RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 ZNF33BQ06732 778 aa12.16□□□□□ -0.46
PTCH1-218ENST00000548945 PTK6Q13882 451 aa12.16□□□□□ -0.46
PTCH1-218ENST00000548945 XKRXQ6PP77 449 aa12.16□□□□□ -0.46
PTCH1-218ENST00000548945 CPEB2Q7Z5Q1 589 aaKnown RBP12.16□□□□□ -0.46
PTCH1-218ENST00000548945 ADCK2Q7Z695 626 aa12.16□□□□□ -0.46
PTCH1-218ENST00000548945 LRRC56Q8IYG6 542 aaPredicted RBP12.16□□□□□ -0.46
PTCH1-218ENST00000548945 MCOLN3Q8TDD5 553 aa12.16□□□□□ -0.46
PTCH1-218ENST00000548945 THAP11Q96EK4 314 aa12.16□□□□□ -0.46
PTCH1-218ENST00000548945 ZNF354BQ96LW1 612 aa12.16□□□□□ -0.46
PTCH1-218ENST00000548945 CYTH2Q99418 400 aa12.16□□□□□ -0.46
PTCH1-218ENST00000548945 FAM129AQ9BZQ8 928 aa12.16□□□□□ -0.46
PTCH1-218ENST00000548945 TMEM184CQ9NVA4 438 aa12.16□□□□□ -0.46
PTCH1-218ENST00000548945 SAMD15Q9P1V8 674 aa12.16□□□□□ -0.46
PTCH1-218ENST00000548945 COMMD10Q9Y6G5 202 aa12.16□□□□□ -0.46
PTCH1-218ENST00000548945 MTORP42345 2549 aa12.15□□□□□ -0.46
PTCH1-218ENST00000548945 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.15□□□□□ -0.46
PTCH1-218ENST00000548945 FAM237BA0A1B0GVD1 139 aa12.15□□□□□ -0.46
PTCH1-218ENST00000548945 TCRBV7S3A2A0A539 114 aa12.15□□□□□ -0.46
PTCH1-218ENST00000548945 H7BY64 318 aa12.15□□□□□ -0.46
PTCH1-218ENST00000548945 CDK2AP1O14519 115 aa12.15□□□□□ -0.46
PTCH1-218ENST00000548945 ZBTB14O43829 449 aa12.15□□□□□ -0.46
PTCH1-218ENST00000548945 MLYCDO95822 493 aa12.15□□□□□ -0.46
PTCH1-218ENST00000548945 F10P00742 488 aa12.15□□□□□ -0.46
PTCH1-218ENST00000548945 FGGP02679 453 aa12.15□□□□□ -0.46
PTCH1-218ENST00000548945 MLNP12872 115 aa12.15□□□□□ -0.46
PTCH1-218ENST00000548945 AGAP20933 346 aa12.15□□□□□ -0.46
PTCH1-218ENST00000548945 AGTR2P50052 363 aa12.15□□□□□ -0.46
PTCH1-218ENST00000548945 SYT16Q17RD7 645 aa12.15□□□□□ -0.46
PTCH1-218ENST00000548945 ZNF630Q2M218 657 aaPredicted RBP12.15□□□□□ -0.46
PTCH1-218ENST00000548945 ZNF766Q5HY98 468 aa12.15□□□□□ -0.46
PTCH1-218ENST00000548945 ACER2Q5QJU3 275 aa12.15□□□□□ -0.46
PTCH1-218ENST00000548945 THEMIS2Q5TEJ8 643 aa12.15□□□□□ -0.46
PTCH1-218ENST00000548945 ZNF470Q6ECI4 717 aa12.15□□□□□ -0.46
PTCH1-218ENST00000548945 GDF7Q7Z4P5 450 aa12.15□□□□□ -0.46
PTCH1-218ENST00000548945 MRGPRGQ86SM5 289 aa12.15□□□□□ -0.46
PTCH1-218ENST00000548945 LMNTD2Q8IXW0 634 aa12.15□□□□□ -0.46
PTCH1-218ENST00000548945 PRELID2Q8N945 189 aa12.15□□□□□ -0.46
PTCH1-218ENST00000548945 PPFIBP2Q8ND30 876 aa12.15□□□□□ -0.46
PTCH1-218ENST00000548945 GIMAP7Q8NHV1 300 aa12.15□□□□□ -0.46
PTCH1-218ENST00000548945 PRAP1Q96NZ9 151 aa12.15□□□□□ -0.46
PTCH1-218ENST00000548945 PHF12Q96QT6 1004 aa12.15□□□□□ -0.46
PTCH1-218ENST00000548945 PCBD2Q9H0N5 130 aa12.15□□□□□ -0.46
PTCH1-218ENST00000548945 CCDC68Q9H2F9 335 aa12.15□□□□□ -0.46
PTCH1-218ENST00000548945 MED16Q9Y2X0 877 aa12.15□□□□□ -0.46
PTCH1-218ENST00000548945 DHRS7Q9Y394 339 aa12.15□□□□□ -0.46
PTCH1-218ENST00000548945 CTAGE9A4FU28 777 aa12.14□□□□□ -0.47
PTCH1-218ENST00000548945 SYF2O95926 243 aaKnown RBP12.14□□□□□ -0.47
PTCH1-218ENST00000548945 IL10P22301 178 aa12.14□□□□□ -0.47
PTCH1-218ENST00000548945 HTR1EP28566 365 aa12.14□□□□□ -0.47
PTCH1-218ENST00000548945 GRNP28799 593 aaKnown RBP12.14□□□□□ -0.47
PTCH1-218ENST00000548945 IMPA1P29218 277 aa12.14□□□□□ -0.47
PTCH1-218ENST00000548945 XCR1P46094 333 aa12.14□□□□□ -0.47
PTCH1-218ENST00000548945 KCNJ1P48048 391 aa12.14□□□□□ -0.47
PTCH1-218ENST00000548945 MAT1AQ00266 395 aaKnown RBP12.14□□□□□ -0.47
PTCH1-218ENST00000548945 DHX34Q14147 1143 aaKnown RBP12.14□□□□□ -0.47
PTCH1-218ENST00000548945 EXT1Q16394 746 aa12.14□□□□□ -0.47
PTCH1-218ENST00000548945 BTBD16Q32M84 506 aa12.14□□□□□ -0.47
PTCH1-218ENST00000548945 KRTCAP3Q53RY4 240 aa12.14□□□□□ -0.47
PTCH1-218ENST00000548945 LRRC8EQ6NSJ5 796 aa12.14□□□□□ -0.47
PTCH1-218ENST00000548945 TMEM214Q6NUQ4 689 aaKnown RBP12.14□□□□□ -0.47
PTCH1-218ENST00000548945 CASC4Q6P4E1 433 aa12.14□□□□□ -0.47
PTCH1-218ENST00000548945 CYHR1Q6ZMK1 362 aa12.14□□□□□ -0.47
PTCH1-218ENST00000548945 VN1R4Q7Z5H5 301 aa12.14□□□□□ -0.47
PTCH1-218ENST00000548945 CAND1Q86VP6 1230 aaKnown RBP12.14□□□□□ -0.47
PTCH1-218ENST00000548945 PLD3Q8IV08 490 aa12.14□□□□□ -0.47
PTCH1-218ENST00000548945 CAMKVQ8NCB2 501 aa12.14□□□□□ -0.47
PTCH1-218ENST00000548945 OR9A4Q8NGU2 314 aa12.14□□□□□ -0.47
PTCH1-218ENST00000548945 OR51Q1Q8NH59 317 aa12.14□□□□□ -0.47
PTCH1-218ENST00000548945 M1APQ8TC57 530 aa12.14□□□□□ -0.47
PTCH1-218ENST00000548945 THAP3Q8WTV1 239 aaPredicted RBP12.14□□□□□ -0.47
PTCH1-218ENST00000548945 SLC30A3Q99726 388 aa12.14□□□□□ -0.47
PTCH1-218ENST00000548945 CCDC177Q9NQR7 707 aaPredicted RBP12.14□□□□□ -0.47
PTCH1-218ENST00000548945 SDR42E2A6NKP2 422 aa12.13□□□□□ -0.47
PTCH1-218ENST00000548945 A8MUI8 341 aa12.13□□□□□ -0.47
PTCH1-218ENST00000548945 ESPNB1AK53 854 aa12.13□□□□□ -0.47
PTCH1-218ENST00000548945 TTI1O43156 1089 aa12.13□□□□□ -0.47
PTCH1-218ENST00000548945 SLC19A2O60779 497 aa12.13□□□□□ -0.47
PTCH1-218ENST00000548945 AVILO75366 819 aa12.13□□□□□ -0.47
PTCH1-218ENST00000548945 SEC24DO94855 1032 aaPredicted RBP12.13□□□□□ -0.47
PTCH1-218ENST00000548945 CCND1P24385 295 aa12.13□□□□□ -0.47
PTCH1-218ENST00000548945 BCL6P41182 706 aa12.13□□□□□ -0.47
PTCH1-218ENST00000548945 CUL1Q13616 776 aa12.13□□□□□ -0.47
PTCH1-218ENST00000548945 THOC5Q13769 683 aaKnown RBP12.13□□□□□ -0.47
PTCH1-218ENST00000548945 MEP1AQ16819 746 aa12.13□□□□□ -0.47
PTCH1-218ENST00000548945 ZXDCQ2QGD7 858 aaPredicted RBP12.13□□□□□ -0.47
PTCH1-218ENST00000548945 MINDY4Q4G0A6 757 aa12.13□□□□□ -0.47
PTCH1-218ENST00000548945 MFSD4BQ5TF39 518 aa12.13□□□□□ -0.47
PTCH1-218ENST00000548945 ZNF549Q6P9A3 640 aa12.13□□□□□ -0.47
PTCH1-218ENST00000548945 ZNF662Q6ZS27 426 aa12.13□□□□□ -0.47
PTCH1-218ENST00000548945 LANCL3Q6ZV70 420 aa12.13□□□□□ -0.47
PTCH1-218ENST00000548945 ANKRD37Q7Z713 158 aa12.13□□□□□ -0.47
PTCH1-218ENST00000548945 LGI4Q8N135 537 aa12.13□□□□□ -0.47
PTCH1-218ENST00000548945 MDS2Q8NDY4 140 aa12.13□□□□□ -0.47
PTCH1-218ENST00000548945 MCUQ8NE86 351 aa12.13□□□□□ -0.47
PTCH1-218ENST00000548945 CD200R1Q8TD46 325 aa12.13□□□□□ -0.47
PTCH1-218ENST00000548945 CALML6Q8TD86 181 aa12.13□□□□□ -0.47
PTCH1-218ENST00000548945 TM4SF19Q96DZ7 209 aa12.13□□□□□ -0.47
PTCH1-218ENST00000548945 OR1F2PQ96R84 312 aa12.13□□□□□ -0.47
PTCH1-218ENST00000548945 ANKHQ9HCJ1 492 aa12.13□□□□□ -0.47
PTCH1-218ENST00000548945 XAB2Q9HCS7 855 aaKnown RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms