13.56□□□□□ -0.24
VTI1B-204ENST00000554659 TRIM36Q9NQ86 728 aa13.56□□□□□ -0.24
VTI1B-204ENST00000554659 CCM2LQ9NUG4 571 aaPredicted RBP13.56□□□□□ -0.24
VTI1B-204ENST00000554659 CUEDC1Q9NWM3 386 aaPredicted RBP13.56□□□□□ -0.24
VTI1B-204ENST00000554659 PRSS51A0A1B0GVH4 220 aa13.55□□□□□ -0.24
VTI1B-204ENST00000554659 SMCO3A2RU48 225 aa13.55□□□□□ -0.24
VTI1B-204ENST00000554659 M0R036 132 aa13.55□□□□□ -0.24
VTI1B-204ENST00000554659 RASAL1O95294 804 aa13.55□□□□□ -0.24
VTI1B-204ENST00000554659 LHCGRP22888 699 aa13.55□□□□□ -0.24
VTI1B-204ENST00000554659 ERVK-21P61565 698 aa13.55□□□□□ -0.24
VTI1B-204ENST00000554659 RAB12Q6IQ22 244 aa13.55□□□□□ -0.24
VTI1B-204ENST00000554659 OR2L8Q8NGY9 312 aa13.55□□□□□ -0.24
VTI1B-204ENST00000554659 TMEM80Q96HE8 168 aa13.55□□□□□ -0.24
VTI1B-204ENST00000554659 ZNF382Q96SR6 550 aa13.55□□□□□ -0.24
VTI1B-204ENST00000554659 RIOK2Q9BVS4 552 aaKnown RBP13.55□□□□□ -0.24
VTI1B-204ENST00000554659 CD244Q9BZW8 370 aa13.55□□□□□ -0.24
VTI1B-204ENST00000554659 RNF39Q9H2S5 420 aa13.55□□□□□ -0.24
VTI1B-204ENST00000554659 MMP27Q9H306 513 aa13.55□□□□□ -0.24
VTI1B-204ENST00000554659 TRPV4Q9HBA0 871 aa13.55□□□□□ -0.24
VTI1B-204ENST00000554659 FBRSL1Q9HCM7 1045 aaKnown RBP13.55□□□□□ -0.24
VTI1B-204ENST00000554659 RDH8Q9NYR8 311 aa13.55□□□□□ -0.24
VTI1B-204ENST00000554659 FMN2Q9NZ56 1722 aa13.55□□□□□ -0.24
VTI1B-204ENST00000554659 KDELR3O43731 214 aa13.55□□□□□ -0.24
VTI1B-204ENST00000554659 MAB21L1Q13394 359 aa13.55□□□□□ -0.24
VTI1B-204ENST00000554659 CMPK2Q5EBM0 449 aa13.55□□□□□ -0.24
VTI1B-204ENST00000554659 LRRC73Q5JTD7 316 aa13.55□□□□□ -0.24
VTI1B-204ENST00000554659 TCEAL6Q6IPX3 200 aa13.55□□□□□ -0.24
VTI1B-204ENST00000554659 DENND6BQ8NEG7 585 aa13.55□□□□□ -0.24
VTI1B-204ENST00000554659 METTL21AQ8WXB1 218 aa13.55□□□□□ -0.24
VTI1B-204ENST00000554659 SLC22A18Q96BI1 424 aa13.55□□□□□ -0.24
VTI1B-204ENST00000554659 DHRS1Q96LJ7 313 aa13.55□□□□□ -0.24
VTI1B-204ENST00000554659 SMOQ99835 787 aa13.55□□□□□ -0.24
VTI1B-204ENST00000554659 SEZ6LQ9BYH1 1024 aa13.55□□□□□ -0.24
VTI1B-204ENST00000554659 RNF38Q9H0F5 515 aa13.55□□□□□ -0.24
VTI1B-204ENST00000554659 TMEM168Q9H0V1 697 aa13.55□□□□□ -0.24
VTI1B-204ENST00000554659 TLE6Q9H808 572 aa13.55□□□□□ -0.24
VTI1B-204ENST00000554659 KCTD3Q9Y597 815 aa13.55□□□□□ -0.24
VTI1B-204ENST00000554659 PARP4Q9UKK3 1724 aaKnown RBP13.55□□□□□ -0.24
VTI1B-204ENST00000554659 PRKCGP05129 697 aa13.55□□□□□ -0.24
VTI1B-204ENST00000554659 KLK1P06870 262 aa13.55□□□□□ -0.24
VTI1B-204ENST00000554659 GNAO1P09471 354 aa13.55□□□□□ -0.24
VTI1B-204ENST00000554659 PABPC4LP0CB38 370 aaKnown RBP13.55□□□□□ -0.24
VTI1B-204ENST00000554659 CHRM1P11229 460 aaPredicted RBP13.55□□□□□ -0.24
VTI1B-204ENST00000554659 IL12BP29460 328 aa13.55□□□□□ -0.24
VTI1B-204ENST00000554659 ENTPD1P49961 510 aa13.55□□□□□ -0.24
VTI1B-204ENST00000554659 BPIFB1Q8TDL5 484 aa13.55□□□□□ -0.24
VTI1B-204ENST00000554659 TSGA13Q96PP4 275 aa13.55□□□□□ -0.24
VTI1B-204ENST00000554659 ALPK1Q96QP1 1244 aa13.55□□□□□ -0.24
VTI1B-204ENST00000554659 B3GNT4Q9C0J1 378 aa13.55□□□□□ -0.24
VTI1B-204ENST00000554659 CCSER2Q9H7U1 834 aa13.55□□□□□ -0.24
VTI1B-204ENST00000554659 ZNF69Q9UC07 566 aa13.55□□□□□ -0.24
VTI1B-204ENST00000554659 DLG5Q8TDM6 1919 aa13.55□□□□□ -0.24
VTI1B-204ENST00000554659 ISPDA4D126 451 aa13.55□□□□□ -0.24
VTI1B-204ENST00000554659 NRP1O14786 923 aa13.55□□□□□ -0.24
VTI1B-204ENST00000554659 PRAMEF11O60813 436 aa13.55□□□□□ -0.24
VTI1B-204ENST00000554659 ARL6IP5O75915 188 aa13.55□□□□□ -0.24
VTI1B-204ENST00000554659 RCBTB2O95199 551 aa13.55□□□□□ -0.24
VTI1B-204ENST00000554659 C8AP07357 584 aa13.55□□□□□ -0.24
VTI1B-204ENST00000554659 NPR2P20594 1047 aa13.55□□□□□ -0.24
VTI1B-204ENST00000554659 ZNF45Q02386 682 aa13.55□□□□□ -0.24
VTI1B-204ENST00000554659 FAM182AQ5T1J6 154 aa13.55□□□□□ -0.24
VTI1B-204ENST00000554659 NANOGP8Q6NSW7 305 aa13.55□□□□□ -0.24
VTI1B-204ENST00000554659 DENND1AQ8TEH3 1009 aa13.55□□□□□ -0.24
VTI1B-204ENST00000554659 ACOT12Q8WYK0 555 aa13.55□□□□□ -0.24
VTI1B-204ENST00000554659 VRTNQ9H8Y1 702 aa13.55□□□□□ -0.24
VTI1B-204ENST00000554659 NANOGQ9H9S0 305 aa13.55□□□□□ -0.24
VTI1B-204ENST00000554659 MEAF6Q9HAF1 191 aa13.55□□□□□ -0.24
VTI1B-204ENST00000554659 ADAP2Q9NPF8 381 aa13.55□□□□□ -0.24
VTI1B-204ENST00000554659 CMAHPQ9Y471 501 aa13.55□□□□□ -0.24
VTI1B-204ENST00000554659 CDRT1O95170 752 aa13.54□□□□□ -0.24
VTI1B-204ENST00000554659 ZNF30P17039 623 aa13.54□□□□□ -0.24
VTI1B-204ENST00000554659 PRKACGP22612 351 aa13.54□□□□□ -0.24
VTI1B-204ENST00000554659 AHCYP23526 432 aa13.54□□□□□ -0.24
VTI1B-204ENST00000554659 ABCA11PQ4W5N1 156 aa13.54□□□□□ -0.24
VTI1B-204ENST00000554659 MS4A13Q5J8X5 152 aa13.54□□□□□ -0.24
VTI1B-204ENST00000554659 ATAT1Q5SQI0 421 aa13.54□□□□□ -0.24
VTI1B-204ENST00000554659 RPS27LQ71UM5 84 aaKnown RBP13.54□□□□□ -0.24
VTI1B-204ENST00000554659 MCEMP1Q8IX19 187 aa13.54□□□□□ -0.24
VTI1B-204ENST00000554659 FAM46DQ8NEK8 389 aa13.54□□□□□ -0.24
VTI1B-204ENST00000554659 ZNF696Q9H7X3 374 aa13.54□□□□□ -0.24
VTI1B-204ENST00000554659 IL36AQ9UHA7 158 aa13.54□□□□□ -0.24
VTI1B-204ENST00000554659 ADAMTS6Q9UKP5 1117 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms