RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 CHRNA6Q15825 494 aa8.46□□□□□ -1.06
TDP1-204ENST00000545686 C10orf62Q5T681 223 aaPredicted RBP8.46□□□□□ -1.06
TDP1-204ENST00000545686 THOC7Q6I9Y2 204 aaKnown RBP8.46□□□□□ -1.06
TDP1-204ENST00000545686 GPR153Q6NV75 609 aa8.46□□□□□ -1.06
TDP1-204ENST00000545686 ZNF544Q6NX49 715 aa8.46□□□□□ -1.06
TDP1-204ENST00000545686 C19orf48Q6RUI8 117 aa8.46□□□□□ -1.06
TDP1-204ENST00000545686 TPGS1Q6ZTW0 290 aa8.46□□□□□ -1.06
TDP1-204ENST00000545686 UBE2R2Q712K3 238 aaPredicted RBP8.46□□□□□ -1.06
TDP1-204ENST00000545686 CAMKMTQ7Z624 323 aa8.46□□□□□ -1.06
TDP1-204ENST00000545686 ZNF605Q86T29 641 aa8.46□□□□□ -1.06
TDP1-204ENST00000545686 CCDC190Q86UF4 302 aa8.46□□□□□ -1.06
TDP1-204ENST00000545686 RTN4RL1Q86UN2 441 aaPredicted RBP8.46□□□□□ -1.06
TDP1-204ENST00000545686 HEATR4Q86WZ0 1026 aa8.46□□□□□ -1.06
TDP1-204ENST00000545686 SLC7A5P1Q8MH63 180 aa8.46□□□□□ -1.06
TDP1-204ENST00000545686 DCAF4L2Q8NA75 395 aa8.46□□□□□ -1.06
TDP1-204ENST00000545686 FLCNQ8NFG4 579 aa8.46□□□□□ -1.06
TDP1-204ENST00000545686 EGLN2Q96KS0 407 aa8.46□□□□□ -1.06
TDP1-204ENST00000545686 KCNC2Q96PR1 638 aa8.46□□□□□ -1.06
TDP1-204ENST00000545686 RUBCNLQ9H714 662 aa8.46□□□□□ -1.06
TDP1-204ENST00000545686 TPT1P8Q9HAU6 139 aa8.46□□□□□ -1.06
TDP1-204ENST00000545686 RBMX2Q9Y388 322 aaKnown RBP8.46□□□□□ -1.06
TDP1-204ENST00000545686 GRIP1Q9Y3R0 1128 aa8.46□□□□□ -1.06
TDP1-204ENST00000545686 PCDHGA2Q9Y5H1 932 aa8.46□□□□□ -1.06
TDP1-204ENST00000545686 PCM1Q15154 2024 aa8.46□□□□□ -1.06
TDP1-204ENST00000545686 HELZP42694 1942 aaKnown RBP8.46□□□□□ -1.06
TDP1-204ENST00000545686 A0A075B6Q4 140 aa8.45□□□□□ -1.06
TDP1-204ENST00000545686 PSMD11O00231 422 aa8.45□□□□□ -1.06
TDP1-204ENST00000545686 TLL1O43897 1013 aa8.45□□□□□ -1.06
TDP1-204ENST00000545686 ADAMTS4O75173 837 aa8.45□□□□□ -1.06
TDP1-204ENST00000545686 PARNO95453 639 aaKnown RBP8.45□□□□□ -1.06
TDP1-204ENST00000545686 HIST1H2AGP0C0S8 130 aaPredicted RBP8.45□□□□□ -1.06
TDP1-204ENST00000545686 HSD3B1P14060 373 aa8.45□□□□□ -1.06
TDP1-204ENST00000545686 JUPP14923 745 aa8.45□□□□□ -1.06
TDP1-204ENST00000545686 HIST1H2ADP20671 130 aa8.45□□□□□ -1.06
TDP1-204ENST00000545686 HSD3B2P26439 372 aa8.45□□□□□ -1.06
TDP1-204ENST00000545686 AOAHP28039 575 aa8.45□□□□□ -1.06
TDP1-204ENST00000545686 GTF2E2P29084 291 aaKnown RBP8.45□□□□□ -1.06
TDP1-204ENST00000545686 BMPR1AP36894 532 aa8.45□□□□□ -1.06
TDP1-204ENST00000545686 ASMTP46597 345 aa8.45□□□□□ -1.06
TDP1-204ENST00000545686 NEK2P51955 445 aa8.45□□□□□ -1.06
TDP1-204ENST00000545686 CRYBA2P53672 197 aa8.45□□□□□ -1.06
TDP1-204ENST00000545686 AP1S2P56377 157 aa8.45□□□□□ -1.06
TDP1-204ENST00000545686 PPIGQ13427 754 aaKnown RBP eCLIP8.45□□□□□ -1.06
TDP1-204ENST00000545686 ATXN7L2Q5T6C5 722 aaPredicted RBP8.45□□□□□ -1.06
TDP1-204ENST00000545686 LIPJQ5W064 366 aa8.45□□□□□ -1.06
TDP1-204ENST00000545686 C16orf59Q7L2K0 433 aa8.45□□□□□ -1.06
TDP1-204ENST00000545686 GDPD3Q7L5L3 318 aa8.45□□□□□ -1.06
TDP1-204ENST00000545686 GALNT10Q86SR1 603 aa8.45□□□□□ -1.06
TDP1-204ENST00000545686 CCDC103Q8IW40 242 aa8.45□□□□□ -1.06
TDP1-204ENST00000545686 SYTL1Q8IYJ3 562 aa8.45□□□□□ -1.06
TDP1-204ENST00000545686 STX19Q8N4C7 294 aa8.45□□□□□ -1.06
TDP1-204ENST00000545686 IL17RDQ8NFM7 739 aa8.45□□□□□ -1.06
TDP1-204ENST00000545686 OR10G2Q8NGC3 310 aa8.45□□□□□ -1.06
TDP1-204ENST00000545686 OR4C15Q8NGM1 316 aa8.45□□□□□ -1.06
TDP1-204ENST00000545686 LINC01599Q8WXQ3 324 aa8.45□□□□□ -1.06
TDP1-204ENST00000545686 TMCO6Q96DC7 493 aa8.45□□□□□ -1.06
TDP1-204ENST00000545686 TPD52L3Q96J77 140 aa8.45□□□□□ -1.06
TDP1-204ENST00000545686 HIST1H2AHQ96KK5 128 aa8.45□□□□□ -1.06
TDP1-204ENST00000545686 HIST1H2AJQ99878 128 aa8.45□□□□□ -1.06
TDP1-204ENST00000545686 H2AFJQ9BTM1 129 aa8.45□□□□□ -1.06
TDP1-204ENST00000545686 GPR62Q9BZJ7 368 aa8.45□□□□□ -1.06
TDP1-204ENST00000545686 NEK6Q9HC98 313 aa8.45□□□□□ -1.06
TDP1-204ENST00000545686 CCDC177Q9NQR7 707 aaPredicted RBP8.45□□□□□ -1.06
TDP1-204ENST00000545686 DNAJC11Q9NVH1 559 aa8.45□□□□□ -1.06
TDP1-204ENST00000545686 ZDHHC3Q9NYG2 299 aa8.45□□□□□ -1.06
TDP1-204ENST00000545686 CNOT2Q9NZN8 540 aaKnown RBP8.45□□□□□ -1.06
TDP1-204ENST00000545686 CRNNQ9UBG3 495 aaPredicted RBP8.45□□□□□ -1.06
TDP1-204ENST00000545686 FCF1Q9Y324 198 aaKnown RBP8.45□□□□□ -1.06
TDP1-204ENST00000545686 OR51B4Q9Y5P0 310 aa8.45□□□□□ -1.06
TDP1-204ENST00000545686 LOC100506127A0A0U1RQW1 187 aa8.45□□□□□ -1.06
TDP1-204ENST00000545686 C1orf226A1L170 272 aa8.45□□□□□ -1.06
TDP1-204ENST00000545686 SH3D21A4FU49 640 aa8.45□□□□□ -1.06
TDP1-204ENST00000545686 EFCAB10A6NFE3 127 aa8.45□□□□□ -1.06
TDP1-204ENST00000545686 TNFRSF11BO00300 401 aa8.45□□□□□ -1.06
TDP1-204ENST00000545686 SCAMP2O15127 329 aaKnown RBP8.45□□□□□ -1.06
TDP1-204ENST00000545686 KMOO15229 486 aa8.45□□□□□ -1.06
TDP1-204ENST00000545686 MPZL2O60487 215 aa8.45□□□□□ -1.06
TDP1-204ENST00000545686 VIPP01282 170 aa8.45□□□□□ -1.06
TDP1-204ENST00000545686 KRT8P05787 483 aa8.45□□□□□ -1.06
TDP1-204ENST00000545686 ASGR1P07306 291 aa8.45□□□□□ -1.06
TDP1-204ENST00000545686 POLR2EP19388 210 aaKnown RBP8.45□□□□□ -1.06
TDP1-204ENST00000545686 GRK5P34947 590 aa8.45□□□□□ -1.06
TDP1-204ENST00000545686 BCL2L1Q07817 233 aa8.45□□□□□ -1.06
TDP1-204ENST00000545686 ARMCX4Q5H9R4 360 aa8.45□□□□□ -1.06
TDP1-204ENST00000545686 ANXA8L1Q5VT79 327 aa8.45□□□□□ -1.06
TDP1-204ENST00000545686 RSPO2Q6UXX9 243 aaPredicted RBP8.45□□□□□ -1.06
TDP1-204ENST00000545686 ANKS3Q6ZW76 656 aa8.45□□□□□ -1.06
TDP1-204ENST00000545686 SLC22A15Q8IZD6 547 aa8.45□□□□□ -1.06
TDP1-204ENST00000545686 HJURPQ8NCD3 748 aaPredicted RBP8.45□□□□□ -1.06
TDP1-204ENST00000545686 C11orf65Q8NCR3 313 aa8.45□□□□□ -1.06
TDP1-204ENST00000545686 TTC16Q8NEE8 873 aa8.45□□□□□ -1.06
TDP1-204ENST00000545686 SNX18Q96RF0 628 aa8.45□□□□□ -1.06
TDP1-204ENST00000545686 LYSMD1Q96S90 227 aa8.45□□□□□ -1.06
TDP1-204ENST00000545686 FEVQ99581 238 aa8.45□□□□□ -1.06
TDP1-204ENST00000545686 DPH2Q9BQC3 489 aaPredicted RBP8.45□□□□□ -1.06
TDP1-204ENST00000545686 CDCA4Q9BXL8 241 aa8.45□□□□□ -1.06
TDP1-204ENST00000545686 NUAK2Q9H093 628 aa8.45□□□□□ -1.06
TDP1-204ENST00000545686 C3orf14Q9HBI5 128 aa8.45□□□□□ -1.06
TDP1-204ENST00000545686 THSD1Q9NS62 852 aa8.45□□□□□ -1.06
TDP1-204ENST00000545686 FZD4Q9ULV1 537 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms