RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 CCDC92Q53HC0 331 aaPredicted RBP13.66□□□□□ -0.22
RAPGEF3-218ENST00000548919 TPRG1LQ5T0D9 272 aa13.66□□□□□ -0.22
RAPGEF3-218ENST00000548919 ANGPTL8Q6UXH0 198 aa13.66□□□□□ -0.22
RAPGEF3-218ENST00000548919 GPR155Q7Z3F1 870 aa13.66□□□□□ -0.22
RAPGEF3-218ENST00000548919 HEATR4Q86WZ0 1026 aa13.66□□□□□ -0.22
RAPGEF3-218ENST00000548919 PGBD3Q8N328 593 aa13.66□□□□□ -0.22
RAPGEF3-218ENST00000548919 ASB11Q8WXH4 323 aa13.66□□□□□ -0.22
RAPGEF3-218ENST00000548919 POP5Q969H6 163 aaKnown RBP13.66□□□□□ -0.22
RAPGEF3-218ENST00000548919 ASIC4Q96FT7 647 aa13.66□□□□□ -0.22
RAPGEF3-218ENST00000548919 CENPOQ9BU64 300 aa13.66□□□□□ -0.22
RAPGEF3-218ENST00000548919 PLXNB3Q9ULL4 1909 aa13.65□□□□□ -0.22
RAPGEF3-218ENST00000548919 PSMD11O00231 422 aa13.65□□□□□ -0.22
RAPGEF3-218ENST00000548919 GFRA2O00451 464 aa13.65□□□□□ -0.22
RAPGEF3-218ENST00000548919 PTHP01270 115 aa13.65□□□□□ -0.22
RAPGEF3-218ENST00000548919 ALOX12P18054 663 aa13.65□□□□□ -0.22
RAPGEF3-218ENST00000548919 PCYT1AP49585 367 aa13.65□□□□□ -0.22
RAPGEF3-218ENST00000548919 ACLYP53396 1101 aa13.65□□□□□ -0.22
RAPGEF3-218ENST00000548919 ELP6Q0PNE2 266 aa13.65□□□□□ -0.22
RAPGEF3-218ENST00000548919 SMARCB1Q12824 385 aa13.65□□□□□ -0.22
RAPGEF3-218ENST00000548919 CDC20Q12834 499 aa13.65□□□□□ -0.22
RAPGEF3-218ENST00000548919 GAB1Q13480 694 aa13.65□□□□□ -0.22
RAPGEF3-218ENST00000548919 TP53BP2Q13625 1128 aa13.65□□□□□ -0.22
RAPGEF3-218ENST00000548919 DGKKQ5KSL6 1271 aa13.65□□□□□ -0.22
RAPGEF3-218ENST00000548919 DESI1Q6ICB0 168 aa13.65□□□□□ -0.22
RAPGEF3-218ENST00000548919 ERICH5Q6P6B1 374 aa13.65□□□□□ -0.22
RAPGEF3-218ENST00000548919 AKAP14Q86UN6 197 aa13.65□□□□□ -0.22
RAPGEF3-218ENST00000548919 FAM9CQ8IZT9 166 aa13.65□□□□□ -0.22
RAPGEF3-218ENST00000548919 NAGSQ8N159 534 aa13.65□□□□□ -0.22
RAPGEF3-218ENST00000548919 DNAJC22Q8N4W6 341 aa13.65□□□□□ -0.22
RAPGEF3-218ENST00000548919 PARP16Q8N5Y8 322 aa13.65□□□□□ -0.22
RAPGEF3-218ENST00000548919 DBF4BQ8NFT6 615 aa13.65□□□□□ -0.22
RAPGEF3-218ENST00000548919 ZNF675Q8TD23 568 aa13.65□□□□□ -0.22
RAPGEF3-218ENST00000548919 CSGALNACT1Q8TDX6 532 aa13.65□□□□□ -0.22
RAPGEF3-218ENST00000548919 FOXJ1Q92949 421 aa13.65□□□□□ -0.22
RAPGEF3-218ENST00000548919 CHCHD6Q9BRQ6 235 aa13.65□□□□□ -0.22
RAPGEF3-218ENST00000548919 GABARAPL3Q9BY60 117 aa13.65□□□□□ -0.22
RAPGEF3-218ENST00000548919 CPNE5Q9HCH3 593 aa13.65□□□□□ -0.22
RAPGEF3-218ENST00000548919 ZDHHC3Q9NYG2 299 aa13.65□□□□□ -0.22
RAPGEF3-218ENST00000548919 RAPGEFL1Q9UHV5 662 aa13.65□□□□□ -0.22
RAPGEF3-218ENST00000548919 ZNF106Q9H2Y7 1883 aaKnown RBP13.65□□□□□ -0.22
RAPGEF3-218ENST00000548919 MKI67P46013 3256 aaKnown RBP13.65□□□□□ -0.22
RAPGEF3-218ENST00000548919 MANSC4A6NHS7 340 aaPredicted RBP13.65□□□□□ -0.22
RAPGEF3-218ENST00000548919 PCDH7O60245 1069 aa13.65□□□□□ -0.22
RAPGEF3-218ENST00000548919 ZNF821O75541 412 aaPredicted RBP13.65□□□□□ -0.22
RAPGEF3-218ENST00000548919 GCM2O75603 506 aaPredicted RBP13.65□□□□□ -0.22
RAPGEF3-218ENST00000548919 POU2F1P14859 743 aa13.65□□□□□ -0.22
RAPGEF3-218ENST00000548919 TUFMP49411 452 aaKnown RBP13.65□□□□□ -0.22
RAPGEF3-218ENST00000548919 CAP1Q01518 475 aa13.65□□□□□ -0.22
RAPGEF3-218ENST00000548919 SRSF11Q05519 484 aaKnown RBP13.65□□□□□ -0.22
RAPGEF3-218ENST00000548919 SPATC1Q76KD6 591 aa13.65□□□□□ -0.22
RAPGEF3-218ENST00000548919 CLIP4Q8N3C7 705 aa13.65□□□□□ -0.22
RAPGEF3-218ENST00000548919 DCAF4L2Q8NA75 395 aa13.65□□□□□ -0.22
RAPGEF3-218ENST00000548919 C2orf15Q8WU43 125 aaKnown RBP13.65□□□□□ -0.22
RAPGEF3-218ENST00000548919 EPYCQ99645 322 aa13.65□□□□□ -0.22
RAPGEF3-218ENST00000548919 NIPSNAP1Q9BPW8 284 aa13.65□□□□□ -0.22
RAPGEF3-218ENST00000548919 SP140LQ9H930 580 aa13.65□□□□□ -0.22
RAPGEF3-218ENST00000548919 DNAJC11Q9NVH1 559 aa13.65□□□□□ -0.22
RAPGEF3-218ENST00000548919 PCDHB11Q9Y5F2 797 aa13.65□□□□□ -0.22
RAPGEF3-218ENST00000548919 ANAPC1Q9H1A4 1944 aa13.64□□□□□ -0.23
RAPGEF3-218ENST00000548919 GABRR3A8MPY1 467 aa13.64□□□□□ -0.23
RAPGEF3-218ENST00000548919 E9PQ18 207 aa13.64□□□□□ -0.23
RAPGEF3-218ENST00000548919 TNFRSF11BO00300 401 aa13.64□□□□□ -0.23
RAPGEF3-218ENST00000548919 ETHE1O95571 254 aa13.64□□□□□ -0.23
RAPGEF3-218ENST00000548919 CBSLP0DN79 551 aa13.64□□□□□ -0.23
RAPGEF3-218ENST00000548919 LHCGRP22888 699 aa13.64□□□□□ -0.23
RAPGEF3-218ENST00000548919 CBSP35520 551 aa13.64□□□□□ -0.23
RAPGEF3-218ENST00000548919 GGT2P36268 569 aa13.64□□□□□ -0.23
RAPGEF3-218ENST00000548919 STK19P49842 368 aaPredicted RBP13.64□□□□□ -0.23
RAPGEF3-218ENST00000548919 PFN3P60673 137 aa13.64□□□□□ -0.23
RAPGEF3-218ENST00000548919 TUBA1BP68363 451 aa13.64□□□□□ -0.23
RAPGEF3-218ENST00000548919 NKX3-2P78367 333 aa13.64□□□□□ -0.23
RAPGEF3-218ENST00000548919 IRF8Q02556 426 aa13.64□□□□□ -0.23
RAPGEF3-218ENST00000548919 PTSQ03393 145 aa13.64□□□□□ -0.23
RAPGEF3-218ENST00000548919 HKDC1Q2TB90 917 aa13.64□□□□□ -0.23
RAPGEF3-218ENST00000548919 ZNF783Q6ZMS7 281 aa13.64□□□□□ -0.23
RAPGEF3-218ENST00000548919 TUBA1AQ71U36 451 aa13.64□□□□□ -0.23
RAPGEF3-218ENST00000548919 LACC1Q8IV20 430 aa13.64□□□□□ -0.23
RAPGEF3-218ENST00000548919 UTP15Q8TED0 518 aaKnown RBP13.64□□□□□ -0.23
RAPGEF3-218ENST00000548919 DUSP26Q9BV47 211 aa13.64□□□□□ -0.23
RAPGEF3-218ENST00000548919 ROGDIQ9GZN7 287 aa13.64□□□□□ -0.23
RAPGEF3-218ENST00000548919 VPS29Q9UBQ0 182 aa13.64□□□□□ -0.23
RAPGEF3-218ENST00000548919 TMPRSS11EQ9UL52 423 aa13.64□□□□□ -0.23
RAPGEF3-218ENST00000548919 LYVE1Q9Y5Y7 322 aa13.64□□□□□ -0.23
RAPGEF3-218ENST00000548919 TBKBP1A7MCY6 615 aa13.64□□□□□ -0.23
RAPGEF3-218ENST00000548919 CLCA1A8K7I4 914 aa13.64□□□□□ -0.23
RAPGEF3-218ENST00000548919 E7EQ34 232 aa13.64□□□□□ -0.23
RAPGEF3-218ENST00000548919 SSX4O60224 188 aa13.64□□□□□ -0.23
RAPGEF3-218ENST00000548919 MRPS14O60783 128 aaKnown RBP13.64□□□□□ -0.23
RAPGEF3-218ENST00000548919 CDK1P06493 297 aa13.64□□□□□ -0.23
RAPGEF3-218ENST00000548919 CTSOP43234 321 aaPredicted RBP13.64□□□□□ -0.23
RAPGEF3-218ENST00000548919 DGKEP52429 567 aa13.64□□□□□ -0.23
RAPGEF3-218ENST00000548919 PPIGQ13427 754 aaKnown RBP eCLIP13.64□□□□□ -0.23
RAPGEF3-218ENST00000548919 TBCEQ15813 527 aaPredicted RBP13.64□□□□□ -0.23
RAPGEF3-218ENST00000548919 LRIT3Q3SXY7 679 aa13.64□□□□□ -0.23
RAPGEF3-218ENST00000548919 XKR6Q5GH73 641 aa13.64□□□□□ -0.23
RAPGEF3-218ENST00000548919 RGMBQ6NW40 437 aa13.64□□□□□ -0.23
RAPGEF3-218ENST00000548919 USP43Q70EL4 1123 aa13.64□□□□□ -0.23
RAPGEF3-218ENST00000548919 SLC46A3Q7Z3Q1 461 aa13.64□□□□□ -0.23
RAPGEF3-218ENST00000548919 ARL14EPQ8N8R7 260 aaPredicted RBP13.64□□□□□ -0.23
RAPGEF3-218ENST00000548919 HJURPQ8NCD3 748 aaPredicted RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms