RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 OR6Y1Q8NGX8 325 aa14.78□□□□□ -0.04
DDB1-216ENST00000539739 THAP11Q96EK4 314 aa14.78□□□□□ -0.04
DDB1-216ENST00000539739 LIN37Q96GY3 246 aaPredicted RBP14.78□□□□□ -0.04
DDB1-216ENST00000539739 ANKRD27Q96NW4 1050 aa14.78□□□□□ -0.04
DDB1-216ENST00000539739 CDK15Q96Q40 435 aa14.78□□□□□ -0.04
DDB1-216ENST00000539739 NT5DC2Q9H857 520 aa14.78□□□□□ -0.04
DDB1-216ENST00000539739 PRM3Q9NNZ6 103 aa14.78□□□□□ -0.04
DDB1-216ENST00000539739 FAM60AQ9NP50 221 aa14.78□□□□□ -0.04
DDB1-216ENST00000539739 KNTC1P50748 2209 aa14.78□□□□□ -0.04
DDB1-216ENST00000539739 SNRNP200O75643 2136 aaKnown RBP14.78□□□□□ -0.04
DDB1-216ENST00000539739 A0A0J9YVX5 310 aa14.77□□□□□ -0.04
DDB1-216ENST00000539739 FEZF1A0PJY2 475 aa14.77□□□□□ -0.04
DDB1-216ENST00000539739 OR1F1O43749 312 aa14.77□□□□□ -0.04
DDB1-216ENST00000539739 CTSVO60911 334 aa14.77□□□□□ -0.04
DDB1-216ENST00000539739 CRCPO75575 148 aa14.77□□□□□ -0.04
DDB1-216ENST00000539739 ESRRBO95718 433 aa14.77□□□□□ -0.04
DDB1-216ENST00000539739 HSPA4LO95757 839 aa14.77□□□□□ -0.04
DDB1-216ENST00000539739 SLC1A6P48664 564 aa14.77□□□□□ -0.04
DDB1-216ENST00000539739 ABCE1P61221 599 aaKnown RBP14.77□□□□□ -0.04
DDB1-216ENST00000539739 SH3BP2P78314 561 aa14.77□□□□□ -0.04
DDB1-216ENST00000539739 EIF3IQ13347 325 aaKnown RBP14.77□□□□□ -0.04
DDB1-216ENST00000539739 C16orf72Q14CZ0 275 aa14.77□□□□□ -0.04
DDB1-216ENST00000539739 CPSF6Q16630 551 aaKnown RBP eCLIP14.77□□□□□ -0.04
DDB1-216ENST00000539739 GGTA1PQ4G0N0 100 aa14.77□□□□□ -0.04
DDB1-216ENST00000539739 ARL13AQ5H913 290 aaPredicted RBP14.77□□□□□ -0.04
DDB1-216ENST00000539739 FBXO42Q6P3S6 717 aa14.77□□□□□ -0.04
DDB1-216ENST00000539739 TMIGD1Q6UXZ0 262 aa14.77□□□□□ -0.04
DDB1-216ENST00000539739 RNF44Q7L0R7 432 aa14.77□□□□□ -0.04
DDB1-216ENST00000539739 SYVN1Q86TM6 617 aa14.77□□□□□ -0.04
DDB1-216ENST00000539739 DNAJC22Q8N4W6 341 aa14.77□□□□□ -0.04
DDB1-216ENST00000539739 TTLQ8NG68 377 aa14.77□□□□□ -0.04
DDB1-216ENST00000539739 LRRC8CQ8TDW0 803 aa14.77□□□□□ -0.04
DDB1-216ENST00000539739 AGAP11Q8TF27 550 aa14.77□□□□□ -0.04
DDB1-216ENST00000539739 ZNF75CPQ92670 426 aaPredicted RBP14.77□□□□□ -0.04
DDB1-216ENST00000539739 RERGQ96A58 199 aaPredicted RBP14.77□□□□□ -0.04
DDB1-216ENST00000539739 REPS1Q96D71 796 aa14.77□□□□□ -0.04
DDB1-216ENST00000539739 SARGQ9BW04 601 aa14.77□□□□□ -0.04
DDB1-216ENST00000539739 TRPS1Q9UHF7 1281 aa14.77□□□□□ -0.04
DDB1-216ENST00000539739 PILRAQ9UKJ1 303 aa14.77□□□□□ -0.04
DDB1-216ENST00000539739 PLCL2Q9UPR0 1127 aa14.77□□□□□ -0.04
DDB1-216ENST00000539739 RNF11Q9Y3C5 154 aa14.77□□□□□ -0.04
DDB1-216ENST00000539739 PCDHGA11Q9Y5H2 935 aa14.77□□□□□ -0.04
DDB1-216ENST00000539739 HEATR5BQ9P2D3 2071 aa14.77□□□□□ -0.04
DDB1-216ENST00000539739 EFCAB7A8K855 629 aa14.77□□□□□ -0.05
DDB1-216ENST00000539739 AGRPO00253 132 aa14.77□□□□□ -0.05
DDB1-216ENST00000539739 KLF11O14901 512 aa14.77□□□□□ -0.05
DDB1-216ENST00000539739 ZSCAN9O15535 394 aaPredicted RBP14.77□□□□□ -0.05
DDB1-216ENST00000539739 NRP2O60462 931 aa14.77□□□□□ -0.05
DDB1-216ENST00000539739 SRPX2O60687 465 aaPredicted RBP14.77□□□□□ -0.05
DDB1-216ENST00000539739 OR4F21O95013 312 aa14.77□□□□□ -0.05
DDB1-216ENST00000539739 ENO1P06733 434 aaKnown RBP14.77□□□□□ -0.05
DDB1-216ENST00000539739 MSL3P1P0C860 447 aa14.77□□□□□ -0.05
DDB1-216ENST00000539739 HGFP14210 728 aa14.77□□□□□ -0.05
DDB1-216ENST00000539739 CD22P20273 847 aa14.77□□□□□ -0.05
DDB1-216ENST00000539739 CCR10P46092 362 aa14.77□□□□□ -0.05
DDB1-216ENST00000539739 ERVPABLB-1P60509 514 aa14.77□□□□□ -0.05
DDB1-216ENST00000539739 CYP4F3Q08477 520 aa14.77□□□□□ -0.05
DDB1-216ENST00000539739 BST1Q10588 318 aa14.77□□□□□ -0.05
DDB1-216ENST00000539739 TARDBPQ13148 414 aaKnown RBP eCLIP14.77□□□□□ -0.05
DDB1-216ENST00000539739 KCNAB1Q14722 419 aa14.77□□□□□ -0.05
DDB1-216ENST00000539739 LETMD1Q6P1Q0 360 aa14.77□□□□□ -0.05
DDB1-216ENST00000539739 MED27Q6P2C8 311 aa14.77□□□□□ -0.05
DDB1-216ENST00000539739 CUZD1Q86UP6 607 aa14.77□□□□□ -0.05
DDB1-216ENST00000539739 PLD3Q8IV08 490 aa14.77□□□□□ -0.05
DDB1-216ENST00000539739 MCATQ8IVS2 390 aaKnown RBP14.77□□□□□ -0.05
DDB1-216ENST00000539739 ZNF740Q8NDX6 193 aa14.77□□□□□ -0.05
DDB1-216ENST00000539739 FAM81AQ8TBF8 368 aa14.77□□□□□ -0.05
DDB1-216ENST00000539739 THAP1Q9NVV9 213 aa14.77□□□□□ -0.05
DDB1-216ENST00000539739 LOXL2Q9Y4K0 774 aa14.77□□□□□ -0.05
DDB1-216ENST00000539739 KCNE1BA0A087WTH5 132 aa14.76□□□□□ -0.05
DDB1-216ENST00000539739 CCDC187A0A096LP49 1063 aa14.76□□□□□ -0.05
DDB1-216ENST00000539739 ANKDD1BA6NHY2 528 aa14.76□□□□□ -0.05
DDB1-216ENST00000539739 H0YIV9 168 aa14.76□□□□□ -0.05
DDB1-216ENST00000539739 UBFD1O14562 309 aaKnown RBP14.76□□□□□ -0.05
DDB1-216ENST00000539739 FOLR1P15328 257 aa14.76□□□□□ -0.05
DDB1-216ENST00000539739 GSTM2P28161 218 aa14.76□□□□□ -0.05
DDB1-216ENST00000539739 HMOX2P30519 316 aa14.76□□□□□ -0.05
DDB1-216ENST00000539739 AHRP35869 848 aa14.76□□□□□ -0.05
DDB1-216ENST00000539739 BCL6P41182 706 aa14.76□□□□□ -0.05
DDB1-216ENST00000539739 SCTRP47872 440 aa14.76□□□□□ -0.05
DDB1-216ENST00000539739 ID4P47928 161 aa14.76□□□□□ -0.05
DDB1-216ENST00000539739 PHEXP78562 749 aa14.76□□□□□ -0.05
DDB1-216ENST00000539739 ACTN3Q08043 901 aaPredicted RBP14.76□□□□□ -0.05
DDB1-216ENST00000539739 FOXM1Q08050 763 aa14.76□□□□□ -0.05
DDB1-216ENST00000539739 TUBB3Q13509 450 aa14.76□□□□□ -0.05
DDB1-216ENST00000539739 DEFB110Q30KQ9 67 aa14.76□□□□□ -0.05
DDB1-216ENST00000539739 RAB11FIP2Q7L804 512 aa14.76□□□□□ -0.05
DDB1-216ENST00000539739 TMPRSS7Q7RTY8 843 aa14.76□□□□□ -0.05
DDB1-216ENST00000539739 KIRREL3Q8IZU9 778 aa14.76□□□□□ -0.05
DDB1-216ENST00000539739 LSMEM2Q8N112 164 aa14.76□□□□□ -0.05
DDB1-216ENST00000539739 CHCHD4Q8N4Q1 142 aa14.76□□□□□ -0.05
DDB1-216ENST00000539739 ZNF655Q8N720 491 aaPredicted RBP14.76□□□□□ -0.05
DDB1-216ENST00000539739 CDYL2Q8N8U2 506 aa14.76□□□□□ -0.05
DDB1-216ENST00000539739 MFSD9Q8NBP5 474 aa14.76□□□□□ -0.05
DDB1-216ENST00000539739 METTL6Q8TCB7 284 aa14.76□□□□□ -0.05
DDB1-216ENST00000539739 CKAP2Q8WWK9 683 aa14.76□□□□□ -0.05
DDB1-216ENST00000539739 SPDL1Q96EA4 605 aa14.76□□□□□ -0.05
DDB1-216ENST00000539739 SEC16BQ96JE7 1060 aa14.76□□□□□ -0.05
DDB1-216ENST00000539739 MAGEB18Q96M61 343 aa14.76□□□□□ -0.05
DDB1-216ENST00000539739 FCRL4Q96PJ5 515 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms