RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 SDC3O75056 442 aa5.29□□□□□ -1.56
CPSF7-220ENST00000541963 RECQL5O94762 991 aaPredicted RBP5.29□□□□□ -1.56
CPSF7-220ENST00000541963 HEXIM1O94992 359 aaKnown RBP5.29□□□□□ -1.56
CPSF7-220ENST00000541963 TJP3O95049 919 aa5.29□□□□□ -1.56
CPSF7-220ENST00000541963 PRKCGP05129 697 aa5.29□□□□□ -1.56
CPSF7-220ENST00000541963 PCCBP05166 539 aa5.29□□□□□ -1.56
CPSF7-220ENST00000541963 TMIGD3P0DMS9 266 aaPredicted RBP5.29□□□□□ -1.56
CPSF7-220ENST00000541963 JUPP14923 745 aa5.29□□□□□ -1.56
CPSF7-220ENST00000541963 ACP1P24666 158 aa5.29□□□□□ -1.56
CPSF7-220ENST00000541963 THBS4P35443 961 aa5.29□□□□□ -1.56
CPSF7-220ENST00000541963 HNF1BP35680 557 aa5.29□□□□□ -1.56
CPSF7-220ENST00000541963 CDKN2BP42772 138 aa5.29□□□□□ -1.56
CPSF7-220ENST00000541963 SEC24CP53992 1094 aa5.29□□□□□ -1.56
CPSF7-220ENST00000541963 SRP54P61011 504 aaKnown RBP5.29□□□□□ -1.56
CPSF7-220ENST00000541963 DYNLT1P63172 113 aa5.29□□□□□ -1.56
CPSF7-220ENST00000541963 IFI35P80217 286 aaPredicted RBP5.29□□□□□ -1.56
CPSF7-220ENST00000541963 SLC10A2Q12908 348 aaPredicted RBP5.29□□□□□ -1.56
CPSF7-220ENST00000541963 TRAF2Q12933 501 aa5.29□□□□□ -1.56
CPSF7-220ENST00000541963 XRCC4Q13426 336 aa5.29□□□□□ -1.56
CPSF7-220ENST00000541963 EFR3AQ14156 821 aa5.29□□□□□ -1.56
CPSF7-220ENST00000541963 FZD2Q14332 565 aa5.29□□□□□ -1.56
CPSF7-220ENST00000541963 NFATC4Q14934 902 aa5.29□□□□□ -1.56
CPSF7-220ENST00000541963 IRF4Q15306 451 aa5.29□□□□□ -1.56
CPSF7-220ENST00000541963 TAZQ16635 292 aa5.29□□□□□ -1.56
CPSF7-220ENST00000541963 WSCD2Q2TBF2 565 aa5.29□□□□□ -1.56
CPSF7-220ENST00000541963 TEX44Q53QW1 395 aa5.29□□□□□ -1.56
CPSF7-220ENST00000541963 ZNF542PQ5EBM4 170 aa5.29□□□□□ -1.56
CPSF7-220ENST00000541963 AARS2Q5JTZ9 985 aaKnown RBP5.29□□□□□ -1.56
CPSF7-220ENST00000541963 FAM90A2PQ658T7 463 aa5.29□□□□□ -1.56
CPSF7-220ENST00000541963 PNCKQ6P2M8 343 aa5.29□□□□□ -1.56
CPSF7-220ENST00000541963 LVRNQ6Q4G3 990 aa5.29□□□□□ -1.56
CPSF7-220ENST00000541963 MFSD7Q6UXD7 560 aa5.29□□□□□ -1.56
CPSF7-220ENST00000541963 RAD9BQ6WBX8 426 aa5.29□□□□□ -1.56
CPSF7-220ENST00000541963 Q6YL49 198 aa5.29□□□□□ -1.56
CPSF7-220ENST00000541963 PID1Q7Z2X4 250 aa5.29□□□□□ -1.56
CPSF7-220ENST00000541963 RD3Q7Z3Z2 195 aa5.29□□□□□ -1.56
CPSF7-220ENST00000541963 PEX26Q7Z412 305 aa5.29□□□□□ -1.56
CPSF7-220ENST00000541963 TMPRSS12Q86WS5 348 aa5.29□□□□□ -1.56
CPSF7-220ENST00000541963 GKN2Q86XP6 184 aa5.29□□□□□ -1.56
CPSF7-220ENST00000541963 VRK3Q8IV63 474 aa5.29□□□□□ -1.56
CPSF7-220ENST00000541963 SLC22A18ASQ8N1D0 253 aa5.29□□□□□ -1.56
CPSF7-220ENST00000541963 SLC25A45Q8N413 288 aa5.29□□□□□ -1.56
CPSF7-220ENST00000541963 CHCHD4Q8N4Q1 142 aa5.29□□□□□ -1.56
CPSF7-220ENST00000541963 MNS1Q8NEH6 495 aa5.29□□□□□ -1.56
CPSF7-220ENST00000541963 OR4C6Q8NH72 309 aa5.29□□□□□ -1.56
CPSF7-220ENST00000541963 LMX1AQ8TE12 382 aa5.29□□□□□ -1.56
CPSF7-220ENST00000541963 PIH1D2Q8WWB5 315 aa5.29□□□□□ -1.56
CPSF7-220ENST00000541963 VOPP1Q96AW1 172 aa5.29□□□□□ -1.56
CPSF7-220ENST00000541963 NUS1Q96E22 293 aa5.29□□□□□ -1.56
CPSF7-220ENST00000541963 WDYHV1Q96HA8 205 aa5.29□□□□□ -1.56
CPSF7-220ENST00000541963 COG8Q96MW5 612 aa5.29□□□□□ -1.56
CPSF7-220ENST00000541963 AGAP3Q96P47 875 aa5.29□□□□□ -1.56
CPSF7-220ENST00000541963 PPP1R2P1Q96PQ5 205 aa5.29□□□□□ -1.56
CPSF7-220ENST00000541963 LGMNQ99538 433 aa5.29□□□□□ -1.56
CPSF7-220ENST00000541963 MLPHQ9BV36 600 aaPredicted RBP5.29□□□□□ -1.56
CPSF7-220ENST00000541963 ZNF747Q9BV97 191 aa5.29□□□□□ -1.56
CPSF7-220ENST00000541963 ABCG4Q9H172 646 aa5.29□□□□□ -1.56
CPSF7-220ENST00000541963 SLC25A51Q9H1U9 297 aa5.29□□□□□ -1.56
CPSF7-220ENST00000541963 CHODLQ9H9P2 273 aa5.29□□□□□ -1.56
CPSF7-220ENST00000541963 PCDH9Q9HC56 1237 aa5.29□□□□□ -1.56
CPSF7-220ENST00000541963 MBNL1Q9NR56 388 aaKnown RBP5.29□□□□□ -1.56
CPSF7-220ENST00000541963 PHPT1Q9NRX4 125 aaPredicted RBP5.29□□□□□ -1.56
CPSF7-220ENST00000541963 SEPT10Q9P0V9 454 aa5.29□□□□□ -1.56
CPSF7-220ENST00000541963 KLQ9UEF7 1012 aa5.29□□□□□ -1.56
CPSF7-220ENST00000541963 APOBEC3BQ9UH17 382 aaKnown RBP5.29□□□□□ -1.56
CPSF7-220ENST00000541963 CHKBQ9Y259 395 aa5.29□□□□□ -1.56
CPSF7-220ENST00000541963 MYRFQ9Y2G1 1151 aa5.29□□□□□ -1.56
CPSF7-220ENST00000541963 HYOU1Q9Y4L1 999 aa5.29□□□□□ -1.56
CPSF7-220ENST00000541963 ASCC3Q8N3C0 2202 aaKnown RBP5.29□□□□□ -1.56
CPSF7-220ENST00000541963 SHROOM3Q8TF72 1996 aa5.29□□□□□ -1.56
CPSF7-220ENST00000541963 ANKRD36A6QL64 1941 aa5.29□□□□□ -1.56
CPSF7-220ENST00000541963 DOCK9Q9BZ29 2069 aa5.28□□□□□ -1.56
CPSF7-220ENST00000541963 CACNA1EQ15878 2313 aa5.28□□□□□ -1.56
CPSF7-220ENST00000541963 hCG_1818297A0A087WSY0 165 aa5.28□□□□□ -1.56
CPSF7-220ENST00000541963 A0A0J9YYE9 177 aa5.28□□□□□ -1.56
CPSF7-220ENST00000541963 FAM90A18PA6NE21 464 aa5.28□□□□□ -1.56
CPSF7-220ENST00000541963 FAM90A16PA6NEW6 464 aa5.28□□□□□ -1.56
CPSF7-220ENST00000541963 FAM90A9PA6NNJ1 464 aa5.28□□□□□ -1.56
CPSF7-220ENST00000541963 LINC00473A8K010 186 aa5.28□□□□□ -1.56
CPSF7-220ENST00000541963 FAM90A5PA8MXJ8 464 aa5.28□□□□□ -1.56
CPSF7-220ENST00000541963 HMGB1P1B2RPK0 211 aaPredicted RBP5.28□□□□□ -1.56
CPSF7-220ENST00000541963 ANKRD66B4E2M5 251 aa5.28□□□□□ -1.56
CPSF7-220ENST00000541963 B8ZZF3 427 aa5.28□□□□□ -1.56
CPSF7-220ENST00000541963 H7C0C1 242 aa5.28□□□□□ -1.56
CPSF7-220ENST00000541963 APOC4-APOC2K7ER74 178 aa5.28□□□□□ -1.56
CPSF7-220ENST00000541963 KCNK1O00180 336 aa5.28□□□□□ -1.56
CPSF7-220ENST00000541963 ZW10O43264 779 aa5.28□□□□□ -1.56
CPSF7-220ENST00000541963 DHHO43323 396 aa5.28□□□□□ -1.56
CPSF7-220ENST00000541963 KIF1CO43896 1103 aaKnown RBP5.28□□□□□ -1.56
CPSF7-220ENST00000541963 TRBC1P01850 177 aa5.28□□□□□ -1.56
CPSF7-220ENST00000541963 APOC2P02655 101 aa5.28□□□□□ -1.56
CPSF7-220ENST00000541963 TK1P04183 234 aa5.28□□□□□ -1.56
CPSF7-220ENST00000541963 HLA-DQB2P05538 268 aa5.28□□□□□ -1.56
CPSF7-220ENST00000541963 GP1BAP07359 652 aa5.28□□□□□ -1.56
CPSF7-220ENST00000541963 IVLP07476 585 aa5.28□□□□□ -1.56
CPSF7-220ENST00000541963 FAM90A15PP0C7V4 464 aa5.28□□□□□ -1.56
CPSF7-220ENST00000541963 FAM90A14PP0C7W9 464 aa5.28□□□□□ -1.56
CPSF7-220ENST00000541963 CKMT1AP12532 417 aa5.28□□□□□ -1.56
CPSF7-220ENST00000541963 CTPS1P17812 591 aa5.28□□□□□ -1.56
CPSF7-220ENST00000541963 CD53P19397 219 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms