RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 ELAVL2Q12926 359 aaKnown RBP12.21□□□□□ -0.45
DDX55-206ENST00000539934 SEMA3BQ13214 749 aa12.21□□□□□ -0.45
DDX55-206ENST00000539934 TOR1AIP1Q5JTV8 583 aa12.21□□□□□ -0.45
DDX55-206ENST00000539934 RAET1GQ6H3X3 334 aa12.21□□□□□ -0.45
DDX55-206ENST00000539934 ATG14Q6ZNE5 492 aa12.21□□□□□ -0.45
DDX55-206ENST00000539934 USP45Q70EL2 814 aa12.21□□□□□ -0.45
DDX55-206ENST00000539934 TMEM173Q86WV6 379 aaPredicted RBP12.21□□□□□ -0.45
DDX55-206ENST00000539934 KRT78Q8N1N4 520 aa12.21□□□□□ -0.45
DDX55-206ENST00000539934 POU5F2Q8N7G0 328 aa12.21□□□□□ -0.45
DDX55-206ENST00000539934 TDRD5Q8NAT2 981 aaKnown RBP12.21□□□□□ -0.45
DDX55-206ENST00000539934 DCUN1D1Q96GG9 259 aa12.21□□□□□ -0.45
DDX55-206ENST00000539934 KLHL15Q96M94 604 aa12.21□□□□□ -0.45
DDX55-206ENST00000539934 CNTNAP3BQ96NU0 1288 aa12.21□□□□□ -0.45
DDX55-206ENST00000539934 LENG8Q96PV6 779 aaPredicted RBP12.21□□□□□ -0.45
DDX55-206ENST00000539934 GCNAQ96QF7 691 aa12.21□□□□□ -0.45
DDX55-206ENST00000539934 SSX3Q99909 188 aa12.21□□□□□ -0.45
DDX55-206ENST00000539934 TMEM175Q9BSA9 504 aa12.21□□□□□ -0.45
DDX55-206ENST00000539934 CNTNAP3Q9BZ76 1288 aa12.21□□□□□ -0.45
DDX55-206ENST00000539934 MRPL37Q9BZE1 423 aaKnown RBP12.21□□□□□ -0.45
DDX55-206ENST00000539934 TGIF2Q9GZN2 237 aa12.21□□□□□ -0.45
DDX55-206ENST00000539934 NANOGQ9H9S0 305 aa12.21□□□□□ -0.45
DDX55-206ENST00000539934 TMEM216Q9P0N5 145 aa12.21□□□□□ -0.45
DDX55-206ENST00000539934 OR12D3Q9UGF7 316 aa12.21□□□□□ -0.45
DDX55-206ENST00000539934 LIPT1Q9Y234 373 aa12.21□□□□□ -0.45
DDX55-206ENST00000539934 KCNK7Q9Y2U2 307 aa12.21□□□□□ -0.45
DDX55-206ENST00000539934 NUP205Q92621 2012 aa12.21□□□□□ -0.46
DDX55-206ENST00000539934 LDLRAD4O15165 306 aa12.21□□□□□ -0.46
DDX55-206ENST00000539934 IRAK2O43187 625 aa12.21□□□□□ -0.46
DDX55-206ENST00000539934 NOL3O60936 208 aaKnown RBP12.21□□□□□ -0.46
DDX55-206ENST00000539934 BCL10O95999 233 aa12.21□□□□□ -0.46
DDX55-206ENST00000539934 FGF4P08620 206 aa12.21□□□□□ -0.46
DDX55-206ENST00000539934 TAC1P20366 129 aa12.21□□□□□ -0.46
DDX55-206ENST00000539934 FGFR3P22607 806 aa12.21□□□□□ -0.46
DDX55-206ENST00000539934 SSTR1P30872 391 aa12.21□□□□□ -0.46
DDX55-206ENST00000539934 GPR15P49685 360 aa12.21□□□□□ -0.46
DDX55-206ENST00000539934 SUCLG1P53597 346 aaKnown RBP12.21□□□□□ -0.46
DDX55-206ENST00000539934 ODF1Q14990 250 aa12.21□□□□□ -0.46
DDX55-206ENST00000539934 LIPIQ6XZB0 460 aa12.21□□□□□ -0.46
DDX55-206ENST00000539934 DPY19L3Q6ZPD9 716 aa12.21□□□□□ -0.46
DDX55-206ENST00000539934 FBXO27Q8NI29 283 aa12.21□□□□□ -0.46
DDX55-206ENST00000539934 EDARADDQ8WWZ3 215 aa12.21□□□□□ -0.46
DDX55-206ENST00000539934 ZBTB18Q99592 522 aa12.21□□□□□ -0.46
DDX55-206ENST00000539934 GSDMCQ9BYG8 508 aa12.21□□□□□ -0.46
DDX55-206ENST00000539934 BTBD1Q9H0C5 482 aa12.21□□□□□ -0.46
DDX55-206ENST00000539934 METTL9Q9H1A3 318 aa12.21□□□□□ -0.46
DDX55-206ENST00000539934 OR51B6Q9H340 312 aa12.21□□□□□ -0.46
DDX55-206ENST00000539934 FBXO44Q9H4M3 255 aa12.21□□□□□ -0.46
DDX55-206ENST00000539934 ADAMTS6Q9UKP5 1117 aa12.21□□□□□ -0.46
DDX55-206ENST00000539934 PCDHGA9Q9Y5G4 932 aaKnown RBP12.21□□□□□ -0.46
DDX55-206ENST00000539934 PCDHGA1Q9Y5H4 931 aa12.21□□□□□ -0.46
DDX55-206ENST00000539934 SNX10Q9Y5X0 201 aa12.21□□□□□ -0.46
DDX55-206ENST00000539934 A0A0A0MRY4 1105 aa12.2□□□□□ -0.46
DDX55-206ENST00000539934 A0A1W2PQH9 124 aa12.2□□□□□ -0.46
DDX55-206ENST00000539934 KRT87PA6NCN2 255 aa12.2□□□□□ -0.46
DDX55-206ENST00000539934 H3BNH8 94 aa12.2□□□□□ -0.46
DDX55-206ENST00000539934 METTL18O95568 372 aa12.2□□□□□ -0.46
DDX55-206ENST00000539934 LAG3P18627 525 aa12.2□□□□□ -0.46
DDX55-206ENST00000539934 LAP3P28838 519 aa12.2□□□□□ -0.46
DDX55-206ENST00000539934 ELK3P41970 407 aa12.2□□□□□ -0.46
DDX55-206ENST00000539934 IFITM3Q01628 133 aa12.2□□□□□ -0.46
DDX55-206ENST00000539934 TMED2Q15363 201 aa12.2□□□□□ -0.46
DDX55-206ENST00000539934 TRIP10Q15642 601 aa12.2□□□□□ -0.46
DDX55-206ENST00000539934 Q5BKY6 102 aa12.2□□□□□ -0.46
DDX55-206ENST00000539934 LRFN4Q6PJG9 635 aa12.2□□□□□ -0.46
DDX55-206ENST00000539934 VN1R5Q7Z5H4 357 aa12.2□□□□□ -0.46
DDX55-206ENST00000539934 TMPRSS6Q8IU80 811 aa12.2□□□□□ -0.46
DDX55-206ENST00000539934 MRPL43Q8N983 215 aaKnown RBP12.2□□□□□ -0.46
DDX55-206ENST00000539934 PROX1Q92786 737 aa12.2□□□□□ -0.46
DDX55-206ENST00000539934 RFT1Q96AA3 541 aa12.2□□□□□ -0.46
DDX55-206ENST00000539934 P2RY11Q96G91 374 aa12.2□□□□□ -0.46
DDX55-206ENST00000539934 SPATA13Q96N96 652 aa12.2□□□□□ -0.46
DDX55-206ENST00000539934 OR5M11Q96RB7 305 aa12.2□□□□□ -0.46
DDX55-206ENST00000539934 NPAS1Q99742 590 aa12.2□□□□□ -0.46
DDX55-206ENST00000539934 SIK2Q9H0K1 926 aa12.2□□□□□ -0.46
DDX55-206ENST00000539934 GLOD4Q9HC38 313 aa12.2□□□□□ -0.46
DDX55-206ENST00000539934 PLSCR3Q9NRY6 295 aa12.2□□□□□ -0.46
DDX55-206ENST00000539934 LGALS13Q9UHV8 139 aa12.2□□□□□ -0.46
DDX55-206ENST00000539934 NUDT5Q9UKK9 219 aa12.2□□□□□ -0.46
DDX55-206ENST00000539934 ARHGEF9O43307 516 aa12.19□□□□□ -0.46
DDX55-206ENST00000539934 PRKRAO75569 313 aaKnown RBP12.19□□□□□ -0.46
DDX55-206ENST00000539934 LRIG2O94898 1065 aa12.19□□□□□ -0.46
DDX55-206ENST00000539934 CXCL14O95715 111 aa12.19□□□□□ -0.46
DDX55-206ENST00000539934 PTTG1O95997 202 aa12.19□□□□□ -0.46
DDX55-206ENST00000539934 IGLV3-25P01717 112 aa12.19□□□□□ -0.46
DDX55-206ENST00000539934 CBR1P16152 277 aa12.19□□□□□ -0.46
DDX55-206ENST00000539934 GLUD2P49448 558 aa12.19□□□□□ -0.46
DDX55-206ENST00000539934 NDST2P52849 883 aa12.19□□□□□ -0.46
DDX55-206ENST00000539934 PSPHP78330 225 aa12.19□□□□□ -0.46
DDX55-206ENST00000539934 BTN1A1Q13410 526 aa12.19□□□□□ -0.46
DDX55-206ENST00000539934 DYRK1AQ13627 763 aa12.19□□□□□ -0.46
DDX55-206ENST00000539934 MGAT5BQ3V5L5 792 aa12.19□□□□□ -0.46
DDX55-206ENST00000539934 SGO1Q5FBB7 561 aa12.19□□□□□ -0.46
DDX55-206ENST00000539934 ARMCX4Q5H9R4 360 aa12.19□□□□□ -0.46
DDX55-206ENST00000539934 GPR139Q6DWJ6 353 aa12.19□□□□□ -0.46
DDX55-206ENST00000539934 DENND5BQ6ZUT9 1274 aa12.19□□□□□ -0.46
DDX55-206ENST00000539934 SCD5Q86SK9 330 aa12.19□□□□□ -0.46
DDX55-206ENST00000539934 MON1AQ86VX9 555 aa12.19□□□□□ -0.46
DDX55-206ENST00000539934 PSMA8Q8TAA3 256 aa12.19□□□□□ -0.46
DDX55-206ENST00000539934 ZFAND1Q8TCF1 268 aa12.19□□□□□ -0.46
DDX55-206ENST00000539934 CNBD2Q96M20 576 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms