RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 NFE2L1Q14494 772 aa9.6□□□□□ -0.87
RAB5B-206ENST00000549505 HIST2H2ACQ16777 129 aaPredicted RBP9.6□□□□□ -0.87
RAB5B-206ENST00000549505 HKDC1Q2TB90 917 aa9.6□□□□□ -0.87
RAB5B-206ENST00000549505 HIST2H2AA3Q6FI13 130 aa9.6□□□□□ -0.87
RAB5B-206ENST00000549505 CES5AQ6NT32 575 aa9.6□□□□□ -0.87
RAB5B-206ENST00000549505 PTOV1Q86YD1 416 aa9.6□□□□□ -0.87
RAB5B-206ENST00000549505 FAM110BQ8TC76 370 aa9.6□□□□□ -0.87
RAB5B-206ENST00000549505 GBP5Q96PP8 586 aa9.6□□□□□ -0.87
RAB5B-206ENST00000549505 INPP5KQ9BT40 448 aa9.6□□□□□ -0.87
RAB5B-206ENST00000549505 C1QTNF7Q9BXJ2 289 aa9.6□□□□□ -0.87
RAB5B-206ENST00000549505 REEP4Q9H6H4 257 aa9.6□□□□□ -0.87
RAB5B-206ENST00000549505 EPS8L2Q9H6S3 715 aa9.6□□□□□ -0.87
RAB5B-206ENST00000549505 MVB12BQ9H7P6 319 aa9.6□□□□□ -0.87
RAB5B-206ENST00000549505 SH2B3Q9UQQ2 575 aa9.6□□□□□ -0.87
RAB5B-206ENST00000549505 GABRR3A8MPY1 467 aa9.6□□□□□ -0.87
RAB5B-206ENST00000549505 CACNB4O00305 520 aaPredicted RBP9.6□□□□□ -0.87
RAB5B-206ENST00000549505 AKAP10O43572 662 aa9.6□□□□□ -0.87
RAB5B-206ENST00000549505 CEACAM5P06731 702 aa9.6□□□□□ -0.87
RAB5B-206ENST00000549505 FURINP09958 794 aa9.6□□□□□ -0.87
RAB5B-206ENST00000549505 CXCR2P25025 360 aa9.6□□□□□ -0.87
RAB5B-206ENST00000549505 PKLRP30613 574 aa9.6□□□□□ -0.87
RAB5B-206ENST00000549505 GDI1P31150 447 aa9.6□□□□□ -0.87
RAB5B-206ENST00000549505 HPCAL1P37235 193 aa9.6□□□□□ -0.87
RAB5B-206ENST00000549505 CDKN2CP42773 168 aa9.6□□□□□ -0.87
RAB5B-206ENST00000549505 ALDH3B2P48448 385 aa9.6□□□□□ -0.87
RAB5B-206ENST00000549505 MVDP53602 400 aa9.6□□□□□ -0.87
RAB5B-206ENST00000549505 ACSM2AQ08AH3 577 aa9.6□□□□□ -0.87
RAB5B-206ENST00000549505 ZNF763Q0D2J5 394 aa9.6□□□□□ -0.87
RAB5B-206ENST00000549505 PON2Q15165 354 aa9.6□□□□□ -0.87
RAB5B-206ENST00000549505 ZIC1Q15915 447 aa9.6□□□□□ -0.87
RAB5B-206ENST00000549505 IQCCQ4KMZ1 466 aa9.6□□□□□ -0.87
RAB5B-206ENST00000549505 PRAMEF14Q5SWL7 426 aa9.6□□□□□ -0.87
RAB5B-206ENST00000549505 C1QTNF12Q5T7M4 302 aa9.6□□□□□ -0.87
RAB5B-206ENST00000549505 PRAMEF13Q5VWM6 474 aa9.6□□□□□ -0.87
RAB5B-206ENST00000549505 ACSM2BQ68CK6 577 aa9.6□□□□□ -0.87
RAB5B-206ENST00000549505 TRAPPC5Q8IUR0 188 aa9.6□□□□□ -0.87
RAB5B-206ENST00000549505 SYT12Q8IV01 421 aa9.6□□□□□ -0.87
RAB5B-206ENST00000549505 OR2L8Q8NGY9 312 aa9.6□□□□□ -0.87
RAB5B-206ENST00000549505 ZFP90Q8TF47 636 aa9.6□□□□□ -0.87
RAB5B-206ENST00000549505 SMPDL3AQ92484 453 aa9.6□□□□□ -0.87
RAB5B-206ENST00000549505 APOLD1Q96LR9 279 aa9.6□□□□□ -0.87
RAB5B-206ENST00000549505 PSD2Q9BQI7 771 aa9.6□□□□□ -0.87
RAB5B-206ENST00000549505 REXO4Q9GZR2 422 aaKnown RBP9.6□□□□□ -0.87
RAB5B-206ENST00000549505 RBM38Q9H0Z9 239 aaKnown RBP9.6□□□□□ -0.87
RAB5B-206ENST00000549505 TMEM38AQ9H6F2 299 aa9.6□□□□□ -0.87
RAB5B-206ENST00000549505 CARS2Q9HA77 564 aaKnown RBP9.6□□□□□ -0.87
RAB5B-206ENST00000549505 ZDHHC4Q9NPG8 344 aa9.6□□□□□ -0.87
RAB5B-206ENST00000549505 TAS2R7Q9NYW3 318 aa9.6□□□□□ -0.87
RAB5B-206ENST00000549505 ZNF232Q9UNY5 417 aa9.6□□□□□ -0.87
RAB5B-206ENST00000549505 USP22Q9UPT9 525 aa9.6□□□□□ -0.87
RAB5B-206ENST00000549505 YY2O15391 372 aa9.6□□□□□ -0.87
RAB5B-206ENST00000549505 ADAM23O75077 832 aa9.6□□□□□ -0.87
RAB5B-206ENST00000549505 DEAF1O75398 565 aaPredicted RBP9.6□□□□□ -0.87
RAB5B-206ENST00000549505 DRD1P21728 446 aa9.6□□□□□ -0.87
RAB5B-206ENST00000549505 PCGF2P35227 344 aa9.6□□□□□ -0.87
RAB5B-206ENST00000549505 LTBRP36941 435 aa9.6□□□□□ -0.87
RAB5B-206ENST00000549505 ERFP50548 548 aa9.6□□□□□ -0.87
RAB5B-206ENST00000549505 PPP2R2BQ00005 443 aa9.6□□□□□ -0.87
RAB5B-206ENST00000549505 RELAQ04206 551 aa9.6□□□□□ -0.87
RAB5B-206ENST00000549505 EEF1A2Q05639 463 aaKnown RBP9.6□□□□□ -0.87
RAB5B-206ENST00000549505 RBBP4Q09028 425 aa9.6□□□□□ -0.87
RAB5B-206ENST00000549505 SFSWAPQ12872 951 aaKnown RBP9.6□□□□□ -0.87
RAB5B-206ENST00000549505 LRRC36Q1X8D7 754 aa9.6□□□□□ -0.87
RAB5B-206ENST00000549505 PYCR3Q53H96 274 aa9.6□□□□□ -0.87
RAB5B-206ENST00000549505 SLC30A8Q8IWU4 369 aa9.6□□□□□ -0.87
RAB5B-206ENST00000549505 KRT78Q8N1N4 520 aa9.6□□□□□ -0.87
RAB5B-206ENST00000549505 ZCCHC7Q8N3Z6 543 aaKnown RBP9.6□□□□□ -0.87
RAB5B-206ENST00000549505 LGR4Q9BXB1 951 aa9.6□□□□□ -0.87
RAB5B-206ENST00000549505 SLC28A3Q9HAS3 691 aa9.6□□□□□ -0.87
RAB5B-206ENST00000549505 PRDM9Q9NQV7 894 aa9.6□□□□□ -0.87
RAB5B-206ENST00000549505 PHPT1Q9NRX4 125 aaPredicted RBP9.6□□□□□ -0.87
RAB5B-206ENST00000549505 ZNF282Q9UDV7 671 aaPredicted RBP9.6□□□□□ -0.87
RAB5B-206ENST00000549505 INVSQ9Y283 1065 aa9.6□□□□□ -0.87
RAB5B-206ENST00000549505 PLXND1Q9Y4D7 1925 aa9.6□□□□□ -0.87
RAB5B-206ENST00000549505 LRP4O75096 1905 aa9.59□□□□□ -0.87
RAB5B-206ENST00000549505 ARHGAP10A1A4S6 786 aa9.59□□□□□ -0.87
RAB5B-206ENST00000549505 PLK4O00444 970 aa9.59□□□□□ -0.87
RAB5B-206ENST00000549505 RFXANKO14593 260 aa9.59□□□□□ -0.87
RAB5B-206ENST00000549505 BMP10O95393 424 aa9.59□□□□□ -0.87
RAB5B-206ENST00000549505 ALDH3A2P51648 485 aa9.59□□□□□ -0.87
RAB5B-206ENST00000549505 VAC14Q08AM6 782 aa9.59□□□□□ -0.87
RAB5B-206ENST00000549505 MERTKQ12866 999 aa9.59□□□□□ -0.87
RAB5B-206ENST00000549505 NKG7Q16617 165 aa9.59□□□□□ -0.87
RAB5B-206ENST00000549505 ADPRMQ3LIE5 342 aa9.59□□□□□ -0.87
RAB5B-206ENST00000549505 LIN52Q52LA3 116 aa9.59□□□□□ -0.87
RAB5B-206ENST00000549505 CYBRD1Q53TN4 286 aa9.59□□□□□ -0.87
RAB5B-206ENST00000549505 CBLL1Q75N03 491 aa9.59□□□□□ -0.87
RAB5B-206ENST00000549505 HORMAD1Q86X24 394 aa9.59□□□□□ -0.87
RAB5B-206ENST00000549505 SMRP1Q8NCR6 262 aa9.59□□□□□ -0.87
RAB5B-206ENST00000549505 OR10A6Q8NH74 314 aa9.59□□□□□ -0.87
RAB5B-206ENST00000549505 NUDT8Q8WV74 236 aa9.59□□□□□ -0.87
RAB5B-206ENST00000549505 SKA2Q8WVK7 121 aaPredicted RBP9.59□□□□□ -0.87
RAB5B-206ENST00000549505 TFGQ92734 400 aaPredicted RBP9.59□□□□□ -0.87
RAB5B-206ENST00000549505 FOXJ1Q92949 421 aa9.59□□□□□ -0.87
RAB5B-206ENST00000549505 MTFMTQ96DP5 389 aaKnown RBP9.59□□□□□ -0.87
RAB5B-206ENST00000549505 AURKBQ96GD4 344 aaPredicted RBP9.59□□□□□ -0.87
RAB5B-206ENST00000549505 PYURFQ96I23 114 aa9.59□□□□□ -0.87
RAB5B-206ENST00000549505 EGLN2Q96KS0 407 aa9.59□□□□□ -0.87
RAB5B-206ENST00000549505 PRPF18Q99633 342 aaKnown RBP9.59□□□□□ -0.87
RAB5B-206ENST00000549505 KXD1Q9BQD3 176 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms