RNA–Protein interactions for RNA: ENST00000545115.5

DDX11-228, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-228ENST00000545115 CPNE9Q8IYJ1 553 aa13.36□□□□□ -0.27
DDX11-228ENST00000545115 DNAJB8Q8NHS0 232 aa13.36□□□□□ -0.27
DDX11-228ENST00000545115 THAP11Q96EK4 314 aa13.36□□□□□ -0.27
DDX11-228ENST00000545115 PCBD2Q9H0N5 130 aa13.36□□□□□ -0.27
DDX11-228ENST00000545115 C20orf96Q9NUD7 363 aaPredicted RBP13.36□□□□□ -0.27
DDX11-228ENST00000545115 STMN3Q9NZ72 180 aa13.36□□□□□ -0.27
DDX11-228ENST00000545115 COPG2Q9UBF2 871 aa13.36□□□□□ -0.27
DDX11-228ENST00000545115 ARHGAP10A1A4S6 786 aa13.35□□□□□ -0.27
DDX11-228ENST00000545115 GOLGA8MH3BSY2 632 aa13.35□□□□□ -0.27
DDX11-228ENST00000545115 PRAMEF2O60811 474 aa13.35□□□□□ -0.27
DDX11-228ENST00000545115 SEC24DO94855 1032 aaPredicted RBP13.35□□□□□ -0.27
DDX11-228ENST00000545115 UNC5CO95185 931 aa13.35□□□□□ -0.27
DDX11-228ENST00000545115 IL1RNP18510 177 aa13.35□□□□□ -0.27
DDX11-228ENST00000545115 MAGEA3P43357 314 aa13.35□□□□□ -0.27
DDX11-228ENST00000545115 XCR1P46094 333 aa13.35□□□□□ -0.27
DDX11-228ENST00000545115 PTK6Q13882 451 aa13.35□□□□□ -0.27
DDX11-228ENST00000545115 NAA30Q147X3 362 aaPredicted RBP13.35□□□□□ -0.27
DDX11-228ENST00000545115 BTBD16Q32M84 506 aa13.35□□□□□ -0.27
DDX11-228ENST00000545115 SP5Q6BEB4 398 aaPredicted RBP13.35□□□□□ -0.27
DDX11-228ENST00000545115 PLAG1Q6DJT9 500 aa13.35□□□□□ -0.27
DDX11-228ENST00000545115 TMEM214Q6NUQ4 689 aaKnown RBP13.35□□□□□ -0.27
DDX11-228ENST00000545115 TMEM207Q6UWW9 146 aa13.35□□□□□ -0.27
DDX11-228ENST00000545115 LANCL3Q6ZV70 420 aa13.35□□□□□ -0.27
DDX11-228ENST00000545115 PRSS41Q7RTY9 318 aa13.35□□□□□ -0.27
DDX11-228ENST00000545115 SPNS2Q8IVW8 549 aa13.35□□□□□ -0.27
DDX11-228ENST00000545115 CAMKVQ8NCB2 501 aa13.35□□□□□ -0.27
DDX11-228ENST00000545115 OR51Q1Q8NH59 317 aa13.35□□□□□ -0.27
DDX11-228ENST00000545115 MAGOHBQ96A72 148 aaKnown RBP13.35□□□□□ -0.27
DDX11-228ENST00000545115 CYTH2Q99418 400 aa13.35□□□□□ -0.27
DDX11-228ENST00000545115 FAM167BQ9BTA0 163 aa13.35□□□□□ -0.27
DDX11-228ENST00000545115 AARSD1Q9BTE6 412 aaKnown RBP13.35□□□□□ -0.27
DDX11-228ENST00000545115 SUCOQ9UBS9 1254 aaKnown RBP13.35□□□□□ -0.27
DDX11-228ENST00000545115 FBXO5Q9UKT4 447 aa13.35□□□□□ -0.27
DDX11-228ENST00000545115 MAD1L1Q9Y6D9 718 aa13.35□□□□□ -0.27
DDX11-228ENST00000545115 CENPEQ02224 2701 aa13.34□□□□□ -0.27
DDX11-228ENST00000545115 TRGV8A0A0C4DH27 118 aa13.34□□□□□ -0.27
DDX11-228ENST00000545115 IGHV3-20A0A0C4DH32 117 aa13.34□□□□□ -0.27
DDX11-228ENST00000545115 HAUS5O94927 633 aa13.34□□□□□ -0.27
DDX11-228ENST00000545115 BCL6P41182 706 aa13.34□□□□□ -0.27
DDX11-228ENST00000545115 AGTR2P50052 363 aa13.34□□□□□ -0.27
DDX11-228ENST00000545115 CSNK1G2P78368 415 aa13.34□□□□□ -0.27
DDX11-228ENST00000545115 MPP1Q00013 466 aa13.34□□□□□ -0.27
DDX11-228ENST00000545115 SP140Q13342 867 aa13.34□□□□□ -0.27
DDX11-228ENST00000545115 ART3Q13508 389 aa13.34□□□□□ -0.27
DDX11-228ENST00000545115 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.34□□□□□ -0.27
DDX11-228ENST00000545115 UGT3A1Q6NUS8 523 aa13.34□□□□□ -0.27
DDX11-228ENST00000545115 PCGF5Q86SE9 256 aa13.34□□□□□ -0.27
DDX11-228ENST00000545115 C17orf64Q86WR6 236 aa13.34□□□□□ -0.27
DDX11-228ENST00000545115 SRRM1Q8IYB3 904 aaKnown RBP13.34□□□□□ -0.27
DDX11-228ENST00000545115 RASGEF1CQ8N431 466 aa13.34□□□□□ -0.27
DDX11-228ENST00000545115 AMER2Q8N7J2 671 aa13.34□□□□□ -0.27
DDX11-228ENST00000545115 CCDC138Q96M89 665 aa13.34□□□□□ -0.27
DDX11-228ENST00000545115 FAM129AQ9BZQ8 928 aa13.34□□□□□ -0.27
DDX11-228ENST00000545115 ANKHQ9HCJ1 492 aa13.34□□□□□ -0.27
DDX11-228ENST00000545115 HCN3Q9P1Z3 774 aa13.34□□□□□ -0.27
DDX11-228ENST00000545115 SEC14L3Q9UDX4 400 aa13.34□□□□□ -0.27
DDX11-228ENST00000545115 TRMT6Q9UJA5 497 aaKnown RBP13.34□□□□□ -0.27
DDX11-228ENST00000545115 KLF2Q9Y5W3 355 aaPredicted RBP13.34□□□□□ -0.27
DDX11-228ENST00000545115 CELSR2Q9HCU4 2923 aa13.33□□□□□ -0.27
DDX11-228ENST00000545115 CRYBG3Q68DQ2 2970 aa13.33□□□□□ -0.28
DDX11-228ENST00000545115 FEZF1A0PJY2 475 aa13.33□□□□□ -0.28
DDX11-228ENST00000545115 A8MUI8 341 aa13.33□□□□□ -0.28
DDX11-228ENST00000545115 SGK494L7N484 410 aa13.33□□□□□ -0.28
DDX11-228ENST00000545115 C8GP07360 202 aa13.33□□□□□ -0.28
DDX11-228ENST00000545115 PRF1P14222 555 aa13.33□□□□□ -0.28
DDX11-228ENST00000545115 CCND1P24385 295 aa13.33□□□□□ -0.28
DDX11-228ENST00000545115 MST1P26927 711 aa13.33□□□□□ -0.28
DDX11-228ENST00000545115 GRK3P35626 688 aa13.33□□□□□ -0.28
DDX11-228ENST00000545115 COILP38432 576 aaPredicted RBP13.33□□□□□ -0.28
DDX11-228ENST00000545115 CA7P43166 264 aa13.33□□□□□ -0.28
DDX11-228ENST00000545115 RGS4P49798 205 aa13.33□□□□□ -0.28
DDX11-228ENST00000545115 RBPJQ06330 500 aa13.33□□□□□ -0.28
DDX11-228ENST00000545115 HSP90AA5PQ58FG0 334 aa13.33□□□□□ -0.28
DDX11-228ENST00000545115 ZNF766Q5HY98 468 aa13.33□□□□□ -0.28
DDX11-228ENST00000545115 H3F3CQ6NXT2 135 aa13.33□□□□□ -0.28
DDX11-228ENST00000545115 MTFR2Q6P444 385 aa13.33□□□□□ -0.28
DDX11-228ENST00000545115 CCDC137Q6PK04 289 aaKnown RBP13.33□□□□□ -0.28
DDX11-228ENST00000545115 AGTRAPQ6RW13 159 aa13.33□□□□□ -0.28
DDX11-228ENST00000545115 ANKRD37Q7Z713 158 aa13.33□□□□□ -0.28
DDX11-228ENST00000545115 ASPGQ86U10 573 aa13.33□□□□□ -0.28
DDX11-228ENST00000545115 PALM2Q8IXS6 379 aa13.33□□□□□ -0.28
DDX11-228ENST00000545115 AGGF1Q8N302 714 aaeCLIP13.33□□□□□ -0.28
DDX11-228ENST00000545115 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.33□□□□□ -0.28
DDX11-228ENST00000545115 ZCCHC10Q8TBK6 192 aa13.33□□□□□ -0.28
DDX11-228ENST00000545115 ITLN2Q8WWU7 325 aaPredicted RBP13.33□□□□□ -0.28
DDX11-228ENST00000545115 TM4SF19Q96DZ7 209 aa13.33□□□□□ -0.28
DDX11-228ENST00000545115 CCDC120Q96HB5 630 aa13.33□□□□□ -0.28
DDX11-228ENST00000545115 SIGLEC10Q96LC7 697 aa13.33□□□□□ -0.28
DDX11-228ENST00000545115 ZNF354BQ96LW1 612 aa13.33□□□□□ -0.28
DDX11-228ENST00000545115 MACROD1Q9BQ69 325 aa13.33□□□□□ -0.28
DDX11-228ENST00000545115 RUBCNLQ9H714 662 aa13.33□□□□□ -0.28
DDX11-228ENST00000545115 ADAMTS6Q9UKP5 1117 aa13.33□□□□□ -0.28
DDX11-228ENST00000545115 SH2B3Q9UQQ2 575 aa13.33□□□□□ -0.28
DDX11-228ENST00000545115 PDE10AQ9Y233 779 aa13.33□□□□□ -0.28
DDX11-228ENST00000545115 NEU2Q9Y3R4 380 aa13.33□□□□□ -0.28
DDX11-228ENST00000545115 PCDHGB6Q9Y5F9 930 aa13.33□□□□□ -0.28
DDX11-228ENST00000545115 CCL21O00585 134 aa13.32□□□□□ -0.28
DDX11-228ENST00000545115 SLC35G6P0C7Q6 338 aa13.32□□□□□ -0.28
DDX11-228ENST00000545115 PMP22Q01453 160 aa13.32□□□□□ -0.28
DDX11-228ENST00000545115 SRSF11Q05519 484 aaKnown RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms