RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 MRPL17Q9NRX2 175 aaKnown RBP4.59□□□□□ -1.67
SYNE2-210ENST00000553455 C2CD2Q9Y426 696 aa4.59□□□□□ -1.67
SYNE2-210ENST00000553455 PRSS44E7EML9 344 aa4.58□□□□□ -1.68
SYNE2-210ENST00000553455 KLF11O14901 512 aa4.58□□□□□ -1.68
SYNE2-210ENST00000553455 KRT33AO76009 404 aa4.58□□□□□ -1.68
SYNE2-210ENST00000553455 PATE4P0C8F1 98 aa4.58□□□□□ -1.68
SYNE2-210ENST00000553455 VCLP18206 1134 aa4.58□□□□□ -1.68
SYNE2-210ENST00000553455 SERPINB6P35237 376 aa4.58□□□□□ -1.68
SYNE2-210ENST00000553455 MAGEB1P43366 347 aa4.58□□□□□ -1.68
SYNE2-210ENST00000553455 CLDN17P56750 224 aa4.58□□□□□ -1.68
SYNE2-210ENST00000553455 ARHGAP1Q07960 439 aa4.58□□□□□ -1.68
SYNE2-210ENST00000553455 ACTN3Q08043 901 aaPredicted RBP4.58□□□□□ -1.68
SYNE2-210ENST00000553455 PRUNE1Q86TP1 453 aa4.58□□□□□ -1.68
SYNE2-210ENST00000553455 KLHDC8AQ8IYD2 350 aa4.58□□□□□ -1.68
SYNE2-210ENST00000553455 SFRP1Q8N474 314 aa4.58□□□□□ -1.68
SYNE2-210ENST00000553455 UBLCP1Q8WVY7 318 aaPredicted RBP4.58□□□□□ -1.68
SYNE2-210ENST00000553455 APOBEC4Q8WW27 367 aaKnown RBP4.58□□□□□ -1.68
SYNE2-210ENST00000553455 METTL21AQ8WXB1 218 aa4.58□□□□□ -1.68
SYNE2-210ENST00000553455 ZNF501Q96CX3 271 aaPredicted RBP4.58□□□□□ -1.68
SYNE2-210ENST00000553455 PRAC1Q96KF2 57 aa4.58□□□□□ -1.68
SYNE2-210ENST00000553455 BTBD9Q96Q07 612 aa4.58□□□□□ -1.68
SYNE2-210ENST00000553455 ZNF559Q9BR84 538 aa4.58□□□□□ -1.68
SYNE2-210ENST00000553455 ALKBH7Q9BT30 221 aaPredicted RBP4.58□□□□□ -1.68
SYNE2-210ENST00000553455 ACPTQ9BZG2 426 aa4.58□□□□□ -1.68
SYNE2-210ENST00000553455 C5orf66Q9H5L9 145 aa4.58□□□□□ -1.68
SYNE2-210ENST00000553455 RNPEPL1Q9HAU8 725 aa4.58□□□□□ -1.68
SYNE2-210ENST00000553455 MID1IP1Q9NPA3 183 aa4.58□□□□□ -1.68
SYNE2-210ENST00000553455 C19orf25Q9UFG5 118 aaPredicted RBP4.58□□□□□ -1.68
SYNE2-210ENST00000553455 GMEB2Q9UKD1 530 aa4.58□□□□□ -1.68
SYNE2-210ENST00000553455 AGTPBP1Q9UPW5 1226 aa4.58□□□□□ -1.68
SYNE2-210ENST00000553455 ARID2Q68CP9 1835 aa4.58□□□□□ -1.68
SYNE2-210ENST00000553455 C13orf42A0A1B0GVH6 325 aa4.57□□□□□ -1.68
SYNE2-210ENST00000553455 ANTXRLA6NF34 631 aa4.57□□□□□ -1.68
SYNE2-210ENST00000553455 EPHB6O15197 1021 aa4.57□□□□□ -1.68
SYNE2-210ENST00000553455 PCDH7O60245 1069 aa4.57□□□□□ -1.68
SYNE2-210ENST00000553455 ACSL4O60488 711 aa4.57□□□□□ -1.68
SYNE2-210ENST00000553455 ATP9AO75110 1047 aa4.57□□□□□ -1.68
SYNE2-210ENST00000553455 KHDRBS3O75525 346 aaKnown RBP4.57□□□□□ -1.68
SYNE2-210ENST00000553455 CDC123O75794 336 aaPredicted RBP4.57□□□□□ -1.68
SYNE2-210ENST00000553455 AKAP3O75969 853 aa4.57□□□□□ -1.68
SYNE2-210ENST00000553455 AP2A2O94973 939 aa4.57□□□□□ -1.68
SYNE2-210ENST00000553455 BAG2O95816 211 aa4.57□□□□□ -1.68
SYNE2-210ENST00000553455 EML2O95834 649 aa4.57□□□□□ -1.68
SYNE2-210ENST00000553455 PAK4O96013 591 aaPredicted RBP4.57□□□□□ -1.68
SYNE2-210ENST00000553455 CETN2P41208 172 aa4.57□□□□□ -1.68
SYNE2-210ENST00000553455 LBX1P52954 281 aa4.57□□□□□ -1.68
SYNE2-210ENST00000553455 NME5P56597 212 aa4.57□□□□□ -1.68
SYNE2-210ENST00000553455 OR1D5P58170 312 aa4.57□□□□□ -1.68
SYNE2-210ENST00000553455 MYL7Q01449 175 aa4.57□□□□□ -1.68
SYNE2-210ENST00000553455 AKAP17AQ02040 695 aaKnown RBP4.57□□□□□ -1.68
SYNE2-210ENST00000553455 UBXN1Q04323 297 aa4.57□□□□□ -1.68
SYNE2-210ENST00000553455 TRIM29Q14134 588 aa4.57□□□□□ -1.68
SYNE2-210ENST00000553455 FUT11Q495W5 492 aa4.57□□□□□ -1.68
SYNE2-210ENST00000553455 PM20D1Q6GTS8 502 aa4.57□□□□□ -1.68
SYNE2-210ENST00000553455 ZNF790Q6PG37 636 aa4.57□□□□□ -1.68
SYNE2-210ENST00000553455 SLC25A47Q6Q0C1 308 aa4.57□□□□□ -1.68
SYNE2-210ENST00000553455 LEKR1Q6ZMV7 388 aa4.57□□□□□ -1.68
SYNE2-210ENST00000553455 RAPH1Q70E73 1250 aa4.57□□□□□ -1.68
SYNE2-210ENST00000553455 BTN2A1Q7KYR7 527 aa4.57□□□□□ -1.68
SYNE2-210ENST00000553455 PRSS35Q8N3Z0 413 aa4.57□□□□□ -1.68
SYNE2-210ENST00000553455 EPSTI1Q96J88 318 aa4.57□□□□□ -1.68
SYNE2-210ENST00000553455 PRMT1Q99873 361 aaKnown RBP4.57□□□□□ -1.68
SYNE2-210ENST00000553455 SLC39A8Q9C0K1 460 aa4.57□□□□□ -1.68
SYNE2-210ENST00000553455 EGLN3Q9H6Z9 239 aa4.57□□□□□ -1.68
SYNE2-210ENST00000553455 C10orf88Q9H8K7 445 aa4.57□□□□□ -1.68
SYNE2-210ENST00000553455 RNF121Q9H920 327 aa4.57□□□□□ -1.68
SYNE2-210ENST00000553455 GPR173Q9NS66 373 aa4.57□□□□□ -1.68
SYNE2-210ENST00000553455 PFASO15067 1338 aa4.56□□□□□ -1.68
SYNE2-210ENST00000553455 A0A087WUV0 522 aaPredicted RBP4.56□□□□□ -1.68
SYNE2-210ENST00000553455 ANKDD1BA6NHY2 528 aa4.56□□□□□ -1.68
SYNE2-210ENST00000553455 E5RGE8 158 aa4.56□□□□□ -1.68
SYNE2-210ENST00000553455 FAM72CH0Y354 149 aa4.56□□□□□ -1.68
SYNE2-210ENST00000553455 TEX28O15482 410 aa4.56□□□□□ -1.68
SYNE2-210ENST00000553455 EXTL3O43909 919 aa4.56□□□□□ -1.68
SYNE2-210ENST00000553455 SEC24AO95486 1093 aa4.56□□□□□ -1.68
SYNE2-210ENST00000553455 YES1P07947 543 aa4.56□□□□□ -1.68
SYNE2-210ENST00000553455 GOT1P17174 413 aa4.56□□□□□ -1.68
SYNE2-210ENST00000553455 ANOS1P23352 680 aa4.56□□□□□ -1.68
SYNE2-210ENST00000553455 RBMS1P29558 406 aaKnown RBP4.56□□□□□ -1.68
SYNE2-210ENST00000553455 MAP2K2P36507 400 aa4.56□□□□□ -1.68
SYNE2-210ENST00000553455 KIAA1024LP59773 190 aa4.56□□□□□ -1.68
SYNE2-210ENST00000553455 AP1B1Q10567 949 aa4.56□□□□□ -1.68
SYNE2-210ENST00000553455 ZNF74Q16587 644 aa4.56□□□□□ -1.68
SYNE2-210ENST00000553455 C2orf76Q3KRA6 126 aa4.56□□□□□ -1.68
SYNE2-210ENST00000553455 AARDQ4LEZ3 155 aa4.56□□□□□ -1.68
SYNE2-210ENST00000553455 FAM72AQ5TYM5 149 aa4.56□□□□□ -1.68
SYNE2-210ENST00000553455 PRAMEF8Q5VWM4 474 aa4.56□□□□□ -1.68
SYNE2-210ENST00000553455 ARHGAP17Q68EM7 881 aa4.56□□□□□ -1.68
SYNE2-210ENST00000553455 FAM72DQ6L9T8 149 aa4.56□□□□□ -1.68
SYNE2-210ENST00000553455 SLC24A5Q71RS6 500 aa4.56□□□□□ -1.68
SYNE2-210ENST00000553455 C5orf24Q7Z6I8 188 aa4.56□□□□□ -1.68
SYNE2-210ENST00000553455 FAM72BQ86X60 149 aa4.56□□□□□ -1.68
SYNE2-210ENST00000553455 GBP7Q8N8V2 638 aaPredicted RBP4.56□□□□□ -1.68
SYNE2-210ENST00000553455 OR4C15Q8NGM1 316 aa4.56□□□□□ -1.68
SYNE2-210ENST00000553455 UBE2Q2Q8WVN8 375 aa4.56□□□□□ -1.68
SYNE2-210ENST00000553455 AP2M1Q96CW1 435 aa4.56□□□□□ -1.68
SYNE2-210ENST00000553455 LPAR4Q99677 370 aa4.56□□□□□ -1.68
SYNE2-210ENST00000553455 OSBPL8Q9BZF1 889 aa4.56□□□□□ -1.68
SYNE2-210ENST00000553455 PPANQ9NQ55 473 aaKnown RBP4.56□□□□□ -1.68
SYNE2-210ENST00000553455 MAN2C1Q9NTJ4 1040 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms