RNA–Protein interactions for RNA: ENST00000549970.5

VPS29-207, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 818 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-207ENST00000549970 ZCCHC10Q8TBK6 192 aa15.49■□□□□ 0.07
VPS29-207ENST00000549970 FAM45AQ8TCE6 357 aa15.49■□□□□ 0.07
VPS29-207ENST00000549970 PYCR2Q96C36 320 aa15.49■□□□□ 0.07
VPS29-207ENST00000549970 LRRC39Q96DD0 335 aa15.49■□□□□ 0.07
VPS29-207ENST00000549970 SNF8Q96H20 258 aa15.49■□□□□ 0.07
VPS29-207ENST00000549970 PSMG3-AS1Q96PY0 264 aa15.49■□□□□ 0.07
VPS29-207ENST00000549970 OLFM1Q99784 485 aa15.49■□□□□ 0.07
VPS29-207ENST00000549970 SGPP1Q9BX95 441 aa15.49■□□□□ 0.07
VPS29-207ENST00000549970 TGIF2Q9GZN2 237 aa15.49■□□□□ 0.07
VPS29-207ENST00000549970 ARL15Q9NXU5 204 aa15.49■□□□□ 0.07
VPS29-207ENST00000549970 MKL2Q9ULH7 1088 aa15.49■□□□□ 0.07
VPS29-207ENST00000549970 PYCARDQ9ULZ3 195 aa15.49■□□□□ 0.07
VPS29-207ENST00000549970 VWA7Q9Y334 891 aa15.49■□□□□ 0.07
VPS29-207ENST00000549970 SCN3AQ9NY46 2000 aa15.49■□□□□ 0.07
VPS29-207ENST00000549970 USP9YO00507 2555 aaPredicted RBP15.48■□□□□ 0.07
VPS29-207ENST00000549970 SPTAN1Q13813 2472 aaKnown RBP15.48■□□□□ 0.07
VPS29-207ENST00000549970 KCNE1BA0A087WTH5 132 aa15.48■□□□□ 0.07
VPS29-207ENST00000549970 IGHV1-45A0A0A0MS14 117 aa15.48■□□□□ 0.07
VPS29-207ENST00000549970 CCDC188H7C350 402 aa15.48■□□□□ 0.07
VPS29-207ENST00000549970 KLHL18O94889 574 aa15.48■□□□□ 0.07
VPS29-207ENST00000549970 CELA2AP08217 269 aa15.48■□□□□ 0.07
VPS29-207ENST00000549970 GP1BBP13224 206 aa15.48■□□□□ 0.07
VPS29-207ENST00000549970 IL1RNP18510 177 aa15.48■□□□□ 0.07
VPS29-207ENST00000549970 SAT1P21673 171 aa15.48■□□□□ 0.07
VPS29-207ENST00000549970 CCND1P24385 295 aa15.48■□□□□ 0.07
VPS29-207ENST00000549970 GRK3P35626 688 aa15.48■□□□□ 0.07
VPS29-207ENST00000549970 BCL6P41182 706 aa15.48■□□□□ 0.07
VPS29-207ENST00000549970 PDIA2Q13087 525 aaKnown RBP15.48■□□□□ 0.07
VPS29-207ENST00000549970 CRB2Q5IJ48 1285 aa15.48■□□□□ 0.07
VPS29-207ENST00000549970 CAPN13Q6MZZ7 669 aaPredicted RBP15.48■□□□□ 0.07
VPS29-207ENST00000549970 ISLR2Q6UXK2 745 aa15.48■□□□□ 0.07
VPS29-207ENST00000549970 SHISA5Q8N114 240 aa15.48■□□□□ 0.07
VPS29-207ENST00000549970 CAMKVQ8NCB2 501 aa15.48■□□□□ 0.07
VPS29-207ENST00000549970 BRIX1Q8TDN6 353 aaKnown RBP15.48■□□□□ 0.07
VPS29-207ENST00000549970 THAP11Q96EK4 314 aa15.48■□□□□ 0.07
VPS29-207ENST00000549970 TRIM54Q9BYV2 358 aa15.48■□□□□ 0.07
VPS29-207ENST00000549970 ZFATQ9P243 1243 aa15.48■□□□□ 0.07
VPS29-207ENST00000549970 PTGFRNQ9P2B2 879 aa15.48■□□□□ 0.07
VPS29-207ENST00000549970 CORO1CQ9ULV4 474 aaPredicted RBP15.48■□□□□ 0.07
VPS29-207ENST00000549970 NTNG1Q9Y2I2 539 aa15.48■□□□□ 0.07
VPS29-207ENST00000549970 ICE1Q9Y2F5 2266 aa15.48■□□□□ 0.07
VPS29-207ENST00000549970 SPTBN1Q01082 2364 aaKnown RBP15.48■□□□□ 0.07
VPS29-207ENST00000549970 HIVEP3Q5T1R4 2406 aa15.47■□□□□ 0.07
VPS29-207ENST00000549970 EFCAB8A8MWE9 144 aa15.47■□□□□ 0.07
VPS29-207ENST00000549970 H0YIG0 161 aa15.47■□□□□ 0.07
VPS29-207ENST00000549970 LCMT2O60294 686 aaKnown RBP15.47■□□□□ 0.07
VPS29-207ENST00000549970 JRKO75564 520 aa15.47■□□□□ 0.07
VPS29-207ENST00000549970 BMP10O95393 424 aa15.47■□□□□ 0.07
VPS29-207ENST00000549970 NSA2O95478 260 aaKnown RBP15.47■□□□□ 0.07
VPS29-207ENST00000549970 GUCA1CO95843 209 aa15.47■□□□□ 0.07
VPS29-207ENST00000549970 UQCRHP07919 91 aa15.47■□□□□ 0.07
VPS29-207ENST00000549970 PRR35P0CG20 571 aa15.47■□□□□ 0.07
VPS29-207ENST00000549970 NPPBP16860 134 aa15.47■□□□□ 0.07
VPS29-207ENST00000549970 EFNA3P52797 238 aa15.47■□□□□ 0.07
VPS29-207ENST00000549970 AP1S2P56377 157 aa15.47■□□□□ 0.07
VPS29-207ENST00000549970 MEF2AQ02078 507 aaPredicted RBP15.47■□□□□ 0.07
VPS29-207ENST00000549970 CDC16Q13042 620 aa15.47■□□□□ 0.07
VPS29-207ENST00000549970 MFAP5Q13361 173 aa15.47■□□□□ 0.07
VPS29-207ENST00000549970 ZNF169Q14929 603 aaPredicted RBP15.47■□□□□ 0.07
VPS29-207ENST00000549970 FASTKD3Q14CZ7 662 aaKnown RBP15.47■□□□□ 0.07
VPS29-207ENST00000549970 ZXDCQ2QGD7 858 aaPredicted RBP15.47■□□□□ 0.07
VPS29-207ENST00000549970 MINDY4Q4G0A6 757 aa15.47■□□□□ 0.07
VPS29-207ENST00000549970 MFSD4BQ5TF39 518 aa15.47■□□□□ 0.07
VPS29-207ENST00000549970 TMEM214Q6NUQ4 689 aaKnown RBP15.47■□□□□ 0.07
VPS29-207ENST00000549970 ASPGQ86U10 573 aa15.47■□□□□ 0.07
VPS29-207ENST00000549970 SIRT6Q8N6T7 355 aa15.47■□□□□ 0.07
VPS29-207ENST00000549970 KCT2Q8NC54 265 aa15.47■□□□□ 0.07
VPS29-207ENST00000549970 FBXO36Q8NEA4 188 aa15.47■□□□□ 0.07
VPS29-207ENST00000549970 SSC4DQ8WTU2 575 aa15.47■□□□□ 0.07
VPS29-207ENST00000549970 PDLIM2Q96JY6 352 aa15.47■□□□□ 0.07
VPS29-207ENST00000549970 KRT12Q99456 494 aa15.47■□□□□ 0.07
VPS29-207ENST00000549970 HAUS8Q9BT25 410 aa15.47■□□□□ 0.07
VPS29-207ENST00000549970 RIC8BQ9NVN3 520 aa15.47■□□□□ 0.07
VPS29-207ENST00000549970 HCN3Q9P1Z3 774 aa15.47■□□□□ 0.07
VPS29-207ENST00000549970 SNX24Q9Y343 169 aa15.47■□□□□ 0.07
VPS29-207ENST00000549970 PSAT1Q9Y617 370 aa15.47■□□□□ 0.07
VPS29-207ENST00000549970 NAV2Q8IVL1 2488 aa15.46■□□□□ 0.07
VPS29-207ENST00000549970 MAST4O15021 2626 aa15.46■□□□□ 0.07
VPS29-207ENST00000549970 A0A1W2PQ72 361 aa15.46■□□□□ 0.07
VPS29-207ENST00000549970 ANKUB1A6NFN9 424 aa15.46■□□□□ 0.07
VPS29-207ENST00000549970 SGK494L7N484 410 aa15.46■□□□□ 0.07
VPS29-207ENST00000549970 FANCGO15287 622 aa15.46■□□□□ 0.07
VPS29-207ENST00000549970 TP73O15350 636 aa15.46■□□□□ 0.07
VPS29-207ENST00000549970 CBX6O95503 412 aa15.46■□□□□ 0.07
VPS29-207ENST00000549970 RNF224P0DH78 156 aa15.46■□□□□ 0.07
VPS29-207ENST00000549970 C8orf89P0DMQ9 161 aa15.46■□□□□ 0.07
VPS29-207ENST00000549970 RPL21P46778 160 aaKnown RBP15.46■□□□□ 0.07
VPS29-207ENST00000549970 ARG2P78540 354 aa15.46■□□□□ 0.07
VPS29-207ENST00000549970 MRPS25P82663 173 aaKnown RBP15.46■□□□□ 0.07
VPS29-207ENST00000549970 MGAT5Q09328 741 aa15.46■□□□□ 0.07
VPS29-207ENST00000549970 PCOLCEQ15113 449 aa15.46■□□□□ 0.07
VPS29-207ENST00000549970 TLR1Q15399 786 aa15.46■□□□□ 0.07
VPS29-207ENST00000549970 DUPD1Q68J44 220 aa15.46■□□□□ 0.07
VPS29-207ENST00000549970 TMEM205Q6UW68 189 aa15.46■□□□□ 0.07
VPS29-207ENST00000549970 STRA8Q7Z7C7 330 aa15.46■□□□□ 0.07
VPS29-207ENST00000549970 SLC26A11Q86WA9 606 aa15.46■□□□□ 0.07
VPS29-207ENST00000549970 AMER2Q8N7J2 671 aa15.46■□□□□ 0.07
VPS29-207ENST00000549970 CATSPER1Q8NEC5 780 aa15.46■□□□□ 0.07
VPS29-207ENST00000549970 OR56A3Q8NH54 315 aa15.46■□□□□ 0.07
VPS29-207ENST00000549970 SLC13A3Q8WWT9 602 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms