RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 RAB7BQ96AH8 199 aa11.5□□□□□ -0.57
CCDC38-202ENST00000546386 BIRC7Q96CA5 298 aa11.5□□□□□ -0.57
CCDC38-202ENST00000546386 HOPXQ9BPY8 73 aaPredicted RBP11.5□□□□□ -0.57
CCDC38-202ENST00000546386 C1QTNF2Q9BXJ5 285 aa11.5□□□□□ -0.57
CCDC38-202ENST00000546386 ANKRA2Q9H9E1 313 aa11.5□□□□□ -0.57
CCDC38-202ENST00000546386 PHPT1Q9NRX4 125 aaPredicted RBP11.5□□□□□ -0.57
CCDC38-202ENST00000546386 SUCOQ9UBS9 1254 aaKnown RBP11.5□□□□□ -0.57
CCDC38-202ENST00000546386 RAPGEFL1Q9UHV5 662 aa11.5□□□□□ -0.57
CCDC38-202ENST00000546386 TMCO1Q9UM00 188 aa11.5□□□□□ -0.57
CCDC38-202ENST00000546386 GPR179Q6PRD1 2367 aa11.5□□□□□ -0.57
CCDC38-202ENST00000546386 PRRC2CQ9Y520 2896 aaKnown RBP11.5□□□□□ -0.57
CCDC38-202ENST00000546386 A0A1W2PS29 197 aa11.5□□□□□ -0.57
CCDC38-202ENST00000546386 C7orf72A4D263 438 aa11.5□□□□□ -0.57
CCDC38-202ENST00000546386 ACPPP15309 386 aa11.5□□□□□ -0.57
CCDC38-202ENST00000546386 TRIM23P36406 574 aa11.5□□□□□ -0.57
CCDC38-202ENST00000546386 FOLH1Q04609 750 aa11.5□□□□□ -0.57
CCDC38-202ENST00000546386 ILF2Q12905 390 aaKnown RBP11.5□□□□□ -0.57
CCDC38-202ENST00000546386 NKG7Q16617 165 aa11.5□□□□□ -0.57
CCDC38-202ENST00000546386 TMEM259Q4ZIN3 620 aa11.5□□□□□ -0.57
CCDC38-202ENST00000546386 LRRC23Q53EV4 343 aaPredicted RBP11.5□□□□□ -0.57
CCDC38-202ENST00000546386 TMEM154Q6P9G4 183 aa11.5□□□□□ -0.57
CCDC38-202ENST00000546386 TMIGD1Q6UXZ0 262 aa11.5□□□□□ -0.57
CCDC38-202ENST00000546386 ADAMTSL4Q6UY14 1074 aa11.5□□□□□ -0.57
CCDC38-202ENST00000546386 ZNF438Q7Z4V0 828 aa11.5□□□□□ -0.57
CCDC38-202ENST00000546386 VN1R5Q7Z5H4 357 aa11.5□□□□□ -0.57
CCDC38-202ENST00000546386 GPR180Q86V85 440 aa11.5□□□□□ -0.57
CCDC38-202ENST00000546386 SLC44A2Q8IWA5 706 aaPredicted RBP11.5□□□□□ -0.57
CCDC38-202ENST00000546386 LRRC56Q8IYG6 542 aaPredicted RBP11.5□□□□□ -0.57
CCDC38-202ENST00000546386 FBXL6Q8N531 539 aa11.5□□□□□ -0.57
CCDC38-202ENST00000546386 OR2T34Q8NGX1 318 aa11.5□□□□□ -0.57
CCDC38-202ENST00000546386 OR5K2Q8NHB8 316 aa11.5□□□□□ -0.57
CCDC38-202ENST00000546386 NETO1Q8TDF5 533 aa11.5□□□□□ -0.57
CCDC38-202ENST00000546386 JADE3Q92613 823 aa11.5□□□□□ -0.57
CCDC38-202ENST00000546386 RAD51AP1Q96B01 352 aa11.5□□□□□ -0.57
CCDC38-202ENST00000546386 VPS50Q96JG6 964 aa11.5□□□□□ -0.57
CCDC38-202ENST00000546386 ANKRD27Q96NW4 1050 aa11.5□□□□□ -0.57
CCDC38-202ENST00000546386 KLHL31Q9H511 634 aa11.5□□□□□ -0.57
CCDC38-202ENST00000546386 GPR34Q9UPC5 381 aa11.5□□□□□ -0.57
CCDC38-202ENST00000546386 SNX8Q9Y5X2 465 aa11.5□□□□□ -0.57
CCDC38-202ENST00000546386 IGKV1-8A0A0C4DH67 115 aa11.49□□□□□ -0.57
CCDC38-202ENST00000546386 PLOD2O00469 737 aa11.49□□□□□ -0.57
CCDC38-202ENST00000546386 GSTA4O15217 222 aa11.49□□□□□ -0.57
CCDC38-202ENST00000546386 PCDH7O60245 1069 aa11.49□□□□□ -0.57
CCDC38-202ENST00000546386 GNAO1P09471 354 aa11.49□□□□□ -0.57
CCDC38-202ENST00000546386 C1GALT1C1LP0DN25 315 aa11.49□□□□□ -0.57
CCDC38-202ENST00000546386 TNFRSF1BP20333 461 aa11.49□□□□□ -0.57
CCDC38-202ENST00000546386 PRKACGP22612 351 aa11.49□□□□□ -0.57
CCDC38-202ENST00000546386 EIF2DP41214 584 aaKnown RBP11.49□□□□□ -0.57
CCDC38-202ENST00000546386 TNFRSF4P43489 277 aa11.49□□□□□ -0.57
CCDC38-202ENST00000546386 ZNF750Q32MQ0 723 aa11.49□□□□□ -0.57
CCDC38-202ENST00000546386 ZIK1Q3SY52 487 aaPredicted RBP11.49□□□□□ -0.57
CCDC38-202ENST00000546386 TCAIMQ8N3R3 496 aa11.49□□□□□ -0.57
CCDC38-202ENST00000546386 TMEM102Q8N9M5 508 aaPredicted RBP11.49□□□□□ -0.57
CCDC38-202ENST00000546386 OR2T12Q8NG77 320 aa11.49□□□□□ -0.57
CCDC38-202ENST00000546386 OR13H1Q8NG92 308 aa11.49□□□□□ -0.57
CCDC38-202ENST00000546386 ATL1Q8WXF7 558 aa11.49□□□□□ -0.57
CCDC38-202ENST00000546386 TOE1Q96GM8 510 aaKnown RBP11.49□□□□□ -0.57
CCDC38-202ENST00000546386 ABCD2Q9UBJ2 740 aa11.49□□□□□ -0.57
CCDC38-202ENST00000546386 EXO1Q9UQ84 846 aaKnown RBP11.49□□□□□ -0.57
CCDC38-202ENST00000546386 KIAA1549LQ6ZVL6 1849 aa11.49□□□□□ -0.57
CCDC38-202ENST00000546386 PRSS38A1L453 326 aa11.49□□□□□ -0.57
CCDC38-202ENST00000546386 BBIP1A8MTZ0 92 aa11.49□□□□□ -0.57
CCDC38-202ENST00000546386 QSOX1O00391 747 aa11.49□□□□□ -0.57
CCDC38-202ENST00000546386 FPGTO14772 594 aa11.49□□□□□ -0.57
CCDC38-202ENST00000546386 KMOO15229 486 aa11.49□□□□□ -0.57
CCDC38-202ENST00000546386 SLC16A5O15375 505 aa11.49□□□□□ -0.57
CCDC38-202ENST00000546386 TBX6O95947 436 aaPredicted RBP11.49□□□□□ -0.57
CCDC38-202ENST00000546386 OPN1SWP03999 348 aa11.49□□□□□ -0.57
CCDC38-202ENST00000546386 KIR3DL1P43629 444 aa11.49□□□□□ -0.57
CCDC38-202ENST00000546386 RAB8AP61006 207 aa11.49□□□□□ -0.57
CCDC38-202ENST00000546386 PPP1CAP62136 330 aa11.49□□□□□ -0.57
CCDC38-202ENST00000546386 PLOD1Q02809 727 aaPredicted RBP11.49□□□□□ -0.57
CCDC38-202ENST00000546386 PWP1Q13610 501 aa11.49□□□□□ -0.57
CCDC38-202ENST00000546386 ZCCHC8Q6NZY4 707 aaKnown RBP11.49□□□□□ -0.57
CCDC38-202ENST00000546386 AAGABQ6PD74 315 aa11.49□□□□□ -0.57
CCDC38-202ENST00000546386 TBPL2Q6SJ96 375 aa11.49□□□□□ -0.57
CCDC38-202ENST00000546386 NXPE4Q6UWF7 544 aa11.49□□□□□ -0.57
CCDC38-202ENST00000546386 PDSS2Q86YH6 399 aa11.49□□□□□ -0.57
CCDC38-202ENST00000546386 OR52E1Q8NGJ3 308 aa11.49□□□□□ -0.57
CCDC38-202ENST00000546386 CMTM7Q96FZ5 175 aa11.49□□□□□ -0.57
CCDC38-202ENST00000546386 C19orf43Q9BQ61 176 aa11.49□□□□□ -0.57
CCDC38-202ENST00000546386 C17orf62Q9BQA9 187 aa11.49□□□□□ -0.57
CCDC38-202ENST00000546386 BTBD1Q9H0C5 482 aa11.49□□□□□ -0.57
CCDC38-202ENST00000546386 MIR1-1HGQ9H1L0 117 aa11.49□□□□□ -0.57
CCDC38-202ENST00000546386 OAZ3Q9UMX2 235 aa11.49□□□□□ -0.57
CCDC38-202ENST00000546386 PCDHGA11Q9Y5H2 935 aa11.49□□□□□ -0.57
CCDC38-202ENST00000546386 MDC1Q14676 2089 aaKnown RBP11.49□□□□□ -0.57
CCDC38-202ENST00000546386 PRSS51A0A1B0GVH4 220 aa11.48□□□□□ -0.57
CCDC38-202ENST00000546386 CACNB4O00305 520 aaPredicted RBP11.48□□□□□ -0.57
CCDC38-202ENST00000546386 ZNF682O95780 498 aa11.48□□□□□ -0.57
CCDC38-202ENST00000546386 SRSF5Q13243 272 aaKnown RBP11.48□□□□□ -0.57
CCDC38-202ENST00000546386 LIPJQ5W064 366 aa11.48□□□□□ -0.57
CCDC38-202ENST00000546386 GRHL2Q6ISB3 625 aa11.48□□□□□ -0.57
CCDC38-202ENST00000546386 Q6ZSR6 202 aa11.48□□□□□ -0.57
CCDC38-202ENST00000546386 CBR4Q8N4T8 237 aa11.48□□□□□ -0.57
CCDC38-202ENST00000546386 GABRG3Q99928 467 aa11.48□□□□□ -0.57
CCDC38-202ENST00000546386 SLC29A3Q9BZD2 475 aa11.48□□□□□ -0.57
CCDC38-202ENST00000546386 UBAP1Q9NZ09 502 aa11.48□□□□□ -0.57
CCDC38-202ENST00000546386 NFKBIL1Q9UBC1 381 aaPredicted RBP11.48□□□□□ -0.57
CCDC38-202ENST00000546386 ADGRE2Q9UHX3 823 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms