RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 PIM1P11309 404 aaPredicted RBP13.04□□□□□ -0.32
CD9-208ENST00000538834 CNTFP26441 200 aa13.04□□□□□ -0.32
CD9-208ENST00000538834 AHRP35869 848 aa13.04□□□□□ -0.32
CD9-208ENST00000538834 CASP2P42575 452 aa13.04□□□□□ -0.32
CD9-208ENST00000538834 GDF5P43026 501 aa13.04□□□□□ -0.32
CD9-208ENST00000538834 SCTRP47872 440 aa13.04□□□□□ -0.32
CD9-208ENST00000538834 CCR8P51685 355 aa13.04□□□□□ -0.32
CD9-208ENST00000538834 PMS2P54278 862 aa13.04□□□□□ -0.32
CD9-208ENST00000538834 SOX8P57073 446 aa13.04□□□□□ -0.32
CD9-208ENST00000538834 IRF9Q00978 393 aa13.04□□□□□ -0.32
CD9-208ENST00000538834 HYAL2Q12891 473 aa13.04□□□□□ -0.32
CD9-208ENST00000538834 TSTA3Q13630 321 aaPredicted RBP13.04□□□□□ -0.32
CD9-208ENST00000538834 LY6DQ14210 128 aa13.04□□□□□ -0.32
CD9-208ENST00000538834 ACAP2Q15057 778 aa13.04□□□□□ -0.32
CD9-208ENST00000538834 C16orf46Q6P387 395 aa13.04□□□□□ -0.32
CD9-208ENST00000538834 NXPE4Q6UWF7 544 aa13.04□□□□□ -0.32
CD9-208ENST00000538834 TIFABQ6ZNK6 161 aa13.04□□□□□ -0.32
CD9-208ENST00000538834 MED25Q71SY5 747 aa13.04□□□□□ -0.32
CD9-208ENST00000538834 GPSM1Q86YR5 675 aa13.04□□□□□ -0.32
CD9-208ENST00000538834 PLD6Q8N2A8 252 aaKnown RBP13.04□□□□□ -0.32
CD9-208ENST00000538834 ANKRD53Q8N9V6 530 aa13.04□□□□□ -0.32
CD9-208ENST00000538834 ZNF740Q8NDX6 193 aa13.04□□□□□ -0.32
CD9-208ENST00000538834 STAG3L4Q8TBR4 150 aa13.04□□□□□ -0.32
CD9-208ENST00000538834 UBTD2Q8WUN7 234 aa13.04□□□□□ -0.32
CD9-208ENST00000538834 KCTD4Q8WVF5 259 aa13.04□□□□□ -0.32
CD9-208ENST00000538834 APOBEC4Q8WW27 367 aaKnown RBP13.04□□□□□ -0.32
CD9-208ENST00000538834 SLC5A11Q8WWX8 675 aa13.04□□□□□ -0.32
CD9-208ENST00000538834 SLC7A5P2Q9GIP4 190 aa13.04□□□□□ -0.32
CD9-208ENST00000538834 AICDAQ9GZX7 198 aa13.04□□□□□ -0.32
CD9-208ENST00000538834 EHD1Q9H4M9 534 aa13.04□□□□□ -0.32
CD9-208ENST00000538834 NT5DC2Q9H857 520 aa13.04□□□□□ -0.32
CD9-208ENST00000538834 ZNF304Q9HCX3 659 aa13.04□□□□□ -0.32
CD9-208ENST00000538834 GPRC5BQ9NZH0 403 aa13.04□□□□□ -0.32
CD9-208ENST00000538834 ASB1Q9Y576 335 aa13.04□□□□□ -0.32
CD9-208ENST00000538834 SLC22A7Q9Y694 548 aa13.04□□□□□ -0.32
CD9-208ENST00000538834 ZNF462Q96JM2 2506 aa13.04□□□□□ -0.32
CD9-208ENST00000538834 HELZ2Q9BYK8 2649 aaKnown RBP13.03□□□□□ -0.32
CD9-208ENST00000538834 A0A096LPK6 155 aa13.03□□□□□ -0.32
CD9-208ENST00000538834 FEZF1A0PJY2 475 aa13.03□□□□□ -0.32
CD9-208ENST00000538834 CDC14CA4D256 554 aa13.03□□□□□ -0.32
CD9-208ENST00000538834 C9J4A7 227 aa13.03□□□□□ -0.32
CD9-208ENST00000538834 MAP2K7O14733 419 aa13.03□□□□□ -0.32
CD9-208ENST00000538834 IPO13O94829 963 aaKnown RBP13.03□□□□□ -0.32
CD9-208ENST00000538834 TFEBP19484 476 aa13.03□□□□□ -0.32
CD9-208ENST00000538834 ALAS2P22557 587 aa13.03□□□□□ -0.32
CD9-208ENST00000538834 CCR10P46092 362 aa13.03□□□□□ -0.32
CD9-208ENST00000538834 OR1D4P47884 311 aa13.03□□□□□ -0.32
CD9-208ENST00000538834 SERPINB8P50452 374 aa13.03□□□□□ -0.32
CD9-208ENST00000538834 POLE2P56282 527 aa13.03□□□□□ -0.32
CD9-208ENST00000538834 FOXL2P58012 376 aa13.03□□□□□ -0.32
CD9-208ENST00000538834 PWP1Q13610 501 aa13.03□□□□□ -0.32
CD9-208ENST00000538834 DSG2Q14126 1118 aa13.03□□□□□ -0.32
CD9-208ENST00000538834 SLC9A5Q14940 896 aa13.03□□□□□ -0.32
CD9-208ENST00000538834 DEFB109BQ30KR1 87 aa13.03□□□□□ -0.32
CD9-208ENST00000538834 ATG9BQ674R7 924 aa13.03□□□□□ -0.32
CD9-208ENST00000538834 ZNF843Q8N446 348 aa13.03□□□□□ -0.32
CD9-208ENST00000538834 NT5CQ8TCD5 201 aa13.03□□□□□ -0.32
CD9-208ENST00000538834 CREB3L4Q8TEY5 395 aa13.03□□□□□ -0.32
CD9-208ENST00000538834 MZB1Q8WU39 189 aa13.03□□□□□ -0.32
CD9-208ENST00000538834 PITHD1Q9GZP4 211 aaPredicted RBP13.03□□□□□ -0.32
CD9-208ENST00000538834 IFT80Q9P2H3 777 aaPredicted RBP13.03□□□□□ -0.32
CD9-208ENST00000538834 ZFP69BQ9UJL9 534 aa13.03□□□□□ -0.32
CD9-208ENST00000538834 PADI2Q9Y2J8 665 aa13.03□□□□□ -0.32
CD9-208ENST00000538834 KCNE2Q9Y6J6 123 aa13.03□□□□□ -0.32
CD9-208ENST00000538834 H0YIG0 161 aa13.02□□□□□ -0.33
CD9-208ENST00000538834 RFPL1O75677 317 aa13.02□□□□□ -0.33
CD9-208ENST00000538834 WFS1O76024 890 aa13.02□□□□□ -0.33
CD9-208ENST00000538834 NSA2O95478 260 aaKnown RBP13.02□□□□□ -0.33
CD9-208ENST00000538834 EIF2S1P05198 315 aaKnown RBP13.02□□□□□ -0.33
CD9-208ENST00000538834 SBK3P0C264 359 aa13.02□□□□□ -0.33
CD9-208ENST00000538834 FAM87AP0C7U9 286 aa13.02□□□□□ -0.33
CD9-208ENST00000538834 C1GALT1C1LP0DN25 315 aa13.02□□□□□ -0.33
CD9-208ENST00000538834 SFTPCP11686 197 aa13.02□□□□□ -0.33
CD9-208ENST00000538834 COL6A2P12110 1019 aa13.02□□□□□ -0.33
CD9-208ENST00000538834 GNAZP19086 355 aa13.02□□□□□ -0.33
CD9-208ENST00000538834 CD22P20273 847 aa13.02□□□□□ -0.33
CD9-208ENST00000538834 MMP11P24347 488 aa13.02□□□□□ -0.33
CD9-208ENST00000538834 EFNA3P52797 238 aa13.02□□□□□ -0.33
CD9-208ENST00000538834 COL9A2Q14055 689 aaPredicted RBP13.02□□□□□ -0.33
CD9-208ENST00000538834 SLC29A2Q14542 456 aa13.02□□□□□ -0.33
CD9-208ENST00000538834 TBCCQ15814 346 aa13.02□□□□□ -0.33
CD9-208ENST00000538834 TECRLQ5HYJ1 363 aa13.02□□□□□ -0.33
CD9-208ENST00000538834 MLIPQ5VWP3 458 aa13.02□□□□□ -0.33
CD9-208ENST00000538834 SH2D5Q6ZV89 423 aa13.02□□□□□ -0.33
CD9-208ENST00000538834 PPP1R32Q7Z5V6 425 aa13.02□□□□□ -0.33
CD9-208ENST00000538834 TBC1D1Q86TI0 1168 aaPredicted RBP13.02□□□□□ -0.33
CD9-208ENST00000538834 KCT2Q8NC54 265 aa13.02□□□□□ -0.33
CD9-208ENST00000538834 CAMKVQ8NCB2 501 aa13.02□□□□□ -0.33
CD9-208ENST00000538834 RERGQ96A58 199 aaPredicted RBP13.02□□□□□ -0.33
CD9-208ENST00000538834 MOCOSQ96EN8 888 aa13.02□□□□□ -0.33
CD9-208ENST00000538834 SEC16BQ96JE7 1060 aa13.02□□□□□ -0.33
CD9-208ENST00000538834 IP6K3Q96PC2 410 aa13.02□□□□□ -0.33
CD9-208ENST00000538834 CAPS2Q9BXY5 557 aa13.02□□□□□ -0.33
CD9-208ENST00000538834 TRIM55Q9BYV6 548 aa13.02□□□□□ -0.33
CD9-208ENST00000538834 CD244Q9BZW8 370 aa13.02□□□□□ -0.33
CD9-208ENST00000538834 SLC6A16Q9GZN6 736 aa13.02□□□□□ -0.33
CD9-208ENST00000538834 ALG9Q9H6U8 611 aa13.02□□□□□ -0.33
CD9-208ENST00000538834 ABCF3Q9NUQ8 709 aa13.02□□□□□ -0.33
CD9-208ENST00000538834 NUDT4Q9NZJ9 180 aa13.02□□□□□ -0.33
CD9-208ENST00000538834 CTSFQ9UBX1 484 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms