RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 RIBC1Q8N443 379 aaPredicted RBP9.24□□□□□ -0.93
CHFR-220ENST00000541817 NIPA2Q8N8Q9 360 aa9.24□□□□□ -0.93
CHFR-220ENST00000541817 ANKS4BQ8N8V4 417 aa9.24□□□□□ -0.93
CHFR-220ENST00000541817 DYDC1Q8WWB3 177 aa9.24□□□□□ -0.93
CHFR-220ENST00000541817 P3H4Q92791 437 aa9.24□□□□□ -0.93
CHFR-220ENST00000541817 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.24□□□□□ -0.934e-6■■■■■ 45.1
CHFR-220ENST00000541817 SCMH1Q96GD3 660 aa9.24□□□□□ -0.93
CHFR-220ENST00000541817 YIPF2Q9BWQ6 316 aa9.24□□□□□ -0.93
CHFR-220ENST00000541817 ADGRE3Q9BY15 652 aa9.24□□□□□ -0.93
CHFR-220ENST00000541817 CEP41Q9BYV8 373 aa9.24□□□□□ -0.93
CHFR-220ENST00000541817 TFB2MQ9H5Q4 396 aaKnown RBP9.24□□□□□ -0.93
CHFR-220ENST00000541817 SLC24A3Q9HC58 644 aa9.24□□□□□ -0.93
CHFR-220ENST00000541817 IL26Q9NPH9 171 aa9.24□□□□□ -0.93
CHFR-220ENST00000541817 PLAGL1Q9UM63 463 aa9.24□□□□□ -0.93
CHFR-220ENST00000541817 DNMT3AQ9Y6K1 912 aaPredicted RBP9.24□□□□□ -0.93
CHFR-220ENST00000541817 LRRD1A4D1F6 860 aa9.23□□□□□ -0.93
CHFR-220ENST00000541817 ISM1B1AKI9 464 aa9.23□□□□□ -0.93
CHFR-220ENST00000541817 H0YHG0 523 aa9.23□□□□□ -0.93
CHFR-220ENST00000541817 DNALI1O14645 258 aaPredicted RBP9.23□□□□□ -0.93
CHFR-220ENST00000541817 MATN3O15232 486 aa9.23□□□□□ -0.93
CHFR-220ENST00000541817 LIASO43766 372 aa9.23□□□□□ -0.93
CHFR-220ENST00000541817 F12P00748 615 aaPredicted RBP9.23□□□□□ -0.93
CHFR-220ENST00000541817 CHRM5P08912 532 aaPredicted RBP9.23□□□□□ -0.93
CHFR-220ENST00000541817 NID1P14543 1247 aa9.23□□□□□ -0.93
CHFR-220ENST00000541817 ZNF24P17028 368 aa9.23□□□□□ -0.93
CHFR-220ENST00000541817 DRD4P21917 467 aa9.23□□□□□ -0.93
CHFR-220ENST00000541817 CXCR2P25025 360 aa9.23□□□□□ -0.93
CHFR-220ENST00000541817 IL1R2P27930 398 aa9.23□□□□□ -0.93
CHFR-220ENST00000541817 PDHA2P29803 388 aa9.23□□□□□ -0.93
CHFR-220ENST00000541817 SLCO1A2P46721 670 aa9.23□□□□□ -0.93
CHFR-220ENST00000541817 IFI35P80217 286 aaPredicted RBP9.23□□□□□ -0.93
CHFR-220ENST00000541817 OCA2Q04671 838 aa9.23□□□□□ -0.93
CHFR-220ENST00000541817 IFT88Q13099 833 aa9.23□□□□□ -0.93
CHFR-220ENST00000541817 MAPKAPK3Q16644 382 aa9.23□□□□□ -0.93
CHFR-220ENST00000541817 P3H1Q32P28 736 aa9.23□□□□□ -0.93
CHFR-220ENST00000541817 EMC4Q5J8M3 183 aa9.23□□□□□ -0.93
CHFR-220ENST00000541817 LDLRAP1Q5SW96 308 aa9.23□□□□□ -0.93
CHFR-220ENST00000541817 MFSD7Q6UXD7 560 aa9.23□□□□□ -0.93
CHFR-220ENST00000541817 RELL1Q8IUW5 271 aa9.23□□□□□ -0.93
CHFR-220ENST00000541817 P3H2Q8IVL5 708 aa9.23□□□□□ -0.93
CHFR-220ENST00000541817 C2orf73Q8N5S3 287 aaPredicted RBP9.23□□□□□ -0.93
CHFR-220ENST00000541817 CCDC197Q8NCU1 140 aa9.23□□□□□ -0.93
CHFR-220ENST00000541817 MAML1Q92585 1016 aa9.23□□□□□ -0.93
CHFR-220ENST00000541817 TRIB3Q96RU7 358 aa9.23□□□□□ -0.93
CHFR-220ENST00000541817 ZCCHC2Q9C0B9 1178 aaKnown RBP9.23□□□□□ -0.93
CHFR-220ENST00000541817 MAGEE1Q9HCI5 957 aa9.23□□□□□ -0.93
CHFR-220ENST00000541817 NINJ2Q9NZG7 142 aa9.23□□□□□ -0.93
CHFR-220ENST00000541817 SAMD15Q9P1V8 674 aa9.23□□□□□ -0.93
CHFR-220ENST00000541817 EFR3BQ9Y2G0 817 aa9.23□□□□□ -0.93
CHFR-220ENST00000541817 HEBP2Q9Y5Z4 205 aa9.23□□□□□ -0.93
CHFR-220ENST00000541817 TLN2Q9Y4G6 2542 aa9.23□□□□□ -0.93
CHFR-220ENST00000541817 SCN2AQ99250 2005 aa9.22□□□□□ -0.93
CHFR-220ENST00000541817 MPDZO75970 2070 aa9.22□□□□□ -0.93
CHFR-220ENST00000541817 hCG_1818297A0A087WSY0 165 aa9.22□□□□□ -0.93
CHFR-220ENST00000541817 IDSB3KWA1 339 aa9.22□□□□□ -0.93
CHFR-220ENST00000541817 ANKRD65E5RJM6 399 aa9.22□□□□□ -0.93
CHFR-220ENST00000541817 SGTAO43765 313 aa9.22□□□□□ -0.93
CHFR-220ENST00000541817 RNF8O76064 485 aa9.22□□□□□ -0.93
CHFR-220ENST00000541817 SP1P08047 785 aa9.22□□□□□ -0.93
CHFR-220ENST00000541817 VIMP08670 466 aaKnown RBP9.22□□□□□ -0.93
CHFR-220ENST00000541817 ABHD2P08910 425 aa9.22□□□□□ -0.93
CHFR-220ENST00000541817 TPBGLP0DKB5 382 aa9.22□□□□□ -0.93
CHFR-220ENST00000541817 CD46P15529 392 aa9.22□□□□□ -0.93
CHFR-220ENST00000541817 DESP17661 470 aa9.22□□□□□ -0.93
CHFR-220ENST00000541817 MSH3P20585 1137 aa9.22□□□□□ -0.93
CHFR-220ENST00000541817 MAGP20916 626 aa9.22□□□□□ -0.93
CHFR-220ENST00000541817 CES1P23141 567 aa9.22□□□□□ -0.93
CHFR-220ENST00000541817 PEBP1P30086 187 aaKnown RBP9.22□□□□□ -0.93
CHFR-220ENST00000541817 UQCRC1P31930 480 aa9.22□□□□□ -0.93
CHFR-220ENST00000541817 MAGEA4P43358 317 aa9.22□□□□□ -0.93
CHFR-220ENST00000541817 EFNA3P52797 238 aa9.22□□□□□ -0.93
CHFR-220ENST00000541817 OC90Q02509 493 aaPredicted RBP9.22□□□□□ -0.93
CHFR-220ENST00000541817 PTPRCAPQ14761 206 aa9.22□□□□□ -0.93
CHFR-220ENST00000541817 MORF4L2Q15014 288 aa9.22□□□□□ -0.93
CHFR-220ENST00000541817 POU4F3Q15319 338 aa9.22□□□□□ -0.93
CHFR-220ENST00000541817 TNFAIP8L3Q5GJ75 292 aa9.22□□□□□ -0.93
CHFR-220ENST00000541817 ACER2Q5QJU3 275 aa9.22□□□□□ -0.93
CHFR-220ENST00000541817 C6orf89Q6UWU4 347 aa9.22□□□□□ -0.93
CHFR-220ENST00000541817 RIPOR1Q6ZS17 1223 aa9.22□□□□□ -0.93
CHFR-220ENST00000541817 CXorf67Q86X51 503 aaPredicted RBP9.22□□□□□ -0.93
CHFR-220ENST00000541817 CRLF3Q8IUI8 442 aa9.22□□□□□ -0.93
CHFR-220ENST00000541817 DDHD1Q8NEL9 900 aa9.22□□□□□ -0.93
CHFR-220ENST00000541817 OR5M3Q8NGP4 307 aa9.22□□□□□ -0.93
CHFR-220ENST00000541817 OR5AR1Q8NGP9 310 aa9.22□□□□□ -0.93
CHFR-220ENST00000541817 NPAS2Q99743 824 aa9.22□□□□□ -0.93
CHFR-220ENST00000541817 UTP23Q9BRU9 249 aaKnown RBP9.22□□□□□ -0.93
CHFR-220ENST00000541817 CCDC134Q9H6E4 229 aa9.22□□□□□ -0.93
CHFR-220ENST00000541817 PLEKHF2Q9H8W4 249 aa9.22□□□□□ -0.93
CHFR-220ENST00000541817 PPCSQ9HAB8 311 aa9.22□□□□□ -0.93
CHFR-220ENST00000541817 ZNF304Q9HCX3 659 aa9.22□□□□□ -0.93
CHFR-220ENST00000541817 SAYSD1Q9NPB0 183 aa9.22□□□□□ -0.93
CHFR-220ENST00000541817 KCNK9Q9NPC2 374 aa9.22□□□□□ -0.93
CHFR-220ENST00000541817 RIC8BQ9NVN3 520 aa9.22□□□□□ -0.93
CHFR-220ENST00000541817 NKIRAS1Q9NYS0 192 aa9.22□□□□□ -0.93
CHFR-220ENST00000541817 ZNF282Q9UDV7 671 aaPredicted RBP9.22□□□□□ -0.93
CHFR-220ENST00000541817 CAPN7Q9Y6W3 813 aa9.22□□□□□ -0.93
CHFR-220ENST00000541817 SMAPO00193 183 aa9.21□□□□□ -0.94
CHFR-220ENST00000541817 GAPDHSO14556 408 aaPredicted RBP9.21□□□□□ -0.94
CHFR-220ENST00000541817 PHF1O43189 567 aaPredicted RBP9.21□□□□□ -0.94
CHFR-220ENST00000541817 ARHGEF9O43307 516 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms