RNA–Protein interactions for RNA: ENST00000542502.5

MDM2-228, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-228ENST00000542502 TIAL1Q01085 375 aaKnown RBP eCLIP4.36□□□□□ -1.713e-6■■■■□ 19.3
MDM2-228ENST00000542502 OTUD4Q01804 1114 aaKnown RBP4.36□□□□□ -1.71
MDM2-228ENST00000542502 ILF2Q12905 390 aaKnown RBP4.36□□□□□ -1.71
MDM2-228ENST00000542502 DHX34Q14147 1143 aaKnown RBP4.36□□□□□ -1.71
MDM2-228ENST00000542502 PARP6Q2NL67 630 aa4.36□□□□□ -1.71
MDM2-228ENST00000542502 SETMARQ53H47 684 aaPredicted RBP4.36□□□□□ -1.71
MDM2-228ENST00000542502 ARMC12Q5T9G4 340 aa4.36□□□□□ -1.71
MDM2-228ENST00000542502 LIN54Q6MZP7 749 aa4.36□□□□□ -1.71
MDM2-228ENST00000542502 KIAA1324Q6UXG2 1013 aaKnown RBP4.36□□□□□ -1.71
MDM2-228ENST00000542502 LINGO4Q6UY18 593 aa4.36□□□□□ -1.71
MDM2-228ENST00000542502 Q6ZS52 159 aa4.36□□□□□ -1.71
MDM2-228ENST00000542502 ERN2Q76MJ5 926 aaKnown RBP4.36□□□□□ -1.71
MDM2-228ENST00000542502 LPCAT2Q7L5N7 544 aa4.36□□□□□ -1.71
MDM2-228ENST00000542502 GSTA5Q7RTV2 222 aa4.36□□□□□ -1.71
MDM2-228ENST00000542502 PID1Q7Z2X4 250 aa4.36□□□□□ -1.71
MDM2-228ENST00000542502 PCGF5Q86SE9 256 aa4.36□□□□□ -1.71
MDM2-228ENST00000542502 PRPF39Q86UA1 669 aaKnown RBP4.36□□□□□ -1.71
MDM2-228ENST00000542502 SLC35F6Q8N357 371 aa4.36□□□□□ -1.71
MDM2-228ENST00000542502 HDDC3Q8N4P3 179 aa4.36□□□□□ -1.71
MDM2-228ENST00000542502 NPWQ8N729 165 aa4.36□□□□□ -1.71
MDM2-228ENST00000542502 OR2T34Q8NGX1 318 aa4.36□□□□□ -1.71
MDM2-228ENST00000542502 GABPB2Q8TAK5 448 aaPredicted RBP4.36□□□□□ -1.71
MDM2-228ENST00000542502 CEP76Q8TAP6 659 aa4.36□□□□□ -1.71
MDM2-228ENST00000542502 RTP4Q96DX8 246 aa4.36□□□□□ -1.71
MDM2-228ENST00000542502 P2RY11Q96G91 374 aa4.36□□□□□ -1.71
MDM2-228ENST00000542502 CELF6Q96J87 481 aaKnown RBP4.36□□□□□ -1.71
MDM2-228ENST00000542502 FEM1CQ96JP0 617 aa4.36□□□□□ -1.71
MDM2-228ENST00000542502 SPATA13Q96N96 652 aa4.36□□□□□ -1.71
MDM2-228ENST00000542502 FCRL5Q96RD9 977 aa4.36□□□□□ -1.71
MDM2-228ENST00000542502 LGMNQ99538 433 aa4.36□□□□□ -1.71
MDM2-228ENST00000542502 SORBS1Q9BX66 1292 aaKnown RBP4.36□□□□□ -1.71
MDM2-228ENST00000542502 TSPYL1Q9H0U9 437 aa4.36□□□□□ -1.71
MDM2-228ENST00000542502 SLC25A32Q9H2D1 315 aa4.36□□□□□ -1.71
MDM2-228ENST00000542502 PABPC3Q9H361 631 aaKnown RBP4.36□□□□□ -1.71
MDM2-228ENST00000542502 GOLPH3Q9H4A6 298 aa4.36□□□□□ -1.71
MDM2-228ENST00000542502 NT5MQ9NPB1 228 aa4.36□□□□□ -1.71
MDM2-228ENST00000542502 ETNK2Q9NVF9 386 aa4.36□□□□□ -1.71
MDM2-228ENST00000542502 FBXL12Q9NXK8 326 aa4.36□□□□□ -1.71
MDM2-228ENST00000542502 PAK5Q9P286 719 aa4.36□□□□□ -1.71
MDM2-228ENST00000542502 KLHL8Q9P2G9 620 aaPredicted RBP4.36□□□□□ -1.71
MDM2-228ENST00000542502 FAM153AQ9UHL3 310 aa4.36□□□□□ -1.71
MDM2-228ENST00000542502 TFR2Q9UP52 801 aa4.36□□□□□ -1.71
MDM2-228ENST00000542502 DTNAQ9Y4J8 743 aa4.36□□□□□ -1.71
MDM2-228ENST00000542502 PCDHGA5Q9Y5G8 931 aa4.36□□□□□ -1.71
MDM2-228ENST00000542502 NYNRINQ9P2P1 1898 aaKnown RBP4.36□□□□□ -1.71
MDM2-228ENST00000542502 ANKRD36A6QL64 1941 aa4.36□□□□□ -1.71
MDM2-228ENST00000542502 FANCMQ8IYD8 2048 aa4.36□□□□□ -1.71
MDM2-228ENST00000542502 CACNA1EQ15878 2313 aa4.35□□□□□ -1.71
MDM2-228ENST00000542502 MUC22E2RYF6 1773 aaPredicted RBP4.35□□□□□ -1.71
MDM2-228ENST00000542502 TSPAN11A1L157 253 aa4.35□□□□□ -1.71
MDM2-228ENST00000542502 MAGEB16A2A368 324 aa4.35□□□□□ -1.71
MDM2-228ENST00000542502 EME2A4GXA9 379 aaPredicted RBP4.35□□□□□ -1.71
MDM2-228ENST00000542502 OR2W5A6NFC9 320 aa4.35□□□□□ -1.71
MDM2-228ENST00000542502 C16orf96A6NNT2 1141 aa4.35□□□□□ -1.71
MDM2-228ENST00000542502 E7EVH7 732 aa4.35□□□□□ -1.71
MDM2-228ENST00000542502 AGPSO00116 658 aa4.35□□□□□ -1.71
MDM2-228ENST00000542502 KCNK1O00180 336 aa4.35□□□□□ -1.71
MDM2-228ENST00000542502 RNF103O00237 685 aa4.35□□□□□ -1.71
MDM2-228ENST00000542502 KCNN4O15554 427 aa4.35□□□□□ -1.71
MDM2-228ENST00000542502 PLRG1O43660 514 aaKnown RBP4.35□□□□□ -1.71
MDM2-228ENST00000542502 LIASO43766 372 aa4.35□□□□□ -1.71
MDM2-228ENST00000542502 COQ9O75208 318 aa4.35□□□□□ -1.71
MDM2-228ENST00000542502 RNASEH2AO75792 299 aaKnown RBP4.35□□□□□ -1.71
MDM2-228ENST00000542502 SEMA4FO95754 770 aa4.35□□□□□ -1.71
MDM2-228ENST00000542502 CD160O95971 181 aa4.35□□□□□ -1.71
MDM2-228ENST00000542502 PDGFBP01127 241 aaPredicted RBP4.35□□□□□ -1.71
MDM2-228ENST00000542502 FGF1P05230 155 aa4.35□□□□□ -1.71
MDM2-228ENST00000542502 NPPBP16860 134 aa4.35□□□□□ -1.71
MDM2-228ENST00000542502 ZNF30P17039 623 aa4.35□□□□□ -1.71
MDM2-228ENST00000542502 GABRG2P18507 467 aa4.35□□□□□ -1.71
MDM2-228ENST00000542502 HLA-DPA1P20036 260 aa4.35□□□□□ -1.71
MDM2-228ENST00000542502 TNFRSF1BP20333 461 aa4.35□□□□□ -1.71
MDM2-228ENST00000542502 TACR3P29371 465 aa4.35□□□□□ -1.71
MDM2-228ENST00000542502 CPA2P48052 419 aa4.35□□□□□ -1.71
MDM2-228ENST00000542502 MARCKSL1P49006 195 aa4.35□□□□□ -1.71
MDM2-228ENST00000542502 STK19P49842 368 aaPredicted RBP4.35□□□□□ -1.71
MDM2-228ENST00000542502 CDK18Q07002 472 aa4.35□□□□□ -1.71
MDM2-228ENST00000542502 SLC10A7Q0GE19 358 aa4.35□□□□□ -1.71
MDM2-228ENST00000542502 SGCGQ13326 291 aa4.35□□□□□ -1.71
MDM2-228ENST00000542502 SLC14A1Q13336 389 aa4.35□□□□□ -1.71
MDM2-228ENST00000542502 PEX6Q13608 980 aa4.35□□□□□ -1.71
MDM2-228ENST00000542502 MFSD13AQ14CX5 517 aa4.35□□□□□ -1.71
MDM2-228ENST00000542502 CYTH1Q15438 398 aa4.35□□□□□ -1.71
MDM2-228ENST00000542502 UGP2Q16851 508 aa4.35□□□□□ -1.71
MDM2-228ENST00000542502 WHAMMP3Q1A5X7 153 aa4.35□□□□□ -1.71
MDM2-228ENST00000542502 ANKRD20A2Q5SQ80 823 aa4.35□□□□□ -1.71
MDM2-228ENST00000542502 ANKRD20A1Q5TYW2 823 aa4.35□□□□□ -1.71
MDM2-228ENST00000542502 ANKRD20A3Q5VUR7 823 aa4.35□□□□□ -1.71
MDM2-228ENST00000542502 NAPEPLDQ6IQ20 393 aa4.35□□□□□ -1.71
MDM2-228ENST00000542502 JMJD6Q6NYC1 403 aaPredicted RBP4.35□□□□□ -1.71
MDM2-228ENST00000542502 MZT2AQ6P582 158 aa4.35□□□□□ -1.71
MDM2-228ENST00000542502 NCEH1Q6PIU2 408 aa4.35□□□□□ -1.71
MDM2-228ENST00000542502 IL27RAQ6UWB1 636 aa4.35□□□□□ -1.71
MDM2-228ENST00000542502 PPP1R21Q6ZMI0 780 aa4.35□□□□□ -1.71
MDM2-228ENST00000542502 NLRP9Q7RTR0 991 aa4.35□□□□□ -1.71
MDM2-228ENST00000542502 IQCHQ86VS3 1027 aa4.35□□□□□ -1.71
MDM2-228ENST00000542502 TRIM69Q86WT6 500 aa4.35□□□□□ -1.71
MDM2-228ENST00000542502 MMAAQ8IVH4 418 aaKnown RBP4.35□□□□□ -1.71
MDM2-228ENST00000542502 STK40Q8N2I9 435 aa4.35□□□□□ -1.71
MDM2-228ENST00000542502 BBOF1Q8ND07 529 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms