RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 FAM120CQ9NX05 1096 aaKnown RBP5.03□□□□□ -1.6
ATPAF1-212ENST00000542495 GIN1Q9NXP7 522 aa5.03□□□□□ -1.6
ATPAF1-212ENST00000542495 ERVK-18Q9QC07 812 aa5.03□□□□□ -1.6
ATPAF1-212ENST00000542495 WARS2Q9UGM6 360 aaKnown RBP5.03□□□□□ -1.6
ATPAF1-212ENST00000542495 MBD1Q9UIS9 605 aaPredicted RBP5.03□□□□□ -1.6
ATPAF1-212ENST00000542495 RPS6KA6Q9UK32 745 aa5.03□□□□□ -1.6
ATPAF1-212ENST00000542495 CLEC4EQ9ULY5 219 aa5.03□□□□□ -1.6
ATPAF1-212ENST00000542495 ERVK-11Q9UQG0 969 aa5.03□□□□□ -1.6
ATPAF1-212ENST00000542495 TPRKBQ9Y3C4 175 aa5.03□□□□□ -1.6
ATPAF1-212ENST00000542495 DNAH12Q6ZR08 3092 aa5.02□□□□□ -1.61
ATPAF1-212ENST00000542495 PIKFYVEQ9Y2I7 2098 aa5.02□□□□□ -1.61
ATPAF1-212ENST00000542495 EVPLLA8MZ36 301 aa5.02□□□□□ -1.61
ATPAF1-212ENST00000542495 PTGES3LE9PB15 166 aa5.02□□□□□ -1.61
ATPAF1-212ENST00000542495 BOLA2-SMG1P6H3BVE0 249 aa5.02□□□□□ -1.61
ATPAF1-212ENST00000542495 CLIC1O00299 241 aa5.02□□□□□ -1.61
ATPAF1-212ENST00000542495 YY2O15391 372 aa5.02□□□□□ -1.61
ATPAF1-212ENST00000542495 SGTAO43765 313 aa5.02□□□□□ -1.61
ATPAF1-212ENST00000542495 FKBP9O95302 570 aa5.02□□□□□ -1.61
ATPAF1-212ENST00000542495 ZIC2O95409 532 aaPredicted RBP5.02□□□□□ -1.61
ATPAF1-212ENST00000542495 FTH1P02794 183 aa5.02□□□□□ -1.61
ATPAF1-212ENST00000542495 ABCB1P08183 1280 aaPredicted RBP5.02□□□□□ -1.61
ATPAF1-212ENST00000542495 C1SP09871 688 aa5.02□□□□□ -1.61
ATPAF1-212ENST00000542495 OR56A5P0C7T3 313 aa5.02□□□□□ -1.61
ATPAF1-212ENST00000542495 SRCP12931 536 aa5.02□□□□□ -1.61
ATPAF1-212ENST00000542495 ENGP17813 658 aa5.02□□□□□ -1.61
ATPAF1-212ENST00000542495 GRNP28799 593 aaKnown RBP5.02□□□□□ -1.61
ATPAF1-212ENST00000542495 CD70P32970 193 aa5.02□□□□□ -1.61
ATPAF1-212ENST00000542495 GRK3P35626 688 aa5.02□□□□□ -1.61
ATPAF1-212ENST00000542495 PXNP49023 591 aaPredicted RBP5.02□□□□□ -1.61
ATPAF1-212ENST00000542495 ALDH7A1P49419 539 aaKnown RBP5.02□□□□□ -1.61
ATPAF1-212ENST00000542495 PSMD7P51665 324 aa5.02□□□□□ -1.61
ATPAF1-212ENST00000542495 ITGA1P56199 1179 aa5.02□□□□□ -1.61
ATPAF1-212ENST00000542495 AP1S2P56377 157 aa5.02□□□□□ -1.61
ATPAF1-212ENST00000542495 PFN3P60673 137 aa5.02□□□□□ -1.61
ATPAF1-212ENST00000542495 VLDLRP98155 873 aa5.02□□□□□ -1.61
ATPAF1-212ENST00000542495 IL5RAQ01344 420 aa5.02□□□□□ -1.61
ATPAF1-212ENST00000542495 SFSWAPQ12872 951 aaKnown RBP5.02□□□□□ -1.61
ATPAF1-212ENST00000542495 FADDQ13158 208 aa5.02□□□□□ -1.61
ATPAF1-212ENST00000542495 KCNC3Q14003 757 aa5.02□□□□□ -1.61
ATPAF1-212ENST00000542495 MAD2L1BPQ15013 274 aaPredicted RBP5.02□□□□□ -1.61
ATPAF1-212ENST00000542495 TAF12Q16514 161 aa5.02□□□□□ -1.61
ATPAF1-212ENST00000542495 PGS1Q32NB8 556 aa5.02□□□□□ -1.61
ATPAF1-212ENST00000542495 PLEKHG6Q3KR16 790 aa5.02□□□□□ -1.61
ATPAF1-212ENST00000542495 ADPRMQ3LIE5 342 aa5.02□□□□□ -1.61
ATPAF1-212ENST00000542495 MPPE1Q53F39 396 aa5.02□□□□□ -1.61
ATPAF1-212ENST00000542495 SLC44A4Q53GD3 710 aa5.02□□□□□ -1.61
ATPAF1-212ENST00000542495 LDLRAP1Q5SW96 308 aa5.02□□□□□ -1.61
ATPAF1-212ENST00000542495 MLIPQ5VWP3 458 aa5.02□□□□□ -1.61
ATPAF1-212ENST00000542495 KIAA1614Q5VZ46 1190 aa5.02□□□□□ -1.61
ATPAF1-212ENST00000542495 LIPJQ5W064 366 aa5.02□□□□□ -1.61
ATPAF1-212ENST00000542495 LRRC66Q68CR7 880 aa5.02□□□□□ -1.61
ATPAF1-212ENST00000542495 ZCCHC8Q6NZY4 707 aaKnown RBP5.02□□□□□ -1.61
ATPAF1-212ENST00000542495 RFLNAQ6ZTI6 216 aa5.02□□□□□ -1.61
ATPAF1-212ENST00000542495 CAMKMTQ7Z624 323 aa5.02□□□□□ -1.61
ATPAF1-212ENST00000542495 CCDC71Q8IV32 467 aaPredicted RBP5.02□□□□□ -1.61
ATPAF1-212ENST00000542495 VRK3Q8IV63 474 aa5.02□□□□□ -1.61
ATPAF1-212ENST00000542495 SYNPOQ8N3V7 929 aa5.02□□□□□ -1.61
ATPAF1-212ENST00000542495 ARL14EPQ8N8R7 260 aaPredicted RBP5.02□□□□□ -1.61
ATPAF1-212ENST00000542495 KLHL23Q8NBE8 558 aa5.02□□□□□ -1.61
ATPAF1-212ENST00000542495 TET1Q8NFU7 2136 aa5.02□□□□□ -1.61
ATPAF1-212ENST00000542495 OR10Q1Q8NGQ4 319 aa5.02□□□□□ -1.61
ATPAF1-212ENST00000542495 WDR20Q8TBZ3 569 aa5.02□□□□□ -1.61
ATPAF1-212ENST00000542495 DYNC2LI1Q8TCX1 351 aa5.02□□□□□ -1.61
ATPAF1-212ENST00000542495 PHF10Q8WUB8 498 aaKnown RBP5.02□□□□□ -1.61
ATPAF1-212ENST00000542495 S100ZQ8WXG8 99 aa5.02□□□□□ -1.61
ATPAF1-212ENST00000542495 RORBQ92753 470 aa5.02□□□□□ -1.61
ATPAF1-212ENST00000542495 C7orf34Q96L11 122 aa5.02□□□□□ -1.61
ATPAF1-212ENST00000542495 APOLD1Q96LR9 279 aa5.02□□□□□ -1.61
ATPAF1-212ENST00000542495 DACH2Q96NX9 599 aa5.02□□□□□ -1.61
ATPAF1-212ENST00000542495 ALPK1Q96QP1 1244 aa5.02□□□□□ -1.61
ATPAF1-212ENST00000542495 EPYCQ99645 322 aa5.02□□□□□ -1.61
ATPAF1-212ENST00000542495 P2RY13Q9BPV8 354 aa5.02□□□□□ -1.61
ATPAF1-212ENST00000542495 APOL4Q9BPW4 351 aa5.02□□□□□ -1.61
ATPAF1-212ENST00000542495 HERC2P3Q9BVR0 1158 aa5.02□□□□□ -1.61
ATPAF1-212ENST00000542495 GABARAPL3Q9BY60 117 aa5.02□□□□□ -1.61
ATPAF1-212ENST00000542495 CPEB1Q9BZB8 566 aaKnown RBP5.02□□□□□ -1.61
ATPAF1-212ENST00000542495 WDR12Q9GZL7 423 aaKnown RBP5.02□□□□□ -1.61
ATPAF1-212ENST00000542495 REXO4Q9GZR2 422 aaKnown RBP5.02□□□□□ -1.61
ATPAF1-212ENST00000542495 SUV39H2Q9H5I1 410 aa5.02□□□□□ -1.61
ATPAF1-212ENST00000542495 HMG20AQ9NP66 347 aa5.02□□□□□ -1.61
ATPAF1-212ENST00000542495 CCNB1IP1Q9NPC3 277 aa5.02□□□□□ -1.61
ATPAF1-212ENST00000542495 MAFFQ9ULX9 164 aa5.02□□□□□ -1.61
ATPAF1-212ENST00000542495 HS3ST2Q9Y278 367 aa5.02□□□□□ -1.61
ATPAF1-212ENST00000542495 GPC6Q9Y625 555 aaPredicted RBP5.02□□□□□ -1.61
ATPAF1-212ENST00000542495 CPQQ9Y646 472 aa5.02□□□□□ -1.61
ATPAF1-212ENST00000542495 PMF1-BGLAPU3KQ54 211 aa5.02□□□□□ -1.61
ATPAF1-212ENST00000542495 U3KQV3 271 aa5.02□□□□□ -1.61
ATPAF1-212ENST00000542495 A0A1W2PQ67 120 aa5.01□□□□□ -1.61
ATPAF1-212ENST00000542495 C1orf226A1L170 272 aa5.01□□□□□ -1.61
ATPAF1-212ENST00000542495 OR2A25A4D2G3 310 aa5.01□□□□□ -1.61
ATPAF1-212ENST00000542495 CLDN24A6NM45 220 aa5.01□□□□□ -1.61
ATPAF1-212ENST00000542495 A8MX80 341 aa5.01□□□□□ -1.61
ATPAF1-212ENST00000542495 H0YIV9 168 aa5.01□□□□□ -1.61
ATPAF1-212ENST00000542495 KPNA4O00629 521 aaPredicted RBP5.01□□□□□ -1.61
ATPAF1-212ENST00000542495 FPGTO14772 594 aa5.01□□□□□ -1.61
ATPAF1-212ENST00000542495 KPNA5O15131 536 aa5.01□□□□□ -1.61
ATPAF1-212ENST00000542495 RGS10O43665 173 aa5.01□□□□□ -1.61
ATPAF1-212ENST00000542495 WBP4O75554 376 aaKnown RBP5.01□□□□□ -1.61
ATPAF1-212ENST00000542495 SLCO2B1O94956 709 aa5.01□□□□□ -1.61
ATPAF1-212ENST00000542495 EPN2O95208 641 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms