RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 IL12RB1P42701 662 aa16.59■□□□□ 0.25
SPIDR-227ENST00000541342 ELAVL3Q14576 367 aaKnown RBP16.59■□□□□ 0.25
SPIDR-227ENST00000541342 NCCRP1Q6ZVX7 275 aaPredicted RBP16.59■□□□□ 0.25
SPIDR-227ENST00000541342 TRIM46Q7Z4K8 759 aa16.59■□□□□ 0.25
SPIDR-227ENST00000541342 ADHFE1Q8IWW8 467 aa16.59■□□□□ 0.25
SPIDR-227ENST00000541342 RGL4Q8IZJ4 473 aa16.59■□□□□ 0.25
SPIDR-227ENST00000541342 VMP1Q96GC9 406 aa16.59■□□□□ 0.25
SPIDR-227ENST00000541342 COQ10AQ96MF6 247 aa16.59■□□□□ 0.25
SPIDR-227ENST00000541342 CD244Q9BZW8 370 aa16.59■□□□□ 0.25
SPIDR-227ENST00000541342 DPY30Q9C005 99 aa16.59■□□□□ 0.25
SPIDR-227ENST00000541342 ERVK-18Q9QC07 812 aa16.59■□□□□ 0.25
SPIDR-227ENST00000541342 TMEM202A6NGA9 273 aa16.59■□□□□ 0.25
SPIDR-227ENST00000541342 M0QX08 132 aa16.59■□□□□ 0.25
SPIDR-227ENST00000541342 BCKDKO14874 412 aa16.59■□□□□ 0.25
SPIDR-227ENST00000541342 IL6P05231 212 aa16.59■□□□□ 0.25
SPIDR-227ENST00000541342 ALDH4A1P30038 563 aa16.59■□□□□ 0.25
SPIDR-227ENST00000541342 HALP42357 657 aa16.59■□□□□ 0.25
SPIDR-227ENST00000541342 MAP2K4P45985 399 aa16.59■□□□□ 0.25
SPIDR-227ENST00000541342 ZNF846Q147U1 533 aa16.59■□□□□ 0.25
SPIDR-227ENST00000541342 ZXDCQ2QGD7 858 aaPredicted RBP16.59■□□□□ 0.25
SPIDR-227ENST00000541342 TRIM16LQ309B1 348 aa16.59■□□□□ 0.25
SPIDR-227ENST00000541342 GALNT5Q7Z7M9 940 aa16.59■□□□□ 0.25
SPIDR-227ENST00000541342 SLCO6A1Q86UG4 719 aa16.59■□□□□ 0.25
SPIDR-227ENST00000541342 CPA6Q8N4T0 437 aa16.59■□□□□ 0.25
SPIDR-227ENST00000541342 ARL10Q8N8L6 244 aa16.59■□□□□ 0.25
SPIDR-227ENST00000541342 FGF14Q92915 247 aa16.59■□□□□ 0.25
SPIDR-227ENST00000541342 NCLNQ969V3 563 aa16.59■□□□□ 0.25
SPIDR-227ENST00000541342 AP2M1Q96CW1 435 aa16.59■□□□□ 0.25
SPIDR-227ENST00000541342 CPPED1Q9BRF8 314 aaPredicted RBP16.59■□□□□ 0.25
SPIDR-227ENST00000541342 CCDC90BQ9GZT6 254 aa16.59■□□□□ 0.25
SPIDR-227ENST00000541342 MAGIXQ9H6Y5 334 aa16.59■□□□□ 0.25
SPIDR-227ENST00000541342 WWOXQ9NZC7 414 aa16.59■□□□□ 0.25
SPIDR-227ENST00000541342 DAPK2Q9UIK4 370 aa16.59■□□□□ 0.25
SPIDR-227ENST00000541342 EIF3LQ9Y262 564 aaKnown RBP16.59■□□□□ 0.25
SPIDR-227ENST00000541342 NUAK1O60285 661 aa16.58■□□□□ 0.25
SPIDR-227ENST00000541342 SLC14A1Q13336 389 aa16.58■□□□□ 0.25
SPIDR-227ENST00000541342 TOP3AQ13472 1001 aaPredicted RBP16.58■□□□□ 0.25
SPIDR-227ENST00000541342 ZNF284Q2VY69 593 aa16.58■□□□□ 0.25
SPIDR-227ENST00000541342 USP39Q53GS9 565 aaKnown RBP16.58■□□□□ 0.25
SPIDR-227ENST00000541342 PERM1Q5SV97 790 aa16.58■□□□□ 0.25
SPIDR-227ENST00000541342 PARM1Q6UWI2 310 aa16.58■□□□□ 0.25
SPIDR-227ENST00000541342 CEP68Q76N32 757 aa16.58■□□□□ 0.25
SPIDR-227ENST00000541342 UBTD2Q8WUN7 234 aa16.58■□□□□ 0.25
SPIDR-227ENST00000541342 VPS35Q96QK1 796 aa16.58■□□□□ 0.25
SPIDR-227ENST00000541342 OR52E6Q96RD3 313 aa16.58■□□□□ 0.25
SPIDR-227ENST00000541342 ZBTB18Q99592 522 aa16.58■□□□□ 0.25
SPIDR-227ENST00000541342 RPP25Q9BUL9 199 aaKnown RBP16.58■□□□□ 0.25
SPIDR-227ENST00000541342 RAD18Q9NS91 495 aa16.58■□□□□ 0.25
SPIDR-227ENST00000541342 KLQ9UEF7 1012 aa16.58■□□□□ 0.25
SPIDR-227ENST00000541342 PCDHGA10Q9Y5H3 936 aa16.58■□□□□ 0.25
SPIDR-227ENST00000541342 SNX5Q9Y5X3 404 aa16.58■□□□□ 0.25
SPIDR-227ENST00000541342 KRT87PA6NCN2 255 aa16.58■□□□□ 0.24
SPIDR-227ENST00000541342 TMEM247A6NEH6 219 aa16.58■□□□□ 0.24
SPIDR-227ENST00000541342 WNT9AO14904 365 aa16.58■□□□□ 0.24
SPIDR-227ENST00000541342 RGS14O43566 566 aa16.58■□□□□ 0.24
SPIDR-227ENST00000541342 E2F6O75461 281 aa16.58■□□□□ 0.24
SPIDR-227ENST00000541342 DNAJB5O75953 348 aa16.58■□□□□ 0.24
SPIDR-227ENST00000541342 SOD1P00441 154 aa16.58■□□□□ 0.24
SPIDR-227ENST00000541342 FTH1P02794 183 aa16.58■□□□□ 0.24
SPIDR-227ENST00000541342 ITGAMP11215 1152 aa16.58■□□□□ 0.24
SPIDR-227ENST00000541342 FMO3P31513 532 aa16.58■□□□□ 0.24
SPIDR-227ENST00000541342 MASP1P48740 699 aa16.58■□□□□ 0.24
SPIDR-227ENST00000541342 CTSCP53634 463 aa16.58■□□□□ 0.24
SPIDR-227ENST00000541342 SGO1Q5FBB7 561 aa16.58■□□□□ 0.24
SPIDR-227ENST00000541342 ZC3H12BQ5HYM0 836 aaKnown RBP16.58■□□□□ 0.24
SPIDR-227ENST00000541342 CPZQ66K79 652 aa16.58■□□□□ 0.24
SPIDR-227ENST00000541342 CES5AQ6NT32 575 aa16.58■□□□□ 0.24
SPIDR-227ENST00000541342 FKBP9P1Q75LS8 142 aa16.58■□□□□ 0.24
SPIDR-227ENST00000541342 RASGEF1AQ8N9B8 481 aa16.58■□□□□ 0.24
SPIDR-227ENST00000541342 MCOLN3Q8TDD5 553 aa16.58■□□□□ 0.24
SPIDR-227ENST00000541342 GLYATL1Q969I3 302 aa16.58■□□□□ 0.24
SPIDR-227ENST00000541342 DTD2Q96FN9 168 aa16.58■□□□□ 0.24
SPIDR-227ENST00000541342 INPP5KQ9BT40 448 aa16.58■□□□□ 0.24
SPIDR-227ENST00000541342 FAM220BPB1ANY3 271 aa16.58■□□□□ 0.24
SPIDR-227ENST00000541342 EIF3FO00303 357 aaPredicted RBP16.58■□□□□ 0.24
SPIDR-227ENST00000541342 MAGEA2P43356 314 aa16.58■□□□□ 0.24
SPIDR-227ENST00000541342 RPIAP49247 311 aa16.58■□□□□ 0.24
SPIDR-227ENST00000541342 UBE2R2Q712K3 238 aaPredicted RBP16.58■□□□□ 0.24
SPIDR-227ENST00000541342 GLB1L3Q8NCI6 653 aaPredicted RBP16.58■□□□□ 0.24
SPIDR-227ENST00000541342 PIK3C3Q8NEB9 887 aa16.58■□□□□ 0.24
SPIDR-227ENST00000541342 ASB11Q8WXH4 323 aa16.58■□□□□ 0.24
SPIDR-227ENST00000541342 YIPF6Q96EC8 236 aa16.58■□□□□ 0.24
SPIDR-227ENST00000541342 ZNF490Q9ULM2 529 aaPredicted RBP16.58■□□□□ 0.24
SPIDR-227ENST00000541342 DLGAP4Q9Y2H0 992 aa16.58■□□□□ 0.24
SPIDR-227ENST00000541342 K7ESM1 405 aa16.57■□□□□ 0.24
SPIDR-227ENST00000541342 BCKDHAP12694 445 aa16.57■□□□□ 0.24
SPIDR-227ENST00000541342 ADRB3P13945 408 aa16.57■□□□□ 0.24
SPIDR-227ENST00000541342 CDKN2CP42773 168 aa16.57■□□□□ 0.24
SPIDR-227ENST00000541342 GNPDA1P46926 289 aa16.57■□□□□ 0.24
SPIDR-227ENST00000541342 SLC35A2P78381 396 aa16.57■□□□□ 0.24
SPIDR-227ENST00000541342 VAC14Q08AM6 782 aa16.57■□□□□ 0.24
SPIDR-227ENST00000541342 PLEKHS1Q5SXH7 462 aa16.57■□□□□ 0.24
SPIDR-227ENST00000541342 MMAAQ8IVH4 418 aaKnown RBP16.57■□□□□ 0.24
SPIDR-227ENST00000541342 GDF15Q99988 308 aa16.57■□□□□ 0.24
SPIDR-227ENST00000541342 CLEC1BQ9P126 229 aa16.57■□□□□ 0.24
SPIDR-227ENST00000541342 ABCG2Q9UNQ0 655 aa16.57■□□□□ 0.24
SPIDR-227ENST00000541342 PSMD11O00231 422 aa16.57■□□□□ 0.24
SPIDR-227ENST00000541342 SEC22BO75396 215 aa16.57■□□□□ 0.24
SPIDR-227ENST00000541342 AP2A2O94973 939 aa16.57■□□□□ 0.24
SPIDR-227ENST00000541342 ANGPTL1O95841 491 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms