RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 OR1F1O43749 312 aa12.46□□□□□ -0.41
RAB5C-206ENST00000550406 BRINP1O60477 761 aa12.46□□□□□ -0.41
RAB5C-206ENST00000550406 SRPX2O60687 465 aaPredicted RBP12.46□□□□□ -0.41
RAB5C-206ENST00000550406 H2AFYO75367 372 aaKnown RBP12.46□□□□□ -0.41
RAB5C-206ENST00000550406 KATNA1O75449 491 aa12.46□□□□□ -0.41
RAB5C-206ENST00000550406 DXOO77932 396 aaKnown RBP12.46□□□□□ -0.41
RAB5C-206ENST00000550406 TBX6O95947 436 aaPredicted RBP12.46□□□□□ -0.41
RAB5C-206ENST00000550406 CAPNS1P04632 268 aa12.46□□□□□ -0.41
RAB5C-206ENST00000550406 SLC5A2P31639 672 aa12.46□□□□□ -0.41
RAB5C-206ENST00000550406 PIK3CGP48736 1102 aa12.46□□□□□ -0.41
RAB5C-206ENST00000550406 RPS15AP62244 130 aaKnown RBP12.46□□□□□ -0.41
RAB5C-206ENST00000550406 PRTGQ2VWP7 1150 aa12.46□□□□□ -0.41
RAB5C-206ENST00000550406 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.46□□□□□ -0.41
RAB5C-206ENST00000550406 WASHC2DQ5SRD0 308 aa12.46□□□□□ -0.41
RAB5C-206ENST00000550406 LIPJQ5W064 366 aa12.46□□□□□ -0.41
RAB5C-206ENST00000550406 GRHL2Q6ISB3 625 aa12.46□□□□□ -0.41
RAB5C-206ENST00000550406 LETMD1Q6P1Q0 360 aa12.46□□□□□ -0.41
RAB5C-206ENST00000550406 CEACAM20Q6UY09 585 aa12.46□□□□□ -0.41
RAB5C-206ENST00000550406 ZCCHC23Q6ZST2 131 aa12.46□□□□□ -0.41
RAB5C-206ENST00000550406 FRMD7Q6ZUT3 714 aa12.46□□□□□ -0.41
RAB5C-206ENST00000550406 BPHLQ86WA6 291 aaPredicted RBP12.46□□□□□ -0.41
RAB5C-206ENST00000550406 OR4F6Q8NGB9 312 aa12.46□□□□□ -0.41
RAB5C-206ENST00000550406 MDM1Q8TC05 714 aa12.46□□□□□ -0.41
RAB5C-206ENST00000550406 GATA6Q92908 595 aa12.46□□□□□ -0.41
RAB5C-206ENST00000550406 THAP11Q96EK4 314 aa12.46□□□□□ -0.41
RAB5C-206ENST00000550406 AIF1LQ9BQI0 150 aa12.46□□□□□ -0.41
RAB5C-206ENST00000550406 DDA1Q9BW61 102 aa12.46□□□□□ -0.41
RAB5C-206ENST00000550406 TMEM121BQ9BXQ6 578 aaPredicted RBP12.46□□□□□ -0.41
RAB5C-206ENST00000550406 AICDAQ9GZX7 198 aa12.46□□□□□ -0.41
RAB5C-206ENST00000550406 TNFRSF12AQ9NP84 129 aa12.46□□□□□ -0.41
RAB5C-206ENST00000550406 SEC16AO15027 2179 aa12.45□□□□□ -0.42
RAB5C-206ENST00000550406 FITM1A5D6W6 292 aa12.45□□□□□ -0.42
RAB5C-206ENST00000550406 H3BQF6 201 aa12.45□□□□□ -0.42
RAB5C-206ENST00000550406 NVLO15381 856 aaKnown RBP12.45□□□□□ -0.42
RAB5C-206ENST00000550406 BIRC5O15392 142 aa12.45□□□□□ -0.42
RAB5C-206ENST00000550406 UGDHO60701 494 aa12.45□□□□□ -0.42
RAB5C-206ENST00000550406 OR2B3O76000 313 aa12.45□□□□□ -0.42
RAB5C-206ENST00000550406 OR4F21O95013 312 aa12.45□□□□□ -0.42
RAB5C-206ENST00000550406 HPDP32754 393 aaPredicted RBP12.45□□□□□ -0.42
RAB5C-206ENST00000550406 CCNG1P51959 295 aa12.45□□□□□ -0.42
RAB5C-206ENST00000550406 ITGA1P56199 1179 aa12.45□□□□□ -0.42
RAB5C-206ENST00000550406 RAB15P59190 212 aa12.45□□□□□ -0.42
RAB5C-206ENST00000550406 HYAL2Q12891 473 aa12.45□□□□□ -0.42
RAB5C-206ENST00000550406 RBBP5Q15291 538 aaKnown RBP12.45□□□□□ -0.42
RAB5C-206ENST00000550406 RBBP7Q16576 425 aa12.45□□□□□ -0.42
RAB5C-206ENST00000550406 HKDC1Q2TB90 917 aa12.45□□□□□ -0.42
RAB5C-206ENST00000550406 DCAF12Q5T6F0 453 aa12.45□□□□□ -0.42
RAB5C-206ENST00000550406 TMIGD1Q6UXZ0 262 aa12.45□□□□□ -0.42
RAB5C-206ENST00000550406 PPP1R3BQ86XI6 285 aa12.45□□□□□ -0.42
RAB5C-206ENST00000550406 NUDCD3Q8IVD9 361 aa12.45□□□□□ -0.42
RAB5C-206ENST00000550406 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.45□□□□□ -0.42
RAB5C-206ENST00000550406 LAS2Q8IYD9 372 aa12.45□□□□□ -0.42
RAB5C-206ENST00000550406 RNF175Q8N4F7 328 aa12.45□□□□□ -0.42
RAB5C-206ENST00000550406 DTWD1Q8N5C7 304 aa12.45□□□□□ -0.42
RAB5C-206ENST00000550406 ZNF655Q8N720 491 aaPredicted RBP12.45□□□□□ -0.42
RAB5C-206ENST00000550406 OR8K5Q8NH50 307 aa12.45□□□□□ -0.42
RAB5C-206ENST00000550406 MGARPQ8TDB4 240 aa12.45□□□□□ -0.42
RAB5C-206ENST00000550406 CREB3L4Q8TEY5 395 aa12.45□□□□□ -0.42
RAB5C-206ENST00000550406 PPP4R1Q8TF05 950 aa12.45□□□□□ -0.42
RAB5C-206ENST00000550406 ZNF382Q96SR6 550 aa12.45□□□□□ -0.42
RAB5C-206ENST00000550406 EFCAB11Q9BUY7 163 aa12.45□□□□□ -0.42
RAB5C-206ENST00000550406 B3GNT4Q9C0J1 378 aa12.45□□□□□ -0.42
RAB5C-206ENST00000550406 ACTR8Q9H981 624 aa12.45□□□□□ -0.42
RAB5C-206ENST00000550406 SERTAD3Q9UJW9 196 aa12.45□□□□□ -0.42
RAB5C-206ENST00000550406 AP1M2Q9Y6Q5 423 aa12.45□□□□□ -0.42
RAB5C-206ENST00000550406 SCN2AQ99250 2005 aa12.44□□□□□ -0.42
RAB5C-206ENST00000550406 TEX51A0A1B0GUA7 166 aa12.44□□□□□ -0.42
RAB5C-206ENST00000550406 ZNF749O43361 778 aa12.44□□□□□ -0.42
RAB5C-206ENST00000550406 NPHS1O60500 1241 aa12.44□□□□□ -0.42
RAB5C-206ENST00000550406 CLDN9O95484 217 aa12.44□□□□□ -0.42
RAB5C-206ENST00000550406 DLGAP3O95886 979 aa12.44□□□□□ -0.42
RAB5C-206ENST00000550406 NTRK1P04629 796 aa12.44□□□□□ -0.42
RAB5C-206ENST00000550406 EIF2S1P05198 315 aaKnown RBP12.44□□□□□ -0.42
RAB5C-206ENST00000550406 CXCR2P25025 360 aa12.44□□□□□ -0.42
RAB5C-206ENST00000550406 GRK3P35626 688 aa12.44□□□□□ -0.42
RAB5C-206ENST00000550406 AHRP35869 848 aa12.44□□□□□ -0.42
RAB5C-206ENST00000550406 HNF4AP41235 474 aa12.44□□□□□ -0.42
RAB5C-206ENST00000550406 LAPTM5Q13571 262 aa12.44□□□□□ -0.42
RAB5C-206ENST00000550406 CPSF6Q16630 551 aaKnown RBP eCLIP12.44□□□□□ -0.42
RAB5C-206ENST00000550406 GGTA1PQ4G0N0 100 aa12.44□□□□□ -0.42
RAB5C-206ENST00000550406 TCTE1Q5JU00 501 aa12.44□□□□□ -0.42
RAB5C-206ENST00000550406 TIPARPQ7Z3E1 657 aaKnown RBP12.44□□□□□ -0.42
RAB5C-206ENST00000550406 MILR1Q7Z6M3 343 aa12.44□□□□□ -0.42
RAB5C-206ENST00000550406 ASPGQ86U10 573 aa12.44□□□□□ -0.42
RAB5C-206ENST00000550406 KRT78Q8N1N4 520 aa12.44□□□□□ -0.42
RAB5C-206ENST00000550406 CSNK1A1LQ8N752 337 aa12.44□□□□□ -0.42
RAB5C-206ENST00000550406 GOLGA6L1Q8N7Z2 621 aa12.44□□□□□ -0.42
RAB5C-206ENST00000550406 KCT2Q8NC54 265 aa12.44□□□□□ -0.42
RAB5C-206ENST00000550406 OR7G3Q8NG95 312 aa12.44□□□□□ -0.42
RAB5C-206ENST00000550406 AGAP11Q8TF27 550 aa12.44□□□□□ -0.42
RAB5C-206ENST00000550406 ZNF473Q8WTR7 871 aaKnown RBP12.44□□□□□ -0.42
RAB5C-206ENST00000550406 ATP6V1E2Q96A05 226 aa12.44□□□□□ -0.42
RAB5C-206ENST00000550406 CNDP1Q96KN2 507 aa12.44□□□□□ -0.42
RAB5C-206ENST00000550406 C10orf90Q96M02 699 aa12.44□□□□□ -0.42
RAB5C-206ENST00000550406 ASPSCR1Q9BZE9 553 aa12.44□□□□□ -0.42
RAB5C-206ENST00000550406 C20orf27Q9GZN8 174 aa12.44□□□□□ -0.42
RAB5C-206ENST00000550406 PITHD1Q9GZP4 211 aaPredicted RBP12.44□□□□□ -0.42
RAB5C-206ENST00000550406 RHBGQ9H310 441 aa12.44□□□□□ -0.42
RAB5C-206ENST00000550406 ACBD3Q9H3P7 528 aa12.44□□□□□ -0.42
RAB5C-206ENST00000550406 ZNF395Q9H8N7 513 aaPredicted RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms