RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 ZNF700Q9H0M5 742 aa12.64□□□□□ -0.39
CPSF6-204ENST00000547486 AGPAT4Q9NRZ5 378 aa12.64□□□□□ -0.39
CPSF6-204ENST00000547486 TAS2R13Q9NYV9 303 aa12.64□□□□□ -0.39
CPSF6-204ENST00000547486 SLC5A6Q9Y289 635 aa12.64□□□□□ -0.39
CPSF6-204ENST00000547486 DOCK10Q96BY6 2186 aa12.64□□□□□ -0.39
CPSF6-204ENST00000547486 PCM1Q15154 2024 aa12.64□□□□□ -0.39
CPSF6-204ENST00000547486 NBPF19A0A087WUL8 3843 aa12.63□□□□□ -0.39
CPSF6-204ENST00000547486 IGHV3-20A0A0C4DH32 117 aa12.63□□□□□ -0.39
CPSF6-204ENST00000547486 USP27XA6NNY8 438 aa12.63□□□□□ -0.39
CPSF6-204ENST00000547486 SGK494L7N484 410 aa12.63□□□□□ -0.39
CPSF6-204ENST00000547486 SLC16A5O15375 505 aa12.63□□□□□ -0.39
CPSF6-204ENST00000547486 ZSCAN12O43309 604 aa12.63□□□□□ -0.39
CPSF6-204ENST00000547486 TTC4O95801 387 aa12.63□□□□□ -0.39
CPSF6-204ENST00000547486 F10P00742 488 aa12.63□□□□□ -0.39
CPSF6-204ENST00000547486 ITGAMP11215 1152 aa12.63□□□□□ -0.39
CPSF6-204ENST00000547486 CDH1P12830 882 aa12.63□□□□□ -0.39
CPSF6-204ENST00000547486 ELK3P41970 407 aa12.63□□□□□ -0.39
CPSF6-204ENST00000547486 AVPR1BP47901 424 aa12.63□□□□□ -0.39
CPSF6-204ENST00000547486 RPS15AP62244 130 aaKnown RBP12.63□□□□□ -0.39
CPSF6-204ENST00000547486 NDUFA9Q16795 377 aa12.63□□□□□ -0.39
CPSF6-204ENST00000547486 TMEM214Q6NUQ4 689 aaKnown RBP12.63□□□□□ -0.39
CPSF6-204ENST00000547486 TRMT10BQ6PF06 316 aaKnown RBP12.63□□□□□ -0.39
CPSF6-204ENST00000547486 PCGF5Q86SE9 256 aa12.63□□□□□ -0.39
CPSF6-204ENST00000547486 SLC26A11Q86WA9 606 aa12.63□□□□□ -0.39
CPSF6-204ENST00000547486 PDSS2Q86YH6 399 aa12.63□□□□□ -0.39
CPSF6-204ENST00000547486 OR51Q1Q8NH59 317 aa12.63□□□□□ -0.39
CPSF6-204ENST00000547486 HAS2Q92819 552 aa12.63□□□□□ -0.39
CPSF6-204ENST00000547486 CERS2Q96G23 380 aa12.63□□□□□ -0.39
CPSF6-204ENST00000547486 OR4K3Q96R72 315 aa12.63□□□□□ -0.39
CPSF6-204ENST00000547486 CYTH2Q99418 400 aa12.63□□□□□ -0.39
CPSF6-204ENST00000547486 VN1R1Q9GZP7 353 aa12.63□□□□□ -0.39
CPSF6-204ENST00000547486 PCBD2Q9H0N5 130 aa12.63□□□□□ -0.39
CPSF6-204ENST00000547486 IKZF3Q9UKT9 509 aa12.63□□□□□ -0.39
CPSF6-204ENST00000547486 SPTAN1Q13813 2472 aaKnown RBP12.63□□□□□ -0.39
CPSF6-204ENST00000547486 MDC1Q14676 2089 aaKnown RBP12.62□□□□□ -0.39
CPSF6-204ENST00000547486 NUP210LQ5VU65 1888 aa12.62□□□□□ -0.39
CPSF6-204ENST00000547486 H0YIG0 161 aa12.62□□□□□ -0.39
CPSF6-204ENST00000547486 TP73O15350 636 aa12.62□□□□□ -0.39
CPSF6-204ENST00000547486 DNAJB6O75190 326 aa12.62□□□□□ -0.39
CPSF6-204ENST00000547486 NSA2O95478 260 aaKnown RBP12.62□□□□□ -0.39
CPSF6-204ENST00000547486 C8orf89P0DMQ9 161 aa12.62□□□□□ -0.39
CPSF6-204ENST00000547486 IL1RNP18510 177 aa12.62□□□□□ -0.39
CPSF6-204ENST00000547486 RGS4P49798 205 aa12.62□□□□□ -0.39
CPSF6-204ENST00000547486 TNFSF10P50591 281 aa12.62□□□□□ -0.39
CPSF6-204ENST00000547486 ARG2P78540 354 aa12.62□□□□□ -0.39
CPSF6-204ENST00000547486 MEF2AQ02078 507 aaPredicted RBP12.62□□□□□ -0.39
CPSF6-204ENST00000547486 SP140Q13342 867 aa12.62□□□□□ -0.39
CPSF6-204ENST00000547486 ELOAQ14241 798 aaKnown RBP12.62□□□□□ -0.39
CPSF6-204ENST00000547486 HECTD2Q5U5R9 776 aa12.62□□□□□ -0.39
CPSF6-204ENST00000547486 LRRC8EQ6NSJ5 796 aa12.62□□□□□ -0.39
CPSF6-204ENST00000547486 RPUSD3Q6P087 351 aaKnown RBP12.62□□□□□ -0.39
CPSF6-204ENST00000547486 TMEM207Q6UWW9 146 aa12.62□□□□□ -0.39
CPSF6-204ENST00000547486 KIAA0408Q6ZU52 694 aa12.62□□□□□ -0.39
CPSF6-204ENST00000547486 LANCL3Q6ZV70 420 aa12.62□□□□□ -0.39
CPSF6-204ENST00000547486 CREG2Q8IUH2 290 aa12.62□□□□□ -0.39
CPSF6-204ENST00000547486 KLHL7Q8IXQ5 586 aa12.62□□□□□ -0.39
CPSF6-204ENST00000547486 PALM2Q8IXS6 379 aa12.62□□□□□ -0.39
CPSF6-204ENST00000547486 MYO1HQ8N1T3 1032 aa12.62□□□□□ -0.39
CPSF6-204ENST00000547486 PYCR2Q96C36 320 aa12.62□□□□□ -0.39
CPSF6-204ENST00000547486 THAP11Q96EK4 314 aa12.62□□□□□ -0.39
CPSF6-204ENST00000547486 MOCOSQ96EN8 888 aa12.62□□□□□ -0.39
CPSF6-204ENST00000547486 CFAP36Q96G28 342 aa12.62□□□□□ -0.39
CPSF6-204ENST00000547486 TAAR6Q96RI8 345 aa12.62□□□□□ -0.39
CPSF6-204ENST00000547486 OLFM1Q99784 485 aa12.62□□□□□ -0.39
CPSF6-204ENST00000547486 NAT9Q9BTE0 207 aa12.62□□□□□ -0.39
CPSF6-204ENST00000547486 GRPEL1Q9HAV7 217 aa12.62□□□□□ -0.39
CPSF6-204ENST00000547486 PPANQ9NQ55 473 aaKnown RBP12.62□□□□□ -0.39
CPSF6-204ENST00000547486 RIC8BQ9NVN3 520 aa12.62□□□□□ -0.39
CPSF6-204ENST00000547486 HCN3Q9P1Z3 774 aa12.62□□□□□ -0.39
CPSF6-204ENST00000547486 OSGIN2Q9Y236 505 aa12.62□□□□□ -0.39
CPSF6-204ENST00000547486 VWA7Q9Y334 891 aa12.62□□□□□ -0.39
CPSF6-204ENST00000547486 PCDH17O14917 1159 aa12.61□□□□□ -0.39
CPSF6-204ENST00000547486 WFS1O76024 890 aa12.61□□□□□ -0.39
CPSF6-204ENST00000547486 SEC24DO94855 1032 aaPredicted RBP12.61□□□□□ -0.39
CPSF6-204ENST00000547486 WDPCPO95876 746 aa12.61□□□□□ -0.39
CPSF6-204ENST00000547486 EDN3P14138 238 aa12.61□□□□□ -0.39
CPSF6-204ENST00000547486 TCP1P17987 556 aaKnown RBP12.61□□□□□ -0.39
CPSF6-204ENST00000547486 FDXRP22570 491 aa12.61□□□□□ -0.39
CPSF6-204ENST00000547486 XCR1P46094 333 aa12.61□□□□□ -0.39
CPSF6-204ENST00000547486 IL2P60568 153 aa12.61□□□□□ -0.39
CPSF6-204ENST00000547486 SRSF11Q05519 484 aaKnown RBP12.61□□□□□ -0.39
CPSF6-204ENST00000547486 MINDY4Q4G0A6 757 aa12.61□□□□□ -0.39
CPSF6-204ENST00000547486 ZNF324BQ6AW86 544 aaPredicted RBP12.61□□□□□ -0.39
CPSF6-204ENST00000547486 CAPN13Q6MZZ7 669 aaPredicted RBP12.61□□□□□ -0.39
CPSF6-204ENST00000547486 HIBCHQ6NVY1 386 aaPredicted RBP12.61□□□□□ -0.39
CPSF6-204ENST00000547486 LCTLQ6UWM7 567 aa12.61□□□□□ -0.39
CPSF6-204ENST00000547486 RIPOR1Q6ZS17 1223 aa12.61□□□□□ -0.39
CPSF6-204ENST00000547486 CPEB2Q7Z5Q1 589 aaKnown RBP12.61□□□□□ -0.39
CPSF6-204ENST00000547486 GALNT7Q86SF2 657 aa12.61□□□□□ -0.39
CPSF6-204ENST00000547486 ASPGQ86U10 573 aa12.61□□□□□ -0.39
CPSF6-204ENST00000547486 C17orf64Q86WR6 236 aa12.61□□□□□ -0.39
CPSF6-204ENST00000547486 GPATCH11Q8N954 259 aa12.61□□□□□ -0.39
CPSF6-204ENST00000547486 MFSD9Q8NBP5 474 aa12.61□□□□□ -0.39
CPSF6-204ENST00000547486 CAMKVQ8NCB2 501 aa12.61□□□□□ -0.39
CPSF6-204ENST00000547486 ZNF740Q8NDX6 193 aa12.61□□□□□ -0.39
CPSF6-204ENST00000547486 ABHD11Q8NFV4 315 aa12.61□□□□□ -0.39
CPSF6-204ENST00000547486 OR4K1Q8NGD4 311 aa12.61□□□□□ -0.39
CPSF6-204ENST00000547486 OR56A3Q8NH54 315 aa12.61□□□□□ -0.39
CPSF6-204ENST00000547486 ZCCHC10Q8TBK6 192 aa12.61□□□□□ -0.39
CPSF6-204ENST00000547486 SLC13A3Q8WWT9 602 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms