RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 DNAAF2Q9NVR5 837 aaKnown RBP7.34□□□□□ -1.23
TDP1-209ENST00000554180 SIRT5Q9NXA8 310 aa7.34□□□□□ -1.23
TDP1-209ENST00000554180 NOP53Q9NZM5 478 aaKnown RBP7.34□□□□□ -1.23
TDP1-209ENST00000554180 LRIT1Q9P2V4 623 aa7.34□□□□□ -1.23
TDP1-209ENST00000554180 VPS29Q9UBQ0 182 aa7.34□□□□□ -1.23
TDP1-209ENST00000554180 GMEB2Q9UKD1 530 aa7.34□□□□□ -1.23
TDP1-209ENST00000554180 PADI4Q9UM07 663 aa7.34□□□□□ -1.23
TDP1-209ENST00000554180 PCDHGA4Q9Y5G9 962 aa7.34□□□□□ -1.23
TDP1-209ENST00000554180 COPG1Q9Y678 874 aaKnown RBP7.34□□□□□ -1.23
TDP1-209ENST00000554180 AP1M2Q9Y6Q5 423 aa7.34□□□□□ -1.23
TDP1-209ENST00000554180 RNF215Q9Y6U7 377 aa7.34□□□□□ -1.23
TDP1-209ENST00000554180 CAPN7Q9Y6W3 813 aa7.34□□□□□ -1.23
TDP1-209ENST00000554180 OTOGLQ3ZCN5 2332 aa7.34□□□□□ -1.23
TDP1-209ENST00000554180 TP53BP1Q12888 1972 aaPredicted RBP7.33□□□□□ -1.24
TDP1-209ENST00000554180 MN1Q10571 1320 aaPredicted RBP7.33□□□□□ -1.24
TDP1-209ENST00000554180 IGHV1OR21-1A0A087WYE8 117 aa7.33□□□□□ -1.24
TDP1-209ENST00000554180 LY6G6EA0A0G2JKS1 128 aa7.33□□□□□ -1.24
TDP1-209ENST00000554180 LNP1A1A4G5 178 aa7.33□□□□□ -1.24
TDP1-209ENST00000554180 EME2A4GXA9 379 aaPredicted RBP7.33□□□□□ -1.24
TDP1-209ENST00000554180 TLCD2A6NGC4 264 aa7.33□□□□□ -1.24
TDP1-209ENST00000554180 CAPN14A8MX76 684 aa7.33□□□□□ -1.24
TDP1-209ENST00000554180 MAGEB17A8MXT2 336 aa7.33□□□□□ -1.24
TDP1-209ENST00000554180 TRIM38O00635 465 aa7.33□□□□□ -1.24
TDP1-209ENST00000554180 HAT1O14929 419 aa7.33□□□□□ -1.24
TDP1-209ENST00000554180 TOX3O15405 576 aaPredicted RBP7.33□□□□□ -1.24
TDP1-209ENST00000554180 SIGLEC6O43699 453 aa7.33□□□□□ -1.24
TDP1-209ENST00000554180 OR1F1O43749 312 aa7.33□□□□□ -1.24
TDP1-209ENST00000554180 PEX11AO75192 247 aa7.33□□□□□ -1.24
TDP1-209ENST00000554180 SEC22BO75396 215 aa7.33□□□□□ -1.24
TDP1-209ENST00000554180 ATP5HO75947 161 aa7.33□□□□□ -1.24
TDP1-209ENST00000554180 KIAA0754O94854 1291 aa7.33□□□□□ -1.24
TDP1-209ENST00000554180 C9P02748 559 aa7.33□□□□□ -1.24
TDP1-209ENST00000554180 ALDOCP09972 364 aaKnown RBP7.33□□□□□ -1.24
TDP1-209ENST00000554180 ZNF806P0C7X5 589 aa7.33□□□□□ -1.24
TDP1-209ENST00000554180 PRPS2P11908 318 aa7.33□□□□□ -1.24
TDP1-209ENST00000554180 CKMT1AP12532 417 aa7.33□□□□□ -1.24
TDP1-209ENST00000554180 MAGP20916 626 aa7.33□□□□□ -1.24
TDP1-209ENST00000554180 BCL6P41182 706 aa7.33□□□□□ -1.24
TDP1-209ENST00000554180 TSFMP43897 325 aaKnown RBP7.33□□□□□ -1.24
TDP1-209ENST00000554180 DUSP3P51452 185 aaPredicted RBP7.33□□□□□ -1.24
TDP1-209ENST00000554180 RPL38P63173 70 aaKnown RBP7.33□□□□□ -1.24
TDP1-209ENST00000554180 YBX1P67809 324 aaKnown RBP7.33□□□□□ -1.24
TDP1-209ENST00000554180 HMGCS1Q01581 520 aa7.33□□□□□ -1.24
TDP1-209ENST00000554180 MEF2AQ02078 507 aaPredicted RBP7.33□□□□□ -1.24
TDP1-209ENST00000554180 ACSM2AQ08AH3 577 aa7.33□□□□□ -1.24
TDP1-209ENST00000554180 SLC14A1Q13336 389 aa7.33□□□□□ -1.24
TDP1-209ENST00000554180 SQSTM1Q13501 440 aa7.33□□□□□ -1.24
TDP1-209ENST00000554180 PWP1Q13610 501 aa7.33□□□□□ -1.24
TDP1-209ENST00000554180 DDX39BQ13838 428 aaKnown RBP7.33□□□□□ -1.24
TDP1-209ENST00000554180 UBAP2LQ14157 1087 aaKnown RBP7.33□□□□□ -1.24
TDP1-209ENST00000554180 HERC3Q15034 1050 aa7.33□□□□□ -1.24
TDP1-209ENST00000554180 KIAA0040Q15053 153 aa7.33□□□□□ -1.24
TDP1-209ENST00000554180 RBBP5Q15291 538 aaKnown RBP7.33□□□□□ -1.24
TDP1-209ENST00000554180 MAPRE2Q15555 327 aa7.33□□□□□ -1.24
TDP1-209ENST00000554180 PROX2Q3B8N5 592 aa7.33□□□□□ -1.24
TDP1-209ENST00000554180 ADPRMQ3LIE5 342 aa7.33□□□□□ -1.24
TDP1-209ENST00000554180 GALNTL6Q49A17 601 aa7.33□□□□□ -1.24
TDP1-209ENST00000554180 PDCD4Q53EL6 469 aaKnown RBP7.33□□□□□ -1.24
TDP1-209ENST00000554180 TMEM35AQ53FP2 167 aa7.33□□□□□ -1.24
TDP1-209ENST00000554180 SGO1Q5FBB7 561 aa7.33□□□□□ -1.24
TDP1-209ENST00000554180 FAM219BQ5XKK7 198 aa7.33□□□□□ -1.24
TDP1-209ENST00000554180 TMEM198Q66K66 360 aa7.33□□□□□ -1.24
TDP1-209ENST00000554180 ACSM2BQ68CK6 577 aa7.33□□□□□ -1.24
TDP1-209ENST00000554180 FOXR1Q6PIV2 292 aa7.33□□□□□ -1.24
TDP1-209ENST00000554180 FIGLAQ6QHK4 219 aa7.33□□□□□ -1.24
TDP1-209ENST00000554180 WDR74Q6RFH5 385 aaPredicted RBP7.33□□□□□ -1.24
TDP1-209ENST00000554180 SCIMPQ6UWF3 145 aa7.33□□□□□ -1.24
TDP1-209ENST00000554180 DBX2Q6ZNG2 339 aa7.33□□□□□ -1.24
TDP1-209ENST00000554180 RNF44Q7L0R7 432 aa7.33□□□□□ -1.24
TDP1-209ENST00000554180 VN1R5Q7Z5H4 357 aa7.33□□□□□ -1.24
TDP1-209ENST00000554180 SPRED1Q7Z699 444 aa7.33□□□□□ -1.24
TDP1-209ENST00000554180 PLXDC1Q8IUK5 500 aa7.33□□□□□ -1.24
TDP1-209ENST00000554180 MIER2Q8N344 545 aa7.33□□□□□ -1.24
TDP1-209ENST00000554180 C19orf47Q8N9M1 422 aaKnown RBP7.33□□□□□ -1.24
TDP1-209ENST00000554180 ANKRD53Q8N9V6 530 aa7.33□□□□□ -1.24
TDP1-209ENST00000554180 MFSD9Q8NBP5 474 aa7.33□□□□□ -1.24
TDP1-209ENST00000554180 ZNF740Q8NDX6 193 aa7.33□□□□□ -1.24
TDP1-209ENST00000554180 BAHD1Q8TBE0 780 aaPredicted RBP7.33□□□□□ -1.24
TDP1-209ENST00000554180 MTFMTQ96DP5 389 aaKnown RBP7.33□□□□□ -1.24
TDP1-209ENST00000554180 PRR11Q96HE9 360 aaPredicted RBP7.33□□□□□ -1.24
TDP1-209ENST00000554180 CATSPER2Q96P56 530 aa7.33□□□□□ -1.24
TDP1-209ENST00000554180 DPYSL5Q9BPU6 564 aa7.33□□□□□ -1.24
TDP1-209ENST00000554180 LRFN3Q9BTN0 628 aa7.33□□□□□ -1.24
TDP1-209ENST00000554180 CCDC106Q9BWC9 280 aa7.33□□□□□ -1.24
TDP1-209ENST00000554180 GTPBP2Q9BX10 602 aaKnown RBP7.33□□□□□ -1.24
TDP1-209ENST00000554180 MS4A8Q9BY19 250 aa7.33□□□□□ -1.24
TDP1-209ENST00000554180 ABCG4Q9H172 646 aa7.33□□□□□ -1.24
TDP1-209ENST00000554180 KCNH6Q9H252 994 aa7.33□□□□□ -1.24
TDP1-209ENST00000554180 SEMA6CQ9H3T2 930 aa7.33□□□□□ -1.24
TDP1-209ENST00000554180 FSCN3Q9NQT6 498 aa7.33□□□□□ -1.24
TDP1-209ENST00000554180 TXLNGQ9NUQ3 528 aa7.33□□□□□ -1.24
TDP1-209ENST00000554180 AIG1Q9NVV5 245 aa7.33□□□□□ -1.24
TDP1-209ENST00000554180 AHSPQ9NZD4 102 aa7.33□□□□□ -1.24
TDP1-209ENST00000554180 ZIM2Q9NZV7 527 aa7.33□□□□□ -1.24
TDP1-209ENST00000554180 SLC12A4Q9UP95 1085 aa7.33□□□□□ -1.24
TDP1-209ENST00000554180 EIF3LQ9Y262 564 aaKnown RBP7.33□□□□□ -1.24
TDP1-209ENST00000554180 RUVBL1Q9Y265 456 aaKnown RBP7.33□□□□□ -1.24
TDP1-209ENST00000554180 GPR45Q9Y5Y3 372 aa7.33□□□□□ -1.24
TDP1-209ENST00000554180 U3KQA8 63 aa7.33□□□□□ -1.24
TDP1-209ENST00000554180 TDRD6O60522 2096 aaKnown RBP7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms