RNA–Protein interactions for RNA: ENST00000552448.1

TUBA1C-209, Transcript of tubulin alpha 1c, humanhuman

TSL 3

Gene TUBA1C, Length 1,800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1C-209ENST00000552448 TSPAN12O95859 305 aa10.68□□□□□ -0.7
TUBA1C-209ENST00000552448 MSL3P1P0C860 447 aa10.68□□□□□ -0.7
TUBA1C-209ENST00000552448 DBTP11182 482 aaKnown RBP10.68□□□□□ -0.7
TUBA1C-209ENST00000552448 PKMP14618 531 aaKnown RBP10.68□□□□□ -0.7
TUBA1C-209ENST00000552448 CD72P21854 359 aa10.68□□□□□ -0.7
TUBA1C-209ENST00000552448 HLA-DMAP28067 261 aa10.68□□□□□ -0.7
TUBA1C-209ENST00000552448 GABRR2P28476 465 aa10.68□□□□□ -0.7
TUBA1C-209ENST00000552448 FMO3P31513 532 aa10.68□□□□□ -0.7
TUBA1C-209ENST00000552448 ETV3P41162 512 aa10.68□□□□□ -0.7
TUBA1C-209ENST00000552448 HTR2BP41595 481 aa10.68□□□□□ -0.7
TUBA1C-209ENST00000552448 NRIP1P48552 1158 aa10.68□□□□□ -0.7
TUBA1C-209ENST00000552448 UFM1P61960 85 aa10.68□□□□□ -0.7
TUBA1C-209ENST00000552448 YBX1P67809 324 aaKnown RBP10.68□□□□□ -0.7
TUBA1C-209ENST00000552448 CYP4F8P98187 520 aa10.68□□□□□ -0.7
TUBA1C-209ENST00000552448 CDH18Q13634 790 aa10.68□□□□□ -0.7
TUBA1C-209ENST00000552448 PFKFB4Q16877 469 aa10.68□□□□□ -0.7
TUBA1C-209ENST00000552448 AAK1Q2M2I8 961 aa10.68□□□□□ -0.7
TUBA1C-209ENST00000552448 CTSL3PQ5NE16 218 aa10.68□□□□□ -0.7
TUBA1C-209ENST00000552448 GPR149Q86SP6 731 aa10.68□□□□□ -0.7
TUBA1C-209ENST00000552448 SYVN1Q86TM6 617 aa10.68□□□□□ -0.7
TUBA1C-209ENST00000552448 RAVER1Q8IY67 606 aaKnown RBP10.68□□□□□ -0.7
TUBA1C-209ENST00000552448 SLC38A6Q8IZM9 456 aa10.68□□□□□ -0.7
TUBA1C-209ENST00000552448 APCDD1Q8J025 514 aa10.68□□□□□ -0.7
TUBA1C-209ENST00000552448 KREMEN2Q8NCW0 462 aa10.68□□□□□ -0.7
TUBA1C-209ENST00000552448 STAG3L4Q8TBR4 150 aa10.68□□□□□ -0.7
TUBA1C-209ENST00000552448 SLC7A6Q92536 515 aa10.68□□□□□ -0.7
TUBA1C-209ENST00000552448 MRPS31Q92665 395 aaKnown RBP10.68□□□□□ -0.7
TUBA1C-209ENST00000552448 EID2BQ96D98 161 aa10.68□□□□□ -0.7
TUBA1C-209ENST00000552448 PITX2Q99697 317 aa10.68□□□□□ -0.7
TUBA1C-209ENST00000552448 SLC22A4Q9H015 551 aa10.68□□□□□ -0.7
TUBA1C-209ENST00000552448 DCAF13Q9NV06 445 aaKnown RBP10.68□□□□□ -0.7
TUBA1C-209ENST00000552448 B3GNT2Q9NY97 397 aa10.68□□□□□ -0.7
TUBA1C-209ENST00000552448 IL17CQ9P0M4 197 aa10.68□□□□□ -0.7
TUBA1C-209ENST00000552448 DPP7Q9UHL4 492 aa10.68□□□□□ -0.7
TUBA1C-209ENST00000552448 HELZP42694 1942 aaKnown RBP10.68□□□□□ -0.7
TUBA1C-209ENST00000552448 CXCR6O00574 342 aa10.68□□□□□ -0.7
TUBA1C-209ENST00000552448 NRG2O14511 850 aaPredicted RBP10.68□□□□□ -0.7
TUBA1C-209ENST00000552448 STX16O14662 325 aa10.68□□□□□ -0.7
TUBA1C-209ENST00000552448 DSCR3O14972 297 aa10.68□□□□□ -0.7
TUBA1C-209ENST00000552448 SMAD6O43541 496 aaKnown RBP10.68□□□□□ -0.7
TUBA1C-209ENST00000552448 TMCC2O75069 709 aa10.68□□□□□ -0.7
TUBA1C-209ENST00000552448 NIPSNAP2O75323 286 aa10.68□□□□□ -0.7
TUBA1C-209ENST00000552448 ALPPP05187 535 aa10.68□□□□□ -0.7
TUBA1C-209ENST00000552448 C8AP07357 584 aa10.68□□□□□ -0.7
TUBA1C-209ENST00000552448 DDX6P26196 483 aaKnown RBP eCLIP10.68□□□□□ -0.72e-18■■■□□ 15
TUBA1C-209ENST00000552448 HOXA9P31269 272 aa10.68□□□□□ -0.7
TUBA1C-209ENST00000552448 CLCN4P51793 760 aa10.68□□□□□ -0.7
TUBA1C-209ENST00000552448 AP1S1P61966 158 aa10.68□□□□□ -0.7
TUBA1C-209ENST00000552448 SLC7A9P82251 487 aa10.68□□□□□ -0.7
TUBA1C-209ENST00000552448 TNK1Q13470 666 aa10.68□□□□□ -0.7
TUBA1C-209ENST00000552448 TSNQ15631 228 aaKnown RBP10.68□□□□□ -0.7
TUBA1C-209ENST00000552448 TIGD6Q17RP2 521 aa10.68□□□□□ -0.7
TUBA1C-209ENST00000552448 BCL7AQ4VC05 210 aa10.68□□□□□ -0.7
TUBA1C-209ENST00000552448 ZRANB3Q5FWF4 1079 aa10.68□□□□□ -0.7
TUBA1C-209ENST00000552448 KIAA1614Q5VZ46 1190 aa10.68□□□□□ -0.7
TUBA1C-209ENST00000552448 HTR3DQ70Z44 454 aa10.68□□□□□ -0.7
TUBA1C-209ENST00000552448 TMC8Q8IU68 726 aa10.68□□□□□ -0.7
TUBA1C-209ENST00000552448 HS6ST3Q8IZP7 471 aa10.68□□□□□ -0.7
TUBA1C-209ENST00000552448 CADM2Q8N3J6 435 aa10.68□□□□□ -0.7
TUBA1C-209ENST00000552448 NKAPQ8N5F7 415 aaKnown RBP10.68□□□□□ -0.7
TUBA1C-209ENST00000552448 ZNF548Q8NEK5 533 aaPredicted RBP10.68□□□□□ -0.7
TUBA1C-209ENST00000552448 OR5H6Q8NGV6 325 aa10.68□□□□□ -0.7
TUBA1C-209ENST00000552448 FBXO30Q8TB52 745 aa10.68□□□□□ -0.7
TUBA1C-209ENST00000552448 FRS2Q8WU20 508 aa10.68□□□□□ -0.7
TUBA1C-209ENST00000552448 PIH1D2Q8WWB5 315 aa10.68□□□□□ -0.7
TUBA1C-209ENST00000552448 FUBP1Q96AE4 644 aaKnown RBP10.68□□□□□ -0.7
TUBA1C-209ENST00000552448 RPL10LQ96L21 214 aaKnown RBP10.68□□□□□ -0.7
TUBA1C-209ENST00000552448 NSUN5Q96P11 429 aaKnown RBP10.68□□□□□ -0.7
TUBA1C-209ENST00000552448 OR2A14Q96R47 310 aa10.68□□□□□ -0.7
TUBA1C-209ENST00000552448 ZBTB18Q99592 522 aa10.68□□□□□ -0.7
TUBA1C-209ENST00000552448 C2orf49Q9BVC5 232 aaPredicted RBP10.68□□□□□ -0.7
TUBA1C-209ENST00000552448 TMEM245Q9H330 911 aa10.68□□□□□ -0.7
TUBA1C-209ENST00000552448 ZNF556Q9HAH1 456 aa10.68□□□□□ -0.7
TUBA1C-209ENST00000552448 RNF112Q9ULX5 631 aa10.68□□□□□ -0.7
TUBA1C-209ENST00000552448 SNX7Q9UNH6 387 aa10.68□□□□□ -0.7
TUBA1C-209ENST00000552448 USP22Q9UPT9 525 aa10.68□□□□□ -0.7
TUBA1C-209ENST00000552448 GPSM3Q9Y4H4 160 aa10.68□□□□□ -0.7
TUBA1C-209ENST00000552448 LINC01553A4QN01 128 aa10.67□□□□□ -0.7
TUBA1C-209ENST00000552448 CDC7O00311 574 aa10.67□□□□□ -0.7
TUBA1C-209ENST00000552448 ZNF780AO75290 641 aaPredicted RBP10.67□□□□□ -0.7
TUBA1C-209ENST00000552448 VPS26AO75436 327 aa10.67□□□□□ -0.7
TUBA1C-209ENST00000552448 ECI2O75521 394 aa10.67□□□□□ -0.7
TUBA1C-209ENST00000552448 TSPAN9O75954 239 aa10.67□□□□□ -0.7
TUBA1C-209ENST00000552448 PDE9AO76083 593 aa10.67□□□□□ -0.7
TUBA1C-209ENST00000552448 CKMP06732 381 aa10.67□□□□□ -0.7
TUBA1C-209ENST00000552448 NCF1P14598 390 aaPredicted RBP10.67□□□□□ -0.7
TUBA1C-209ENST00000552448 PCSK2P16519 638 aa10.67□□□□□ -0.7
TUBA1C-209ENST00000552448 HMGCLP35914 325 aa10.67□□□□□ -0.7
TUBA1C-209ENST00000552448 MAGEA2P43356 314 aa10.67□□□□□ -0.7
TUBA1C-209ENST00000552448 EML3Q32P44 896 aa10.67□□□□□ -0.7
TUBA1C-209ENST00000552448 MPP7Q5T2T1 576 aa10.67□□□□□ -0.7
TUBA1C-209ENST00000552448 ARMC12Q5T9G4 340 aa10.67□□□□□ -0.7
TUBA1C-209ENST00000552448 ATG9BQ674R7 924 aa10.67□□□□□ -0.7
TUBA1C-209ENST00000552448 KDM4DQ6B0I6 523 aa10.67□□□□□ -0.7
TUBA1C-209ENST00000552448 RETSATQ6NUM9 610 aa10.67□□□□□ -0.7
TUBA1C-209ENST00000552448 ENPP6Q6UWR7 440 aa10.67□□□□□ -0.7
TUBA1C-209ENST00000552448 BBS7Q8IWZ6 715 aa10.67□□□□□ -0.7
TUBA1C-209ENST00000552448 CPXM2Q8N436 756 aa10.67□□□□□ -0.7
TUBA1C-209ENST00000552448 NAT16Q8N8M0 369 aa10.67□□□□□ -0.7
TUBA1C-209ENST00000552448 SIDT2Q8NBJ9 832 aaKnown RBP10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms