RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	CLHC1	Q8NHS4	586 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	RHOXF1	Q8NHV9	184 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	EFHD2	Q96C19	240 aa	Predicted RBP	5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	FAM122A	Q96E09	287 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	ZHX1-C8orf76	Q96EF9	292 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	DHRS1	Q96LJ7	313 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	ATOH8	Q96SQ7	321 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	BTBD2	Q9BX70	525 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	CHRD	Q9H2X0	955 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	SARS2	Q9NP81	518 aa	Known RBP	5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	EIF2B4	Q9UI10	523 aa	Known RBP	5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	MAGEL2	Q9UJ55	1249 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	CCL26	Q9Y258	94 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783		A0A0U1RQS6	177 aa		5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	LOC100506127	A0A0U1RQW1	187 aa		5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	KPNA5	O15131	536 aa		5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	SLC22A1	O15245	554 aa		5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	NUAK1	O60285	661 aa		5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	RPP40	O75818	363 aa	Known RBP	5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	CCNK	O75909	580 aa		5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	PAPSS2	O95340	614 aa	Predicted RBP	5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	SEMA4F	O95754	770 aa		5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	EFEMP2	O95967	443 aa		5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	LPO	P22079	712 aa	Predicted RBP	5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	HOXD9	P28356	352 aa	Predicted RBP	5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	DCT	P40126	519 aa		5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	HNRNPF	P52597	415 aa	Known RBP	5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	PPP2R2B	Q00005	443 aa		5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	PRKG2	Q13237	762 aa		5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	GALNT3	Q14435	633 aa		5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	SGO1	Q5FBB7	561 aa		5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	RAET1G	Q6H3X3	334 aa		5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783		Q6ZNB5	142 aa		5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	SYT13	Q7L8C5	426 aa		5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	PLPP6	Q8IY26	295 aa		5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	TMIE	Q8NEW7	156 aa		5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	IGSF8	Q969P0	613 aa		5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	PSKH2	Q96QS6	385 aa		5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	REXO4	Q9GZR2	422 aa	Known RBP	5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	TNKS2	Q9H2K2	1166 aa		5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	SLC32A1	Q9H598	525 aa		5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	MAGEE1	Q9HCI5	957 aa		5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	VNN3	Q9NY84	501 aa		5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	DNAJB9	Q9UBS3	223 aa		5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	VPS4A	Q9UN37	437 aa		5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	FCF1	Q9Y324	198 aa	Known RBP	5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	UGT2A1	Q9Y4X1	527 aa		5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	POLR3H	Q9Y535	204 aa	Predicted RBP	5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	MYO7A	Q13402	2215 aa		5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	PRRC2B	Q5JSZ5	2229 aa	Known RBP	5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	EFCAB9	A8MZ26	197 aa		5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	IFRD1	O00458	451 aa	Predicted RBP	5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	AP3D1	O14617	1153 aa		5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	CD3EAP	O15446	510 aa	Known RBP	5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	RECQL5	O94762	991 aa	Predicted RBP	5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	MLYCD	O95822	493 aa		5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	B3GALT4	O96024	378 aa		5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	ZNF7	P17097	686 aa	Predicted RBP	5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	GGT1	P19440	569 aa		5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	CSNK1D	P48730	415 aa		5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	PPP5C	P53041	499 aa		5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	DAB2	P98082	770 aa		5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	PTGR1	Q14914	329 aa		5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	SMUG1	Q53HV7	270 aa		5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	ARSI	Q5FYB1	569 aa		5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	SIRPB2	Q5JXA9	342 aa		5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	KDELC1	Q6UW63	502 aa		5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783		Q6ZSR9	355 aa		5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	CYP4Z1	Q86W10	505 aa		5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	BRSK1	Q8TDC3	778 aa		5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	HCAR2	Q8TDS4	363 aa		5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	ZNF300	Q96RE9	604 aa	Predicted RBP	5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	RBM4B	Q9BQ04	359 aa	Known RBP	5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	RBM4	Q9BWF3	364 aa	Known RBP	5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	SLIRP	Q9GZT3	109 aa	Known RBP	5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	CLPB	Q9H078	707 aa		5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	DCSTAMP	Q9H295	470 aa		5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	ZSCAN32	Q9NX65	697 aa		5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	STOML2	Q9UJZ1	356 aa		5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	CYP8B1	Q9UNU6	501 aa		5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	FAM234B	A2RU67	622 aa		5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	NOTO	A8MTQ0	251 aa		5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	TAF4	O00268	1085 aa		5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	KHNYN	O15037	678 aa	Known RBP	5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	FAM20B	O75063	409 aa		5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	UPK1B	O75841	260 aa		5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	EPO	P01588	193 aa		5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	VIPR1	P32241	457 aa		5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	CASP3	P42574	277 aa		5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	SOX9	P48436	509 aa		5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	CDKN1C	P49918	316 aa	Predicted RBP	5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	ST13	P50502	369 aa	Known RBP	5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	PHC1	P78364	1004 aa		5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	ILF3	Q12906	894 aa	Known RBP eCLIP	5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	CAMK2B	Q13554	666 aa		5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	NR6A1	Q15406	480 aa		5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	RFTN2	Q52LD8	501 aa	Predicted RBP	5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	ALF	Q53S48	1182 aa		5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	CCBE1	Q6UXH8	406 aa	Predicted RBP	5.49	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	AHSA2	Q719I0	299 aa		5.49	□□□□□ -1.53

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