RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 PPA2Q9H2U2 334 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 MMP27Q9H306 513 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 PIGUQ9H490 435 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 GOLPH3Q9H4A6 298 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 TLE6Q9H808 572 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 LRRC40Q9H9A6 602 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 MCCC2Q9HCC0 563 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 OLFML3Q9NRN5 406 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 RGS18Q9NS28 235 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 RXFP3Q9NSD7 469 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 CCM2LQ9NUG4 571 aaPredicted RBP4.29□□□□□ -1.72
ATXN3-227ENST00000554491 DNAJC17Q9NVM6 304 aaKnown RBP4.29□□□□□ -1.72
ATXN3-227ENST00000554491 INTS13Q9NVM9 706 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 ADPRHL2Q9NX46 363 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 THUMPD1Q9NXG2 353 aaKnown RBP4.29□□□□□ -1.72
ATXN3-227ENST00000554491 TAS2R1Q9NYW7 299 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 GDE1Q9NZC3 331 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 COPG2Q9UBF2 871 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 DBNLQ9UJU6 430 aaKnown RBP4.29□□□□□ -1.72
ATXN3-227ENST00000554491 NFU1Q9UMS0 254 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 GDAQ9Y2T3 454 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 PPIL1Q9Y3C6 166 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 MFHAS1Q9Y4C4 1052 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 MICAL3Q7RTP6 2002 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 FANCMQ8IYD8 2048 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 MYH1P12882 1939 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 OTOGLQ3ZCN5 2332 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 ZFYVE26Q68DK2 2539 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 PRAMEF33A0A0G2JMD5 474 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 A0A0U1RQV5 110 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 XKRY2A2RUG3 117 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 RRN3P2A6NIE6 340 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 A8MUI8 341 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 A8MXQ7 604 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 CLDN4O14493 209 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 DCLK1O15075 740 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 PMM2O15305 246 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 NUPL2O15504 423 aaKnown RBP4.28□□□□□ -1.72
ATXN3-227ENST00000554491 B4GAT1O43505 415 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 ITM2AO43736 263 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 HS6ST1O60243 411 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 GPRIN2O60269 458 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 PRAMEF10O60809 474 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 TADA2AO75478 443 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 RFPL1O75677 317 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 TMEM63AO94886 807 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 HAUS5O94927 633 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 OTCP00480 354 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 TFAP2AP05549 437 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 CNPP09543 421 aaKnown RBP4.28□□□□□ -1.72
ATXN3-227ENST00000554491 OR4E1P0C645 316 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 SAGP10523 405 aaPredicted RBP4.28□□□□□ -1.72
ATXN3-227ENST00000554491 AKR1A1P14550 325 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 CDH2P19022 906 aaPredicted RBP4.28□□□□□ -1.72
ATXN3-227ENST00000554491 TCN1P20061 433 aaPredicted RBP4.28□□□□□ -1.72
ATXN3-227ENST00000554491 WARSP23381 471 aaKnown RBP4.28□□□□□ -1.72
ATXN3-227ENST00000554491 CMA1P23946 247 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 ITPKBP27987 946 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 CST5P28325 142 aaPredicted RBP4.28□□□□□ -1.72
ATXN3-227ENST00000554491 UGT2B10P36537 528 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 CD79BP40259 229 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 ARCN1P48444 511 aaKnown RBP4.28□□□□□ -1.72
ATXN3-227ENST00000554491 DHPSP49366 369 aaPredicted RBP4.28□□□□□ -1.72
ATXN3-227ENST00000554491 NT5C2P49902 561 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 ERFP50548 548 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 TPMTP51580 245 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 DGKQP52824 942 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 CAPZA1P52907 286 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 GBX2P52951 348 aaPredicted RBP4.28□□□□□ -1.72
ATXN3-227ENST00000554491 DRG2P55039 364 aaKnown RBP4.28□□□□□ -1.72
ATXN3-227ENST00000554491 CCL23P55773 120 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 TPTEP56180 551 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 YBEYP58557 167 aaPredicted RBP4.28□□□□□ -1.72
ATXN3-227ENST00000554491 TAS2R60P59551 318 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 BNC1Q01954 994 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 PPARDQ03181 441 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 ART3Q13508 389 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 CAMK2DQ13557 499 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 TFDP1Q14186 410 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 PON3Q15166 354 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 NAB2Q15742 525 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 PDSS1Q5T2R2 415 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 ANKRD40Q6AI12 368 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 NANOGP8Q6NSW7 305 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 DARS2Q6PI48 645 aaKnown RBP4.28□□□□□ -1.72
ATXN3-227ENST00000554491 BHLHB9Q6PI77 547 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 CYP20A1Q6UW02 462 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 LAYNQ6UX15 382 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 SLC36A4Q6YBV0 504 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 LINC00299Q6ZSB3 139 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 ADGRG6Q86SQ4 1221 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 KBTBD6Q86V97 674 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 HERC6Q8IVU3 1022 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 TIGD4Q8IY51 512 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 C9orf106Q8NAJ2 232 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 FANCBQ8NB91 859 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 KLHDC9Q8NEP7 349 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 SPATA4Q8NEY3 305 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 OR5T1Q8NG75 326 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 OR5T2Q8NGG2 359 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms