RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 PYCR2Q96C36 320 aa14.21□□□□□ -0.13
RAB40B-202ENST00000538809 C19orf60Q96EN9 201 aa14.21□□□□□ -0.13
RAB40B-202ENST00000538809 PDLIM5Q96HC4 596 aaKnown RBP14.21□□□□□ -0.13
RAB40B-202ENST00000538809 THOC3Q96J01 351 aaKnown RBP14.21□□□□□ -0.13
RAB40B-202ENST00000538809 SGPP1Q9BX95 441 aa14.21□□□□□ -0.13
RAB40B-202ENST00000538809 PHACTR1Q9C0D0 580 aa14.21□□□□□ -0.13
RAB40B-202ENST00000538809 ARL15Q9NXU5 204 aa14.21□□□□□ -0.13
RAB40B-202ENST00000538809 SPTAN1Q13813 2472 aaKnown RBP14.21□□□□□ -0.13
RAB40B-202ENST00000538809 PABPN1LA6NDY0 278 aaKnown RBP14.2□□□□□ -0.14
RAB40B-202ENST00000538809 TXNDC9O14530 226 aa14.2□□□□□ -0.14
RAB40B-202ENST00000538809 KLHL41O60662 606 aa14.2□□□□□ -0.14
RAB40B-202ENST00000538809 WISP3O95389 354 aaPredicted RBP14.2□□□□□ -0.14
RAB40B-202ENST00000538809 GUCA1CO95843 209 aa14.2□□□□□ -0.14
RAB40B-202ENST00000538809 HPP00738 406 aa14.2□□□□□ -0.14
RAB40B-202ENST00000538809 ZNF37AP17032 561 aaPredicted RBP14.2□□□□□ -0.14
RAB40B-202ENST00000538809 IL1RNP18510 177 aa14.2□□□□□ -0.14
RAB40B-202ENST00000538809 SLC26A3P40879 764 aa14.2□□□□□ -0.14
RAB40B-202ENST00000538809 BCL6P41182 706 aa14.2□□□□□ -0.14
RAB40B-202ENST00000538809 EFNA3P52797 238 aa14.2□□□□□ -0.14
RAB40B-202ENST00000538809 EMP2P54851 167 aa14.2□□□□□ -0.14
RAB40B-202ENST00000538809 RPS15AP62244 130 aaKnown RBP14.2□□□□□ -0.14
RAB40B-202ENST00000538809 MEF2AQ02078 507 aaPredicted RBP14.2□□□□□ -0.14
RAB40B-202ENST00000538809 CALCOCO2Q13137 446 aa14.2□□□□□ -0.14
RAB40B-202ENST00000538809 MRPL49Q13405 166 aaKnown RBP14.2□□□□□ -0.14
RAB40B-202ENST00000538809 ZNF460Q14592 562 aa14.2□□□□□ -0.14
RAB40B-202ENST00000538809 PPP1R3AQ16821 1122 aa14.2□□□□□ -0.14
RAB40B-202ENST00000538809 IRAK1BP1Q5VVH5 260 aa14.2□□□□□ -0.14
RAB40B-202ENST00000538809 LCTLQ6UWM7 567 aa14.2□□□□□ -0.14
RAB40B-202ENST00000538809 SBSNQ6UWP8 590 aa14.2□□□□□ -0.14
RAB40B-202ENST00000538809 ZDHHC24Q6UX98 284 aa14.2□□□□□ -0.14
RAB40B-202ENST00000538809 IGFL3Q6UXB1 125 aa14.2□□□□□ -0.14
RAB40B-202ENST00000538809 CYS1Q717R9 158 aa14.2□□□□□ -0.14
RAB40B-202ENST00000538809 STRA8Q7Z7C7 330 aa14.2□□□□□ -0.14
RAB40B-202ENST00000538809 CUZD1Q86UP6 607 aa14.2□□□□□ -0.14
RAB40B-202ENST00000538809 ZC3H7AQ8IWR0 971 aaKnown RBP14.2□□□□□ -0.14
RAB40B-202ENST00000538809 IQCKQ8N0W5 287 aa14.2□□□□□ -0.14
RAB40B-202ENST00000538809 CISD2Q8N5K1 135 aaKnown RBP14.2□□□□□ -0.14
RAB40B-202ENST00000538809 TM9SF4Q92544 642 aa14.2□□□□□ -0.14
RAB40B-202ENST00000538809 VPS50Q96JG6 964 aa14.2□□□□□ -0.14
RAB40B-202ENST00000538809 LHPPQ9H008 270 aa14.2□□□□□ -0.14
RAB40B-202ENST00000538809 PCBD2Q9H0N5 130 aa14.2□□□□□ -0.14
RAB40B-202ENST00000538809 MKKSQ9NPJ1 570 aaPredicted RBP14.2□□□□□ -0.14
RAB40B-202ENST00000538809 C14orf105Q9NVL8 296 aa14.2□□□□□ -0.14
RAB40B-202ENST00000538809 FAM95CA0A1B0GW59 222 aa14.19□□□□□ -0.14
RAB40B-202ENST00000538809 JRKO75564 520 aa14.19□□□□□ -0.14
RAB40B-202ENST00000538809 PIAS1O75925 651 aa14.19□□□□□ -0.14
RAB40B-202ENST00000538809 HEXBP07686 556 aa14.19□□□□□ -0.14
RAB40B-202ENST00000538809 HIST1H2AGP0C0S8 130 aaPredicted RBP14.19□□□□□ -0.14
RAB40B-202ENST00000538809 COX6A1P12074 109 aa14.19□□□□□ -0.14
RAB40B-202ENST00000538809 HIST1H2ADP20671 130 aa14.19□□□□□ -0.14
RAB40B-202ENST00000538809 HRH2P25021 359 aa14.19□□□□□ -0.14
RAB40B-202ENST00000538809 SSTR1P30872 391 aa14.19□□□□□ -0.14
RAB40B-202ENST00000538809 AP1S2P56377 157 aa14.19□□□□□ -0.14
RAB40B-202ENST00000538809 TAS2R39P59534 338 aa14.19□□□□□ -0.14
RAB40B-202ENST00000538809 TRADDQ15628 312 aa14.19□□□□□ -0.14
RAB40B-202ENST00000538809 NDUFA9Q16795 377 aa14.19□□□□□ -0.14
RAB40B-202ENST00000538809 AGAP7PQ5VUJ5 663 aa14.19□□□□□ -0.14
RAB40B-202ENST00000538809 CAPN13Q6MZZ7 669 aaPredicted RBP14.19□□□□□ -0.14
RAB40B-202ENST00000538809 AMER2Q8N7J2 671 aa14.19□□□□□ -0.14
RAB40B-202ENST00000538809 OR56A3Q8NH54 315 aa14.19□□□□□ -0.14
RAB40B-202ENST00000538809 PYROXD1Q8WU10 500 aa14.19□□□□□ -0.14
RAB40B-202ENST00000538809 SNRNP40Q96DI7 357 aaKnown RBP14.19□□□□□ -0.14
RAB40B-202ENST00000538809 HIST1H2AHQ96KK5 128 aa14.19□□□□□ -0.14
RAB40B-202ENST00000538809 CNDP1Q96KN2 507 aa14.19□□□□□ -0.14
RAB40B-202ENST00000538809 AGAP4Q96P64 663 aa14.19□□□□□ -0.14
RAB40B-202ENST00000538809 HIST1H2AJQ99878 128 aa14.19□□□□□ -0.14
RAB40B-202ENST00000538809 WDR77Q9BQA1 342 aaPredicted RBP14.19□□□□□ -0.14
RAB40B-202ENST00000538809 H2AFJQ9BTM1 129 aa14.19□□□□□ -0.14
RAB40B-202ENST00000538809 SLC29A3Q9BZD2 475 aa14.19□□□□□ -0.14
RAB40B-202ENST00000538809 RHOJQ9H4E5 214 aa14.19□□□□□ -0.14
RAB40B-202ENST00000538809 SAYSD1Q9NPB0 183 aa14.19□□□□□ -0.14
RAB40B-202ENST00000538809 ASF1BQ9NVP2 202 aa14.19□□□□□ -0.14
RAB40B-202ENST00000538809 NSMCE4AQ9NXX6 385 aa14.19□□□□□ -0.14
RAB40B-202ENST00000538809 HCN3Q9P1Z3 774 aa14.19□□□□□ -0.14
RAB40B-202ENST00000538809 USP9YO00507 2555 aaPredicted RBP14.18□□□□□ -0.14
RAB40B-202ENST00000538809 KCNE1BA0A087WTH5 132 aa14.18□□□□□ -0.14
RAB40B-202ENST00000538809 NSG1A0A0A6YYJ2 146 aa14.18□□□□□ -0.14
RAB40B-202ENST00000538809 NPEPPSL1A6NEC2 478 aa14.18□□□□□ -0.14
RAB40B-202ENST00000538809 CXorf49A8MYA2 514 aaPredicted RBP14.18□□□□□ -0.14
RAB40B-202ENST00000538809 TCP11X1B4DZS4 312 aa14.18□□□□□ -0.14
RAB40B-202ENST00000538809 LCMT2O60294 686 aaKnown RBP14.18□□□□□ -0.14
RAB40B-202ENST00000538809 CELA2AP08217 269 aa14.18□□□□□ -0.14
RAB40B-202ENST00000538809 ENO2P09104 434 aaPredicted RBP14.18□□□□□ -0.14
RAB40B-202ENST00000538809 NPPBP16860 134 aa14.18□□□□□ -0.14
RAB40B-202ENST00000538809 CCND1P24385 295 aa14.18□□□□□ -0.14
RAB40B-202ENST00000538809 CXCR2P25025 360 aa14.18□□□□□ -0.14
RAB40B-202ENST00000538809 AVPR1BP47901 424 aa14.18□□□□□ -0.14
RAB40B-202ENST00000538809 GPX6P59796 221 aa14.18□□□□□ -0.14
RAB40B-202ENST00000538809 FAM53BQ14153 422 aa14.18□□□□□ -0.14
RAB40B-202ENST00000538809 MFSD4BQ5TF39 518 aa14.18□□□□□ -0.14
RAB40B-202ENST00000538809 ATG9BQ674R7 924 aa14.18□□□□□ -0.14
RAB40B-202ENST00000538809 LINC00696Q6ZRV3 163 aa14.18□□□□□ -0.14
RAB40B-202ENST00000538809 Q6ZS92 163 aa14.18□□□□□ -0.14
RAB40B-202ENST00000538809 ASPGQ86U10 573 aa14.18□□□□□ -0.14
RAB40B-202ENST00000538809 CEP97Q8IW35 865 aa14.18□□□□□ -0.14
RAB40B-202ENST00000538809 KCT2Q8NC54 265 aa14.18□□□□□ -0.14
RAB40B-202ENST00000538809 FBXO25Q8TCJ0 367 aa14.18□□□□□ -0.14
RAB40B-202ENST00000538809 PPP4R1Q8TF05 950 aa14.18□□□□□ -0.14
RAB40B-202ENST00000538809 ANKRD7Q92527 254 aa14.18□□□□□ -0.14
RAB40B-202ENST00000538809 FBXL8Q96CD0 374 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms